Larimichthys crocea (large yellow croaker): 104937258
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Entry
104937258 CDS
T04659
Symbol
usp30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
104937258 (usp30)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lco01002
]
104937258 (usp30)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104937258 (usp30)
04121 Ubiquitin system [BR:
lco04121
]
104937258 (usp30)
Enzymes [BR:
lco01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104937258 (usp30)
Peptidases and inhibitors [BR:
lco01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104937258 (usp30)
Membrane trafficking [BR:
lco04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
104937258 (usp30)
Ubiquitin system [BR:
lco04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104937258 (usp30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF5700
Motif
Other DBs
NCBI-GeneID:
104937258
NCBI-ProteinID:
XP_010751759
UniProt:
A0A6G0IL37
LinkDB
All DBs
Position
III:complement(28441015..28447246)
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AA seq
505 aa
AA seq
DB search
MLWYRPESSDKLIGEFLGTGRVVRNKMIKNWGLIGGIAAALAAGVYVLWGPITERKKKKR
GMVPGLLNLGNTCFLNSLLQGLAACPSFIGWLEKFSASPMVQSCKDNQLSRTLLQLLKAL
SSDEPGEEDVLDAGSLLDVLRLYRWHISSFEEQDAHELFHVLTSSLEEERDHQPKVTHLF
DMQSLESLPDQDEKTMTCRSRAPLHPIPSPWKFQHPFHGRLTSNMSCKRCEQQSPVRYDS
FESLSLSIPLPQWGRPMSLDQCLQHFISSETIKEVECENCTKLQQVTTVNGPVLESQRTT
FVKQLKLGKLPQCLCIHLQRLTWSNEGTPIKRQEHVQFTEYLSMDRYKHNASTLRGQRVK
CAPAPIRTENSDDSTEKPTANGTEAEHRNNNNKPFSNGTCSSVFLHSPGVNPQLGLTYDF
SSTEYLFQLTAVLVHHGDMHSGHFVTYRRSPSSTRSASLFSSQWLWVSDDSVRKASLHEV
LSSNAYMLFYERVRRPNFSLRSSEE
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgttgtggtaccgtccagaaagctcggataagctcatcggggagttccttggcaccgga
cgcgttgtcagaaacaaaatgatcaaaaactggggtcttattggcgggatagctgctgca
cttgcagccggagtttacgttttgtggggaccaatcacagagagaaagaagaagaagaga
ggtatggttcccggtctgttgaacttaggcaacacgtgcttcctgaactctttgcttcag
ggtttggcagcttgtccgtccttcattgggtggctggagaagttttcagcttcgcccatg
gtccagtcatgtaaagacaaccagctgtccaggacactgcttcagcttctcaaagctctg
tccagtgatgagcccggggaggaagacgtactcgatgccggatcccttctggatgttctc
agactgtaccggtggcatatcagttcatttgaagagcaggatgcacatgaactttttcat
gtcctcacatcttctctggaggaggagcgggaccatcaacccaaagtgactcatttgttt
gacatgcagtctctcgagagcctgcctgatcaagatgagaaaactatgacctgtaggagt
cgagcccctcttcatcctataccaagtccttggaagtttcagcatccgttccacggtcgt
ctaacaagcaacatgtcctgcaagcgctgcgaacaacaaagtccagtgcggtatgactca
tttgagagcctctccctgtccattcctttacctcagtggggtcgacctatgtctctagat
cagtgtcttcagcatttcatctcttcagaaaccatcaaagaagtggagtgtgaaaactgc
accaagcttcaacaggtgaccacagtgaacggaccagttctggaaagtcagaggacaaca
tttgttaaacagttaaaactgggaaagctccctcagtgcctctgcatccatttacaaaga
ctgacgtggtccaatgaaggaacccccatcaaaagacaagagcacgtgcagttcacagag
tatctatcgatggaccgatacaaacacaatgcttccacactgagaggtcagcgggtcaaa
tgtgcaccggctccaatcaggacagaaaattcagatgattccacagaaaagccgacagct
aacggcaccgaagcagagcatcgcaacaacaacaacaaacctttttccaatgggacctgt
tcgtctgtgtttcttcactctcctggtgtgaacccacagctcggcctcacgtatgacttc
agttctacagagtaccttttccaactcacggctgtgctggttcatcacggtgacatgcac
tcaggacatttcgtcacgtaccgccgcagcccttcctcaacccgcagcgcttcactcttc
agctctcagtggctttgggtgtcagacgactcggtacgaaaagccagcctgcacgaggtg
ctgtcttccaacgcttacatgcttttctacgagagagtcagaagaccgaacttcagtcta
cgctcgtcagaggagtaa
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