Larimichthys crocea (large yellow croaker): 104937207
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Entry
104937207 CDS
T04659
Symbol
npas1
Name
(RefSeq) neuronal PAS domain-containing protein 1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lco03000
]
104937207 (npas1)
Transcription factors [BR:
lco03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
104937207 (npas1)
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_4
PAS_9
HLH
SAGA-Tad1
Motif
Other DBs
NCBI-GeneID:
104937207
NCBI-ProteinID:
XP_010751695
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Position
VII:complement(16856021..16891250)
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AA seq
809 aa
AA seq
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MATMPFVSEGKCVSVEWDFLQGLLAKPPTLPCLQNLRKEKSRNAARSRRGKENFEFFELA
KMLPLPGAITSQLDKASVIRLTISYLHMRTFASQGDPPWSPLMEGDSNCSKVRRSSHSLA
TDMFEQHLGAHLLQSLDGFVFVVSHEGRFLYISETVSIYLGLSQVELTGSSVFDYIHPAD
HVEMAERLGIRPHLRAEAGCLTAPESASSSASTSSLAGTPEPAPSSPHSPADDPPDRGFF
IRMKSTLTKRGLHVKSSGYKVIHVTGRIRCRPALVPGSTRSVRRPMGLVALAHTLPPSTL
NEVRMESQMFVFRVNMDLQVTYCENRISEYMDLTPAEVVGQTCYHFIHVEDLENLRQSHE
DLLRKGQVVTGYYRWLQRRGGYLWIQSTATVSINHKAPHERNVIWVNYVLSRTELPDTPL
DLLQLPENIRAERLRVSSPPTDSSPQARGLQPVKGSLGKSDPDAKGRDKFTATAIQSEDR
RKRLLRSEPEGAPPETRRRLEELRHAEESVSASSDLASESDGEEEEETEWDQGGDSDRLK
QEDGGRGGKQSRGGDTPTRGERSSRVHNGRAVIQQLKSVVTPSPLPGSPSIKTEHEALTT
GGRWGSHTQTSTSHTTQPQPSHAHTPSSSLNGDSPTTPIPDSSSSSEAPPKGLFTPPSPA
LSPAMSVSSPLPRDERSVSGVVSRSSGGAGNGPDFELLQRLAAGGAAGRVLFHPLALGPQ
GPQSLYAPSTIRYAPPELPPSHHHSAGHSDGLQLRTDHHKGPPPAFFPHLQRLAGLPPFS
GFSPSDSPFSSGLPFCMNGLRGAAGSEED
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccatgccatttgtcagcgaggggaagtgtgtgagtgtggagtgggatttccta
caggggctactggccaagcctcccaccctgccctgtctccagaacctgcggaaagagaag
tctcgcaatgcggctcgttcacggagggggaaggagaatttcgagttctttgagctggcc
aagatgctgcctctgcccggggccatcaccagccagctggacaaggcctcggttatccgg
ctgaccattagctacctgcacatgcgcacctttgccagccagggagacccaccctggagc
cctctgatggagggagacagcaactgcagcaaagtaagacgatcatctcattccctggct
actgacatgtttgagcagcacctaggggcacatcttctgcagtctctggatgggttcgtg
ttcgtggtcagtcatgagggacggttcctctacatttcagagacagtttctatctacctg
ggactctcacaggtggagctgaccggcagcagcgtgtttgactacatccacccagcggac
catgtcgaaatggccgagcggctgggaatcaggcctcacctgagggccgaagccggttgc
ctcacggcccctgagagtgcttccagctctgcatccacctcctccctagctggtacccct
gaacctgctccctctagtcctcattctcctgctgacgatcctcccgaccgtggcttcttc
atccgcatgaagtccacgctcaccaaaagaggcctgcacgtcaagtcctctggatacaag
gtaatccatgtgacaggacgaatccgttgccgccctgctctcgtgccgggctccacgcgc
tcagtgcgtcgaccgatgggtttggttgcactggcacacacgctcccaccctccacgctt
aatgaagtccgcatggagagccaaatgtttgtcttccgagtgaacatggacctacaggtc
acatattgtgaaaacaggatctcagagtatatggatctgaccccagcagaggtcgtggga
cagacctgttaccacttcatccacgtagaagacctggaaaacctccggcagagccatgag
gacctgctgaggaaaggccaagtggtgaccggctactaccgttggctccagaggagagga
ggctacctgtggatccagtctactgccactgtctccatcaaccacaaagcccctcacgaa
cgtaacgtcatatgggtcaactatgtcctgagtcgaacagagttacccgacactcccctg
gacctgctgcaactaccagagaacataagagcagagcgacttcgagttagctcgcccccc
actgacagctccccacaggcccgaggcttgcagccagtgaagggttcattggggaagagt
gaccctgacgctaaaggcagagacaaattcacagccaccgccatccaatcagaggacagg
aggaagcgtctactgaggtccgaacccgagggcgcacctcctgaaacccgccgcaggctg
gaagagcttcgtcacgcagaggagagtgtgtcagcctcctctgacctggcgagcgaaagc
gacggggaggaggaggaagagacagagtgggaccaggggggagacagtgacagactgaaa
caggaagacggcgggagaggaggtaaacagagtaggggtggagacaccccgactcgaggg
gagaggagcagcagggtgcataacggccgagctgtgatccagcagctgaagagcgtagta
accccgtctcccctgcccggcagccccagcatcaagactgaacatgaagccctaaccacc
ggagggcgctgggggtcacacacacaaacctccacctcacacaccacccagccccaaccc
tcacatgcacacacaccctccagcagcctcaacggcgacagccccaccaccccgatcccc
gactcttcctccagcagtgaggctcccccaaaagggttgttcactcccccgtccccggct
ttgtctcccgccatgtccgtgtcctccccgctcccccgtgatgagaggtccgtgtcgggg
gtagtcagtcggagcagtggtggtgcaggtaacggccctgactttgagctgctccagaga
ctggctgcaggcggtgcagcggggcgggtcctcttccacccccttgcccttggcccgcag
ggccctcagagcctctacgctcccagcactatccgctacgctccacctgagctgcccccc
tcccaccaccacagcgcaggacacagcgatggcctgcagctacgcacggaccaccacaag
ggacccccgccagccttcttcccccacctacagcggttggccggcttgccacccttcagt
ggtttctccccgtctgacagccctttctcttccggcctgcccttctgtatgaatggactg
aggggggctgcaggctctgaggaggactga
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