Larimichthys crocea (large yellow croaker): 104937001
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Entry
104937001 CDS
T04659
Symbol
rnf157
Name
(RefSeq) E3 ubiquitin ligase RNF157 isoform X1
KO
K25192
E3 ubiquitin-protein ligase RNF157 [EC:
2.3.2.27
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lco04121
]
104937001 (rnf157)
Enzymes [BR:
lco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104937001 (rnf157)
Ubiquitin system [BR:
lco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104937001 (rnf157)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-RING_11
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
104937001
NCBI-ProteinID:
XP_027133171
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All DBs
Position
I:complement(23689649..23714025)
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AA seq
699 aa
AA seq
DB search
MGALTSRQNIGVEEVDIPSNSVYRYPPKSGSYFASHFIMGGEKFDSTHPEGYLFGENTDL
NFLGTRPVAFPYAAPPPQEPVKTLRSLINIRKDTLRLVRCSEDLKLPGDEAAGKNRACYN
IEFTFDADTQVAITIYYQAMEEFHNGVPVYLPQDSSLQSETVHFKRGVCQQFCLPSHTVN
LSEWADEELLFDMDKEIFPMVVQAVVDEGEEHLGHSHILLATFEKHMDGSYCVKPLKQKQ
VVDGVSYLLQEIYGIENKYNSQESKVADDEISDNSAECVVCLSDVRDTLILPCRHLCLCN
ACADTLRYQANCCPICRLPFRALLQIRAMRKKLSPLSPTSFNPVITSQTSDSEEHSASEH
IPPGYEAVSLLEALNGPLNTSSVVPPPLHSGPSHVSGALPPYSSEPHPAPTRSLSPLDHS
NSSQGLKLKKSGSKSLSQNSSVLPEEEDEKSCSESDACRHKLAVDQQENGVTPDSENLTL
SSSGAIDQSSCTGTPLSSTITSPEDPVSSSLVQSVMSMASSHSQHSHISTDTMSSMSGSY
LAGAEGEPGGDDGGDVEGEENQDAAMESRGPSQQDGEFSQEPKEQNYSVAVEEQDSEGND
VTEEDCSSPSNGKGGRSRCPELANNNQGVALCDTPSLGLDNEQAPDSRFAGLMYLGGYRP
VLEPLPHHTSTSNINLEEQGAENRDGQSPKHPRRGPLIV
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgggagctttaacgagcagacaaaacataggcgtggaagaagtggacataccgtccaat
tcggtgtaccgttatccaccgaaatctggtagttactttgccagccatttcatcatgggg
ggagagaagtttgactccacccatccggagggttacctgtttggggaaaacacagacctt
aacttcctggggaccagacctgtggcgttcccgtacgcagcccctccacctcaggaacca
gtaaagacattacgaagccttataaacatccgtaaggacacgctgcggctcgtacggtgc
agcgaggacctgaagctgccaggagacgaggcggcgggcaagaacagggcctgctacaac
atagagtttaccttcgatgccgacacacaggtggccataactatctactaccaggccatg
gaggagtttcataatggagtgccagtttacctgccccaggacagctctctgcagtctgag
acggtgcattttaagaggggagtgtgccagcagttctgtctgccctcacacactgtcaac
ctcagcgagtgggctgacgaggagctgctgttcgatatggacaaagagattttccccatg
gtggtgcaggctgttgtagacgagggggaagaacatttaggccactctcacatactgctg
gcaacatttgaaaagcacatggacgggagctactgtgtgaagcctctgaagcagaaacaa
gtggtggatggagtgagctatctactgcaggagatctatgggatagagaacaaatacaac
agccaagaatcaaaggttgctgacgatgagatcagtgacaacagtgctgagtgtgtggtg
tgtttgtcggatgtacgcgacacactcatcctgccgtgcagacacctgtgtctctgcaac
gcctgcgcagacactctgcgctaccaggccaactgctgccccatctgcagactgccgttc
agagctctgctgcagatccgagccatgaggaagaagctcagccctctttcacctaccagc
tttaaccccgtcatcacttcacaaacctctgactcagaggaacactcggcgtctgagcac
atccctccaggctacgaagcagtgtctctccttgaagcgttgaatggccccctcaacacc
tcctcggtggtccctcctcctctccactctggtcccagccacgtctcgggagcgctgccc
ccgtacagcagtgaacctcacccggcaccgacccgttccctctcccctttagaccactcc
aactccagtcagggactcaaacttaaaaagagtggctcaaagtcactttcccagaattcc
tccgtgcttcccgaagaggaggatgagaagtcctgcagtgaatcggatgcctgtcgccac
aaactggctgtggaccagcaggagaatggagtgactccagacagcgagaacttgactctc
tcctcatctggagccatcgaccagtcatcctgcaccgggaccccgctatcctctaccatc
acgtcccctgaagacccagtgagcagcagcctggtccagtcagtgatgtccatggcctcg
tcccactcgcagcactcccacatcagcactgacaccatgtcctccatgtcagggtcctac
ctggccggggctgaaggcgaacccgggggggacgatgggggggacgtggagggcgaggag
aaccaggacgccgccatggagagccgaggaccatcgcagcaggacggggagttttcccag
gagccaaaggaacaaaattactcagtggctgtcgaggagcaggactcagagggaaatgat
gtaactgaagaagactgttcctccccgtctaatggaaaaggtgggcggagcaggtgtcca
gagttggccaataacaatcagggcgtcgccctctgtgacacgccctctttggggttggat
aatgagcaggctcccgacagccgattcgccggtctgatgtacctcgggggttacaggcct
gttttggagccccttccccaccacacctccaccagcaatatcaacctggaggagcagggg
gcagagaacagggacggccagagtcctaaacatccccgtcgcggaccactcattgtgtaa
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