Larimichthys crocea (large yellow croaker): 104937172
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Entry
104937172 CDS
T04659
Name
(RefSeq) ankyrin repeat and IBR domain-containing protein 1 isoform X1
KO
K11967
ankyrin repeat and IBR domain-containing protein 1 [EC:
2.3.2.31
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lco04121
]
104937172
Enzymes [BR:
lco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
104937172
Ubiquitin system [BR:
lco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
104937172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
Ariadne
IBR_1
IBR_2
Ank_2
Ank
UBA_ARI1
Ank_5
Ank_4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
104937172
NCBI-ProteinID:
XP_010751643
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All DBs
Position
XIII:complement(40215306..40235171)
Genome browser
AA seq
1324 aa
AA seq
DB search
MGNTATKFRKALVGGDEALAWQLYEGNPQFRDGLDPNASYGEQYQHNTALHYVCRHAMTR
LLRSFLFSKEGNPNKRNVHNETCLHVLCQGPQILLLSEGALSPRLARPQRDEQRRADCLQ
MILSWTGARLEGGQYEKANVNASDNHHSTCLHYAAAAGMKSCVELLIQSEADLFVEDEDK
LTPCDHAERHHHTELALSLESQMVFSSSSAQQSNPDAHGETNLLQYKEPYEGLKLQDLRK
LKDMLIVETADMLQAPLFTAEALLRAHDWDREKLLEAWMSDAEGCCQRSGVAMPTPPPSG
YNAWDTLPSPRTPRTPRSPLTLTLTSPTDSCLTPGEEGLSTCGICLCSISVFEDPVDMSC
GHEFCRACWEGFLNVKIQEGDAHNIFCPAYECYQLVPVHVIESVVSREMDQRYLQFDIKA
FVENNPAIRWCPAARCERAVRLTRPGPGDSDPQSFPLLPSPAVDCGKGHLFCWECLGEAH
EPCDCQMWRNWLQKVTEMKPEELAGVSEAYEDAANCLWLLTNSKPCANCKSPIQKNEGCN
HMQCAKCKYDFCWICLEEWKKHSSSTGGYYRCTRYEVIQQLEEQSKEMTVEAEKKHKSFQ
ELDRFMHYYTRFKNHEHSYKLEQKLLKTAKEKMEQLSRAFICREGTPPDTRFIEDGVCEL
LKTRRVLKCSYPYGFFLQQGSTQKEIFELMQTDLEMVVEDLAQKVNRPYLRTPCHKIISA
ARLVQQKRQEFLASVARGVAPNDSPEPPRRNYPGGSWDWEYLGFASPEMGSRHSVLGAGE
RERQSQDYADIQYRRRHRPRRRGDMLSLHNLRSSSNTPETSRRSDSTEAPERSESRRRAL
GSLDEDDPNILLAIQLSLQESRRERGLEGGMEGRLELERGLDRGQERRPGPVADLGDVAL
HSLNTDGPPGARGSTFPASLLDPPRPPNRTDSTSQPSVSSTLPLPPPPPSLSAELLELGD
SLMKLGNITTPYDLDAHTQELCSHHTYNHTTLTAPYIDPAYSDCSHRQDQNALSTPYVLD
HITVTDPRYDSKEQSYCHSSGYLAEAEHTASCALERTQNPAHPSSYNREHAATYDSTPKP
DSSYNPCPEHSSSYTQERPSAYALERPTKSDPQPPAQLCLPSPELEPDLLLSPVIPPGGP
FTPSDPQSLEPLDPTASAQLLDNIMAWFNNNINPQNNPQSLALIPSPPTTETDSSPDTHT
ETESESQASRDVTPAPIWQPLEGEPEADRGSGSPRLGAAGTECPKTSRPSTLDLENRKAC
EEGVDAGCVADLSLDEAHTHPCSHSQRGNSPAHTAPATETDLDLILQLEGDQSTEEWEEQ
VHLV
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atgggcaacacagccactaagtttcgcaaggccctggttggtggcgacgaggctctggcc
tggcagctgtacgagggcaaccctcagttcagggacggcctggacccgaatgcatcgtac
ggagaacagtaccagcacaacacggccctgcactatgtctgccgccacgccatgacacgt
ctgctcaggtccttcctgttcagtaaagaggggaaccccaacaagcgtaatgtgcacaac
gagacgtgcctccacgtgctgtgccaaggcccgcagatcctgctgctgtccgaaggagcg
ctgtcaccgcgactggcacgaccccagagagacgagcagcgccgcgcggactgcctgcag
atgatcctgagctggaccggcgccaggctggagggaggccagtacgagaaggccaatgtc
aacgccagcgacaatcaccacagcacctgtctgcactatgctgccgccgcgggcatgaag
agctgcgtggagctgctaatccagagcgaggcggacctttttgtggaggatgaggacaag
ttgacgccatgtgatcatgccgaacggcatcaccacaccgagctggccctcagcctggag
tcacagatggttttttcctcctcttcagctcagcagtcaaacccagacgcacatggcgaa
accaacctgctgcaatacaaggagccttatgagggactgaagcttcaggacctgcgcaag
ctgaaggacatgctcatcgtcgagacagcagacatgctgcaagcccccctcttcactgct
gaggccctgctccgagcacatgactgggacagagaaaagcttctggaagcctggatgtca
gacgctgagggttgctgccagcgctcaggcgtggccatgcccaccccgccacccagcgga
