Larimichthys crocea (large yellow croaker): 104936991
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Entry
104936991 CDS
T04659
Symbol
snx13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lco04990
]
104936991 (snx13)
Domain-containing proteins not elsewhere classified [BR:
lco04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
104936991 (snx13)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
Motif
Other DBs
NCBI-GeneID:
104936991
NCBI-ProteinID:
XP_010751406
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All DBs
Position
XIII:complement(48172205..48193235)
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AA seq
966 aa
AA seq
DB search
MSNVPQRRIPTSQQTQASLSIWGWGGLGVVLFLVTFGPFAIFYLAFYIFCFIGGGFAVTL
LYGKINSEKHLEKCEQSYLPPTQIGILKTLDEMRLEMKPIKIDRRLTGSSFIDEPLQQVI
QFALRDYIQYWYYTLSEDESFLLEIRQTLQNALVQFSTRSKEVDWQPYFTTRLVDDFATH
LRVFRKAQDRLADREDKQRDITEELVDSFFEAEVEMERKICRDVVCTSYKDEEGFLRDLC
ELLLYLLLPPGDFHNKNMRYFLREVLARGVLLPLINQLSDPDYINQFVIWMIRDSSCNYE
AFMNILKLTDKPAELEAVKDKVLEELQYLRSLDTAGDDINVIKNQINSLLFVKKVCETRI
QRLQSGKEVDALKLAANFGKLCVIPLDHILIHNIALQFFMDFMQAAGAQAELFFWLTVEG
YRVTAQQQLEAMQGWQKDGKKQPSATKGLLKAAALGVYEQYLSDKASPRVQVDEASVIKL
GEKLQKDDPTPEIFDEIQRNVYDMMLRDERYYPSFKQSPLYVRMLAELDMLKEPSYRGSD
DGEGESFNGSPTGSINLSLDDLSNACHDESMHLHAFISDTGVCNDHGKTYALYAITVVRR
NQDGTEDCWKTYRRYSDFHDFHMRITETFENLASILKLPGKKTFNNMDRDFLEKRKKDLN
AYLQLLLNPEMVKACPTLIPYVYDFLENKAYSKGKGEFARKIDTFVNPLRSSMRNVSNAV
KALPDSLAEGMTKVSDNMGRMSERLGQDIKQSILKVPPLLPKSDIDPEHCRVSAQLDDNV
DDNIPLRVMLLLMDEVFDLKEKNQWLRRNIKNLLQQLIRATYGDTINRKIVDHVDYLTSP
EQVADYVKKFRDSYWPNGILAETPPRRDKSIRMRTRVAAKTSLLGIMPDELKHIIGADTT
RKGILRVFDMFQHQPMNRRLVYVFLEGFLETMFPQYKFPELFVKLHSRSPRVHRYSQKLK
SSSLKR
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacgtccctcaacgacggattcctacatcacaacaaacacaggccagtctgtcc
atctggggatgggggggtcttggagttgtgctgttcctcgtcacctttggaccctttgcc
atattctacctggccttttatatcttctgcttcattggagggggcttcgcagtcactctg
ctctatggaaagatcaactcggagaaacacctggaaaagtgcgagcagtcgtacttgcca
cccacacaaattggtatactgaagacattggatgagatgaggctggagatgaagcccata
aaaattgacaggagactgaccggctccagtttcatagatgaaccactacaacaggtaatc
cagtttgctctaagagactacatccagtactggtactacactctgagcgaggatgagtct
ttcttattggagatcagacagacgctgcagaatgccctcgtccagttctctacaaggtcc
aaagaggtggactggcagccttacttcaccactcgcctagtggacgactttgccacccat
ttacgtgtctttagaaaagcccaggatcgcctcgctgacagggaggacaaacaaagggac
ataaccgaagagctggtggattccttctttgaggccgaggtggagatggagaggaagatt
tgtcgagacgtggtgtgcacttcatacaaggatgaagaaggttttcttcgggacttgtgt
gagttgcttttgtatctgttactacctcctggagatttccacaacaagaacatgagatac
ttcctaagggaggtgctcgcacgtggtgtgctacttcccctgatcaaccagctgagcgac
ccagactacatcaaccagtttgtcatctggatgatacgggactccagctgcaactatgaa
gcctttatgaacatactaaagctgacggacaaacctgctgaactggaggccgtcaaggac
aaggtgctggaggagctacagtacctccgctccctggacaccgctggagatgacatcaat
gtgattaagaaccagattaacagtcttctgtttgtgaagaaggtgtgtgaaaccaggatc
cagagactacagtctggcaaggaggtggatgccttgaagctggcagccaactttggcaag
ctgtgtgttatcccactggatcacatcctcatccacaacattgctctgcagttcttcatg
gactttatgcaggcagcgggggcccaggcagagctgttcttctggctcactgtggagggt
tacagggtgactgctcagcagcagctggaggccatgcaaggctggcagaaagatggcaag
aagcagcccagcgccaccaaggggctgctgaaggccgctgcactgggtgtctacgaacaa
tacctctctgacaaggcgtcccccagggtgcaggtggacgaggcgtcagtaataaaacta
ggggagaagctacagaaagacgaccctacaccagagatatttgatgaaatccagagaaat
gtgtatgacatgatgctacgtgatgagcgctactacccctccttcaagcagagtcctctc
tacgtccgcatgcttgcagagctggacatgttgaaagagccgagctaccggggatccgac
gatggcgaaggagaatccttcaatggctctcccacaggaagcataaacttatctttggac
gacttgtccaacgcctgccacgatgaatctatgcacctacatgccttcatctccgacaca
ggggtttgtaatgaccacggtaagacctacgcgctgtacgccatcactgttgtcagacgc
aaccaagacggtactgaggactgctggaagacctatcgccgctactctgacttccacgac
ttccatatgaggatcactgaaacgtttgagaacctggcatcgatcctcaagttgccgggg
aaaaagaccttcaacaacatggacagagacttcttggagaagagaaaaaaagacctcaat
gcttacctacagttgctgctgaacccagagatggtgaaggcctgtccaactctgattcct
tatgtttatgacttcctagagaacaaagcctacagcaagggcaagggagagtttgcacgc
aagatagacacatttgtaaatcctctgaggagctccatgagaaacgtgtccaacgcggtg
aaagccctgccagacagtctggctgagggcatgaccaaggtctctgataacatgggccgc
atgtcagaaagactgggtcaggacattaaacagtccatactcaaggtgcctccactcctc
cccaagtctgacatcgaccctgaacactgtcgagtctctgctcagcttgatgacaacgtg
gatgataacattcctctgagggtaatgctgctgctgatggacgaggtgtttgacctgaag
gagaaaaaccagtggctgcgcaggaacattaagaacctgctgcagcagctcatcagggcc
acatatggagacaccatcaacaggaaaattgtggatcatgtggactacttgacctcacca
gagcaagttgcagactacgtcaaaaagttcagagattcctactggcccaatggtattctg
gctgagacgccgccccgtcgggacaagagcattcgcatgaggacacgagtagctgccaag
accagcctgctgggcatcatgccagatgagctgaagcacatcatcggagcggacacaaca
agaaagggcatactccgtgtcttcgacatgtttcagcaccaacccatgaaccgtcggcta
gtctacgttttcctggagggcttcttggagacaatgtttccccagtacaaattccctgag
ctctttgtcaagctgcactcccgctcgccgcgcgtccacagatacagccagaaactcaaa
tcctcctcgctcaagaggtga
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