Larimichthys crocea (large yellow croaker): 104937306
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Entry
104937306 CDS
T04659
Symbol
trpc1
Name
(RefSeq) short transient receptor potential channel 1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lco04040
]
104937306 (trpc1)
Ion channels [BR:
lco04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
104937306 (trpc1)
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
MTR4-like_stalk
LHD_TRPY1
TALPID3
Motif
Other DBs
NCBI-GeneID:
104937306
NCBI-ProteinID:
XP_019130272
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Position
XXIII:complement(9025431..9039284)
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AA seq
796 aa
AA seq
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MHISVWPCSVSVVMAALYQGTDASSPDKFLALKDVREVKEETTLDEKLFLLACEKGDYYM
VKKLLEENRHGELNINCVDVLGRDAVTITIENENLDILQLLLEHGCQATDALLVAIDSEV
VGAVDILLNHRPRRSSKPSIAKLMQRIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQD
ISLPRPHAVGCECTLCNAKNKKDSLRHSRFRLDIYRCLASPSLIMLTEEDPILRAFELST
DLKELSLVEVEFRNDYEELAKQCKMFAKDLLAQARNSRELEVILNHTSSEDHVDKRGLLE
ERMNLSRLKLAIKYNQKEFVAQSNCQQFLNTVWFGETASYRRKHTCLKMATVLSVAMLWP
LLSVCYLLVPRSRMGQIIHTPFVKFIIHSASYFTFLLLLNLYSLVYNEDKKNTMGPALEM
VDFLLILWIIGMVWSDVKRLWYEGLEDFLDESRNQLSFVMNSLYLATFALKIVAHSKFKD
VGDIERKNWDAFHPILVAEGLFAFANILSYLRLFFMYTTSSILGPLQISMGQMLQEFGKF
LGLFLLVLFSFTIGLTQLYGKDQKDPDKDPPKDCEGIFCQQQSNDAFHTFMGTCYALFWY
IFSLAHVALFVTRISYTEELRSFVGAMIIGTYNVVVVIVLTKLLVAMLHKSFRQIANHED
KEWKFARAKLWLSYFDDKCTMPPPFNILPSPKTVCYLVTSMSKWICSHTSKGRVKRQNSL
KEWKNLKQKRDENYQKIMCCLVHRYLTSTRQKMQSTDQATVENLNDLRQDLSKFRNEMRD
LLGFRTSKYAMFYPRS
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcagtgtttggccgtgctcggtctccgtcgtaatggcagctctgtatcagggc
acggacgcctcctctccggataaatttctggccttgaaagatgtgagagaggtgaaagag
gaaactaccctggatgagaagctcttcttgctggcatgcgagaaaggtgactattacatg
gtgaagaaactcctggaggagaaccgacacggcgagctcaacatcaactgcgtagacgtg
ctgggccgtgatgctgtcaccatcaccatcgagaacgagaatttagacatcctgcagctt
cttctagaacatggctgccaggcaacagatgccttgctggtggctatagactctgaggtg
gtgggagctgtggacatcctcctcaaccacaggccaaggcgatcttccaagccctccatt
gctaaactgatgcagaggattcaaaacccggagtattccacaaccatggatgttgctcca
gtcatactggcagcccacaggaacaactacgagatcctgactatgctgctgaaacaggac
atctcccttccccggccccatgccgtaggctgcgagtgcacgctgtgcaacgctaaaaac
aagaaggacagcttaagacactccaggttccgcctggacatctaccgctgcctggccagc
ccctctctgatcatgttgactgaagaagatcccatactcagggcctttgagctaagtaca
gacctcaaggagctcagcctggttgaggtggagttcaggaatgactatgaggagctggcg
aagcagtgtaagatgtttgccaaggacctgctggctcaggctcgaaactctcgagagcta
gaagtgattctcaatcacacatccagcgaggatcacgttgacaagcgaggcttactggag
gagcgcatgaacctcagtcgactcaagcttgccatcaagtacaaccaaaaagagtttgtg
gctcagtccaactgtcaacagttcctcaacaccgtctggtttggagagacggccagctac
cgtcgcaaacacacctgtctgaagatggccacagtgctgagcgtggcaatgctttggccg
ctgctctctgtctgctaccttctggtgccacgctcacgtatgggccagatcattcacacg
cctttcgtcaagttcatcatccacagcgcctcctacttcacgttcctgcttctgctcaac
ctgtactctctggtttacaatgaggacaagaaaaacaccatgggtcctgcgctggagatg
gtagatttcctgctcatcctctggatcatagggatggtgtggtcggatgtgaagcgtctg
tggtacgaaggactggaagactttctggatgagtctaggaaccagctgagcttcgtcatg
aattctctttacttagccacctttgccctcaagatagttgctcatagcaagttcaaggat
gtgggcgacatagagaggaagaactgggatgccttccatcccatcttggtggcagaaggc
ctgtttgcatttgccaacattttgagttacctgcgactcttcttcatgtacaccaccagc
tccatactggggccactacagatctccatgggtcagatgctgcaggagtttggaaagttt
ttgggcctcttcctgctggtgttattctccttcaccattggactcacccagctttatgga
aaggaccagaaagacccagacaaggatccacccaaggactgtgagggcatattctgccag
caacagagcaatgatgcattccacacgtttatgggaacctgctatgccctattctggtac
atcttctccctggcacatgttgcactcttcgtcacccgcatcagctacacagaggagctg
cgctcttttgtgggtgccatgatcataggcacctacaacgttgtggtggttattgtgctg
accaagctgctggtggccatgctccataaaagctttagacaaattgctaatcacgaggat
aaggagtggaagtttgctcgtgccaaactgtggctaagctactttgacgacaagtgtact
atgcctccaccgttcaatatcctcccctccccaaagactgtctgctacctggtgaccagc
atgagcaagtggatctgttcgcatacctcgaagggcagagtgaagcgacagaacagcctc
aaggagtggaagaacttgaagcagaagcgtgacgagaactaccagaagatcatgtgttgt
ctggttcaccgctacttgacctccacgcggcagaagatgcagagcacggaccaggcgacg
gtggaaaatctgaatgacctgcgccaagacctctccaagtttcgcaatgagatgagggac
ctgctcggcttccggacctccaaatatgccatgttctacccaaggagctaa
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