tacaacgcctgggacaccctaccttcacctcgcaccccgaggaccccacgctcacccctc
acactcaccctcacctccccgaccgacagctgcctcacgcccggagaggagggcctgtct
acgtgtggcatctgtctctgctccatctcggtgtttgaggatccagtggacatgtcctgt
ggacacgagttctgcagagcatgctgggaagggttccttaatgtaaagattcaggagggt
gacgcacacaatatcttctgcccggcctacgagtgctaccaattggtgccggtgcacgtg
atcgagagtgttgtttccagagagatggaccagcgatatttacagtttgacatcaaggca
tttgtagagaacaatccagccatccgctggtgtcctgcagcacgttgtgagcgggcggtg
cgtctcactcggccaggccccggagacagtgacccacagagtttccccctgctgccctcc
ccagctgtcgattgcggcaagggtcacctcttctgctgggaatgccttggtgaggcccac
gagccatgtgactgtcagatgtggaggaactggctccagaaagtcacagagatgaagcct
gaggagttggcaggtgtgagtgaggcctatgaggacgctgctaactgcctgtggctgttg
accaactccaaaccgtgtgccaactgcaagtcgcccattcagaagaatgagggctgcaac
catatgcagtgtgccaagtgtaagtacgatttctgttggatctgtctggaggaatggaag
aagcacagctcatcaacaggaggctactatcgctgcactcgctatgaggtcatccaacag
ctagaggagcaatccaaggagatgactgtagaggcagaaaagaagcacaaaagttttcag
gagctggatcgtttcatgcactactacactcgcttcaagaaccatgaacacagttataag
ttggagcagaaactgctgaagacggctaaagagaagatggagcagctgagcagagccttc
atttgtcgtgaaggcactcctccagacacgcgtttcatcgaggacggcgtttgcgagctg
ctgaagacgcgacgagtcctgaagtgctcttacccatacggcttcttcctgcagcaaggc
agcacccagaaagagatatttgagctcatgcagacggacctggagatggttgtggaggat
ctggcccagaaggtgaaccggccgtacctgaggacaccctgccacaagatcatcagcgcg
gcccgtcttgtgcagcagaagaggcaagaattcctcgcgtcggtggcccgtggcgtcgct
cccaacgattctcctgagcctccacgcaggaattaccctggaggatcgtgggactgggag
tacctcggctttgcctcccctgagatgggaagtcgtcactctgtactgggagcaggagag
cgggagagacagtcgcaggattatgctgacatccagtaccgtcgcagacacaggccacgg
cgcaggggtgacatgctgagtctgcacaatctgagaagcagcagcaacacaccggagacc
agcaggaggagtgacagtacagaagctccggagagaagcgagagccgcaggagagcgctt
ggctccctggacgaagatgacccaaacatcctgctggccatccagctgtcgcttcaggag
tcccgcagagagcgaggcctggagggaggcatggaggggagactggagctggagcgtgga
ctggacagaggacaggagaggaggccaggtcccgtcgcagacctgggtgacgtcgctttg
cactctctcaacacagacggccctcctggagccagaggttccaccttccccgcttctctc
ctggatcctcctcgaccccctaacaggacagactccacatcccagccttccgtgtctagc
acccttcccctccctcctccacctccctccctcagtgcggagctgctggagctgggagac
agccttatgaaactggggaacataaccactccttatgacctggacgcacacacacaggag
ctctgctcgcaccacacatacaaccacactacactcaccgccccatacatcgatcccgct
tacagcgactgcagccatagacaagaccagaatgcactgagcactccgtatgtgctcgat
catatcaccgtcacagatcctcgctatgacagcaaagagcagagttactgccactccagt
ggttatttggctgaggctgaacatactgcctcctgcgcacttgaacgcacccaaaacccg
gcccatcctagttcatataaccgggaacacgcagccacatacgacagcaccccgaaacca
gatagctcttacaacccctgcccagagcacagtagctcttacactcaggagcgtccctcc
gcctacgctcttgaacgcccaaccaaatcagacccccagccccccgcccaattgtgcctc
ccgtctccagagctcgagccggatctgctgctttcgccggtgatccctccagggggccct
tttacccccagcgaccctcagagtctggagcccctggaccccacagccagtgcccagctg
ctggacaacatcatggcctggtttaacaacaacatcaacccccagaacaacccccagagc
ctggccctcatcccctccccacccaccacagaaaccgactcctcccctgacacacacact
gagactgagtcagagagccaggcctccagggacgtgacccccgccccaatctggcagccc
ctggagggtgagccagaagcggacagggggtctgggagccctcgtctaggtgctgcgggc
acggagtgcccgaagacgtccaggcccagcactttggacctggagaacagaaaggcttgc
gaggagggtgtggacgctgggtgtgtggctgacctgtcgctggacgaagcgcacacacac
ccgtgctcacactcccaacgcggaaacagtcccgcacacactgccccggcgacagagaca
gacttagacctcatccttcagttagagggggaccaatcaactgaggagtgggaggaacaa
gtacacctagtgtga
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