Larimichthys crocea (large yellow croaker): 104936606
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Entry
104936606 CDS
T04659
Symbol
wdr18
Name
(RefSeq) WD repeat-containing protein 18 isoform X1
KO
K14829
pre-rRNA-processing protein IPI3
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lco03009
]
104936606 (wdr18)
Ribosome biogenesis [BR:
lco03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
104936606 (wdr18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_alt
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_CAF1B_HIR1
NBCH_WD40
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_TEP1_C
WDR55
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_NWD2_C
Beta-prop_VPS8
Beta-prop_WDR75_2nd
Ge1_WD40
Beta-prop_Nup120_160
WDR54
Beta-prop_IP5PC_F
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
104936606
NCBI-ProteinID:
XP_019132584
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All DBs
Position
XIV:complement(12447438..12462286)
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AA seq
430 aa
AA seq
DB search
MAAPLEVIVSSDSGSQLWNSTVFDLHSGSSLLSYRGGNSSARTLTVLGGQYLLSAQLGKN
FINVWEIQRKDQLQQKVVCPGVVTCLTASPDGLFLAAAVSEAVYLWEVSTGKLLSVLSRH
YQDVTCLKFTDDSSHFVSGGKDNLALVWSLSSVIQLDLSHTPEPRHVLSRHSLPITDLHC
GLMGAQARVATASLDQTVKVWELSSGELLLSVLFDVEIMSVTFDPCEYFLFCGGSDGNIF
QVSLCSQSLSRDKSFQSDNDGNQVFKGHRNLVTCLSVSMDGTLLLSGSHDESVRLWDIQS
KQSIRCLTHKGPVTNAIIMAAPANMFLPDSRPALPLPRFSRHLHTSEGDGGESGEVCVRL
GLYAQEEEETYLQKSDRLNSLMNAVTDKSVFGDGENTKVRVAELEEEVQTLKKVNKDLYD
FSSQLLTKPT
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccctctggaggtgattgtgagcagtgactccggctcccagctgtggaacagc
accgtgttcgacctgcacagcggctccagcctgctgtcataccggggagggaacagctcc
gcccggacactgaccgtgctcggcgggcagtatctattgtccgctcagctgggcaagaac
ttcatcaacgtgtgggagatccagaggaaggaccagctgcagcagaaggtcgtgtgtcca
ggtgtggtcacctgtctgaccgcatcacctgacggactcttcctcgctgctgctgtctct
gaggctgtttacctgtgggaggtgtccacaggtaagctgttgtctgttctcagtcgtcac
tatcaggatgtcacctgtctgaagttcacagatgacagcagccattttgtttctggagga
aaagataacttggctctggtgtggagcctgtccagtgtgatccagctggatttaagccac
actcctgagccgcgtcatgttctgtcccgtcactctctgccaatcacagaccttcactgt
ggcctgatgggagctcaggccagagtcgccactgcctccttagaccaaactgtcaaggtg
tgggagttgtcctcaggtgagctgctcctctctgtcctgtttgatgttgagatcatgtct
gtgacatttgacccctgcgagtacttcctgttctgtggaggaagtgatggaaacattttc
caggtgtctctgtgcagccagtctctcagtcgggacaaatccttccagtccgacaacgat
gggaaccaggtcttcaaaggacacaggaacctggtgacgtgtctctctgtgtccatggac
gggactctgctcctctctgggtcacatgatgagtccgttcgactctgggacatccaaagc
aaacagagcatccgctgcctcacccataaaggtccagtaacgaacgccatcatcatggca
gctcctgccaacatgttcctgcctgacagtcggcctgccctccctctgccacgcttcagc
cgacacctgcacacctctgaaggcgatggcggcgaatcaggagaggtgtgtgttcgcctt
ggcctctacgcacaggaggaagaggaaacgtacctgcagaagtctgataggctgaactct
ttgatgaatgctgtgactgacaagtctgtgttcggtgacggcgagaacacgaaggttcga
gtcgccgagctcgaagaggaagttcagactctgaagaaagtcaacaaagatctgtatgac
ttctcaagccagctgctcaccaagcctacataa
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