Larimichthys crocea (large yellow croaker): 104936948
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Entry
104936948 CDS
T04659
Symbol
sart1
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
KO
K11984
U4/U6.U5 tri-snRNP-associated protein 1
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104936948 (sart1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lco03041
]
104936948 (sart1)
04121 Ubiquitin system [BR:
lco04121
]
104936948 (sart1)
Spliceosome [BR:
lco03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
104936948 (sart1)
Ubiquitin system [BR:
lco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104936948 (sart1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SART-1
HIND
HA
Motif
Other DBs
NCBI-GeneID:
104936948
NCBI-ProteinID:
XP_010751353
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All DBs
Position
X:27300879..27303431
Genome browser
AA seq
781 aa
AA seq
DB search
MGSSKKHKEKSRDKDTEERRREHKKHRHKDRERERDASDRDSTRDKEKRKRSRSRERSGR
ESRGKAERSSGEPRVKKEKVDVGYEESSADVGPQSASGDASLSIEETNKLRAKLGLKPLE
MNENKKELGTKEEPLVAETINPVLIHQQKEMREKLAAMKEKRIQNQKLGKVKTLAEEDWL
DDTKAWVERSRTLAKEKEMAEKRAKLLEEMDEEFGVSSLVEEEFAQTKKEAYTSQDLKGL
KVQHKVDSFNEGQTVILTLEDKGVLEEEEDVLVNVGLVDKEKAEKNVELKKKKPDYKPYE
EEESVDDMITFKSHSVLSKYDEEIEGEKKKSFRLNTGGFADGERERELQAMRETLRNQAQ
SLEMPALTIASEYYTPQEMVGFKKTKRRVKKIRKKEKQTAADILPDDTRSSDFGSRTRGR
GRHQAEEEGEGVKEEEEEEQQQESRLVHNIPQMSDDIRMAEMDISDEEDFTPPEPAVLEE
DEAEQELQKQLEKQRKLKQKQLLKDSGEKVAEQLKVLDKGNNDNDPERRNNIVFNATSEF
CRTLGDIPTYGQSGNREDQEDIMDFEREEEKDDAGDSDSEMDENVGWSTVNLDEEQKQPD
FSTASATILDEEPIVNSGLAAALLLCKNKGLLDTQMQKVARVRAPKGALPNDNYCIEDKM
GFDDKYSRREEYRGFTQDFKEKESYKPDVKIEYVDESGRKLTPKEAFRQLSHRFHGKGSG
KMKTERRMKKLEEEALLKKMSSSDTPLGTVALLQEKQKSQKTPYIVLSGSGKSMNANTIT
K
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggggtcgtctaagaaacacaaggagaagagccgcgacaaggacaccgaggagcgccgc
cgtgagcacaagaaacatcgccacaaggaccgggagcgagagagagacgcctcggaccgg
gattcgacccgggacaaagagaaacgaaaacgctccaggtccagagaaaggagcggacga
gagagccggggcaaagctgagcggagcagcggggagccacgagtgaagaaggagaaagtt
gatgttggatatgaagaaagcagtgcagacgtgggccctcagtctgcgagcggagacgca
tccctcagcattgaggagacaaacaaactccgagccaagctgggtttgaagccgctggag
atgaatgagaacaagaaggagctcggcactaaagaggaaccattggtggctgagaccatc
aaccctgttctcatccaccagcaaaaagagatgagagagaagctcgcagccatgaaagaa
aagcgcatccagaatcagaaactgggaaaagtcaagaccctcgcagaggaagactggctg
gatgacacaaaagcttgggtcgaaaggagcagaacgctggcaaaggaaaaagaaatggca
gagaaaagagccaaacttctggaagagatggacgaggagtttggtgtcagcagtctggtg
gaggaggagtttgcacaaactaaaaaggaagcctacacatcccaagatctgaagggactg
aaagtgcagcacaaggttgattcattcaacgagggccagactgttatcctgaccctggaa
gataaaggtgtgcttgaagaagaggaagatgtgcttgtaaatgtgggtctggtggacaag
gaaaaggcagaaaagaacgtggagttaaaaaagaaaaagccagattacaagccctatgaa
gaagaggagagtgtggatgacatgattacattcaagtctcattccgttctgtcaaagtac
gatgaggaaattgagggcgaaaagaagaagagtttccggttgaatacaggaggcttcgct
gacggagagagagaacgggagcttcaggccatgagagagactttacgtaatcaggcccag
tccttggaaatgcccgctctcaccattgcctctgagtattacacacctcaggaaatggtt
ggcttcaaaaagacaaaacgccgcgtgaagaagatcaggaagaaggagaagcagacagct
gcagatattctgcctgatgacacccgcagctctgattttggatccaggacacgcggccga
ggccgccaccaggccgaggaagaaggtgagggagtaaaggaggaggaggaagaggagcag
cagcaggagagtagattggtgcataatatcccccaaatgtctgacgatatcaggatggca
gaaatggacataagtgacgaggaagactttacaccccccgagccagctgtacttgaggag
gatgaggcggagcaggagctgcagaagcagctggagaagcagaggaagctgaagcaaaag
cagcttctcaaagactctggagagaaggtggcagagcagcttaaagtgctcgataaaggc
aacaatgacaatgatcctgagaggaggaacaacattgttttcaacgccacctcagagttt
tgcagaactcttggtgatattccaacttatggacagtcaggcaacagagaggaccaagaa
gacatcatggactttgaaagagaagaagaaaaagatgacgccggagattcagactcagaa
atggatgagaatgtcggatggagcacagttaacctggatgaagagcagaaacaaccagat
ttctccacagcctctgctaccattttggatgaagagcccattgtcaactctggcctcgct
gctgctttgttgttgtgcaaaaacaaaggtctgttggacactcaaatgcagaaggtagct
cgtgttagagcaccaaagggcgccttgccaaatgacaactactgcatcgaggacaagatg
ggctttgatgacaagtacagtcgcagagaagaatacagaggttttactcaagacttcaag
gagaaggagagctataagcccgacgtcaagatcgagtatgtggatgaatctgggcggaaa
ctcactccaaaagaagccttcaggcagctctcacatcgattccatgggaaaggctctgga
aagatgaaaacagagaggcggatgaaaaagctggaggaagaggcactgctgaagaagatg
agcagcagtgatactcctctgggcacggtggctttgctccaagagaaacagaaatcacag
aaaacgccctatattgtgcttagtgggagtgggaaaagtatgaatgcaaacaccatcacc
aaataa
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