Larimichthys crocea (large yellow croaker): 104937218
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Entry
104937218 CDS
T04659
Name
(RefSeq) tubulin alpha chain isoform X1
KO
K07374
tubulin alpha
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04145
Phagosome
lco04210
Apoptosis
lco04517
IgSF CAM signaling
lco04530
Tight junction
lco04540
Gap junction
lco04814
Motor proteins
lco05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
104937218
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
104937218
09143 Cell growth and death
04210 Apoptosis
104937218
09144 Cellular community - eukaryotes
04530 Tight junction
104937218
04540 Gap junction
104937218
09142 Cell motility
04814 Motor proteins
104937218
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
104937218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lco03019
]
104937218
03036 Chromosome and associated proteins [BR:
lco03036
]
104937218
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lco04812
]
104937218
04147 Exosome [BR:
lco04147
]
104937218
Messenger RNA biogenesis [BR:
lco03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104937218
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
104937218
Cytoskeleton proteins [BR:
lco04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
104937218
Exosome [BR:
lco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104937218
Exosomal proteins of other body fluids (saliva and urine)
104937218
Exosomal proteins of colorectal cancer cells
104937218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
104937218
NCBI-ProteinID:
XP_027144674
LinkDB
All DBs
Position
XV:12026400..12037757
Genome browser
AA seq
451 aa
AA seq
DB search
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVSEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDSIEGEGEEEGEEY
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgtatctccatccacgttggtcaggccggtgtccagattggaaatgcctgc
tgggagctttactgcctggaacatgggatccagccggacggacagatgcccagtgacaag
accatcggaggaggagatgattccttcaacaccttcttcagtgagactggagctggaaag
cacgtccccagggctgtttttgtggacctggagcccactgtcatcgatgaggtgcgcact
gggacctaccgccagcttttccaccctgagcagctgatcactggtaaggaggatgctgcc
aacaactacgcccgtggacactacaccatcggcaaagagatcatcgacctggtgttggac
aggatccgcaaactggctgaccagtgcactggccttcagggcttcctggtcttccacagc
ttcggaggtggcaccggctctggtttcacctccctgctgatggagcgtctgtctgtcgac
tacggcaagaagtccaagctggagttctccatctacccagctccccaggtgtccaccgct
gtggtggagccctacaactccatcctgaccacccacaccaccctggagcactctgactgt
gccttcatggtagataacgaggccatctacgatatctgccgtaggaacctcgatatcgag
cgtccttcttacaccaacctgaacaggttgatcagtcagatcgtgtcctccatcactgct
tcccttcgtttcgatggtgccctcaatgttgatctgacagagttccagaccaacttggtg
ccatatccccgtatccacttccctctggccacctatgcccctgtcatctccgctgagaaa
gcttaccatgagcagctctcagtgtctgagatcacaaacgcctgcttcgagccagccaat
cagatggtgaaatgcgaccctcgccacggtaaatacatggcttgctgcctcttgtatcgt
ggtgatgtggtgcccaaagatgtcaatgctgccatcgccaccatcaaaaccaaacgcact
atccagtttgtggactggtgtcccactggtttcaaggttggcatcaactaccagccaccc
actgtggttcctggtggagacctggccaaggtccagagggccgtgtgcatgctgagcaac
accactgctattgcagaggcctgggctcggctcgaccacaagtttgacctgatgtacgct
aagcgtgcctttgttcactggtatgtaggtgagggtatggaggagggagagttctctgag
gccagagaggacatggcagctctggagaaggattacgaggaggttggtgtcgactccatt
gagggtgagggagaggaggaaggagaggaatattaa
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