Larimichthys crocea (large yellow croaker): 104936935
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Entry
104936935 CDS
T04659
Name
(RefSeq) occludin-like
KO
K06088
occludin
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03272
Virion - Hepatitis viruses
lco04514
Cell adhesion molecules
lco04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
104936935
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
104936935
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
104936935
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lco01009
]
104936935
Protein phosphatases and associated proteins [BR:
lco01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104936935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Occludin_ELL
MARVEL
Swi5
CCDC22_CC
SUR7
Sec8_N
CENP-K
APG6_N
Tropomyosin
DUF2381
WLS-like_TM
NagJ_C
Motif
Other DBs
NCBI-GeneID:
104936935
NCBI-ProteinID:
XP_010751332
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All DBs
Position
IX:426913..435226
Genome browser
AA seq
498 aa
AA seq
DB search
MSSRPNGSPPPYESDGYNGPPQPAYSYYPDDEFQHFYRWTSPPGILKIMSIMVIVMSVAI
FACVASTLAWDSQGAMGGFGYGGGAYGGGAYGGTYGGNYGSFGGGGYGAGNNYGYGGLGG
NYNDPRKGKGFIIAMAAITFIACLAIFIIIVSHQSLSESRKFYLAVIIICAILALLMMIA
AIVYLVAVNPMAQSSGSVYGSQIAGLCAQYQQPQPSGVFVNQYLYHYCVVEPQEAIAVVF
GFLVAIALIIMLVFALKTRQKIQNYGKSNILWKRVKVIDEMEPPQDVEAWVNNVSVAPEA
LPMSDYPEKLRGSRSHLDDESTNYDKPPYNYTPQPAEEEVPLQNGVPYSNSSEVASSAGR
PKKRRAGRPRRADGQDNDTDYYSSGDELDDDDFNSEFPPIADEQQRSDYKREFDRDHQEY
KDLQAELDSLNKKLSDVDRELDDLQEGSPQYLDALDEYNRIKNMKKTPDYQVKKRRCKYL
KSKLNHIKKMVSDYDRRN
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgaggcccaacgggagtccacctccgtacgagtcggacggatataacggccct
ccacagccggcctattcctactacccggacgacgagttccagcacttctaccgctggacg
tctccgccgggcatcctcaagatcatgtccatcatggtcatcgtgatgtccgtcgccata
tttgcttgcgttgcctccacgctggcttgggacagtcagggcgccatgggtggcttcggg
tacggcggtggcgcgtacggaggaggcgcatacggaggaacttatggagggaactacggc
agctttggcggtggcggttatggagccggaaacaactacggatacggtggactcggaggg
aactacaacgatccccgaaagggcaaagggtttatcatcgccatggcggccatcaccttc
attgcgtgcctggccatcttcatcatcatcgtgtctcatcagagcctatcagagagcagg
aagttctacctggcggtcatcatcatctgcgcaatcctagcgctgctaatgatgattgcc
gccatagtgtacttggtcgcggtgaacccgatggctcagtcctccggatcggtctacggc
agccagatcgccggtctgtgcgctcagtaccaacaaccgcaaccttcaggagtgttcgtc
aaccagtacctttaccactactgtgtcgtggagccgcaggaggccatcgccgtggtgttt
ggcttcctggtcgccatcgcgctcatcatcatgctcgtcttcgctctgaagactcgccag
aagatccagaactacggcaagagcaacattttgtggaagagggtgaaggtcatcgacgag
atggagccgccgcaggacgtcgaggcgtgggtgaacaatgtgtcggtcgctcccgaagct
ctcccgatgtcggactacccggagaagctgagaggctccaggagtcacctggacgatgaa
agcaccaactatgacaaaccaccctacaactacacccctcagcctgcagaagaggaggtg
cctttgcaaaacggcgtcccgtacagcaacagctcggaggtggccagctcggccgggagg
cccaaaaagagacgagcgggtcggccacgacgcgccgacggacaggacaacgacaccgac
tactactcctcaggagacgagctggacgacgacgacttcaacagcgagtttcctcccatt
gcggacgagcagcagcgcagcgactacaagcgtgaattcgaccgtgaccaccaggagtac
aaagacctgcaggcggagctggactccctcaacaagaagctgtccgacgtggaccgagag
ctggacgacctgcaggagggaagcccgcagtacctggacgctctggacgagtacaacagg
ataaagaacatgaaaaagactccagactaccaggtgaagaagcggaggtgtaaatacctg
aagtccaaactgaaccacatcaagaagatggtcagcgattacgaccgcaggaactga
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