Larimichthys crocea (large yellow croaker): 104937323
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Entry
104937323 CDS
T04659
Name
(RefSeq) E3 ubiquitin-protein ligase HECW2 isoform X1
KO
K12168
E3 ubiquitin-protein ligase HECW2 [EC:
2.3.2.26
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lco04121
]
104937323
Enzymes [BR:
lco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
104937323
Ubiquitin system [BR:
lco04121
]
Ubiquitin ligases (E3)
HECT type E3
104937323
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
HECW_N
HECW1_helix
WW
C2
Motif
Other DBs
NCBI-GeneID:
104937323
NCBI-ProteinID:
XP_027147479
LinkDB
All DBs
Position
XIX:complement(12631379..12655809)
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AA seq
1572 aa
AA seq
DB search
MAMAATASTSAAPPSSSSSTNGSAREHLLAVRRRTPHSRPYTIGPDNLRSLSVQGARSST
SASSSAMSSGNQSEASGVGLQRANSDTDLVTSESRSSLTASTYQLTLGHSHLVISWDIKE
EVDATDWIGLYHIDETCVANVWDSKNRGVNGTQKGQIVWRLEPGPYFMEPETKVCFKYYH
GVSGALRATTPCITVKNPGVLVGSEGQVEDQSGTEHCRKLVSFTLSDIRAAGLKKGMFFN
PDPYLKMSIQPGKRSGLPKFTHHGQERRSSIIANTTNPVWHGEKYTFVALMTDVLEIEVK
DKFAKSRPIIKRFLGQLILPVQRLLEGPTAEDQPVSYSLCRRLPTDHVSGQLLFRVDITS
TGQEEASPDAVGTILGGAVNGDPGSPSDDEDLPHPSSSSRVTYGPSPTGSDEGSLIVNSA
CYYGDDSVWREPGQMGGEEDLLSVATGGHTHRQVSLNDYLDAIEAPRSPGDRPFMGPSPK
LRSSFPTDTRLNAMLHIDSDEDEETAGQHREQSQEARTQQSTDLSGRLATSESEQGDEGP
KAEAQGPAEAGTGAITEADSSAGNEPAGAEPEGAAVDQTQAGTSTTAETAAGTGEVAGAS
AEAAPVTGETSTAPSSSQASGAEAAAAVPTPAEAVVECTCQEQSSRVGANQELPCNSSLG
PLSPIQEVETRTEVAPKAEEEGAESSSSEANGPVAAAAPTSDNTADTDGARAGGGGDGQA
EEGEEEEEGGGVWRRRPSMQASGGVAQNQEPSGARESPNGAAGAERELGATAQVNGHQSS
VRSLPSIRHDISRYQRVDEPLPPSEYWEARIDSHGRIFYVDHVNRTTTWQRPTAPPALQT
LQRSDSIQQMEQLNRRYQSIRRTITSDSRPEEQLANELPPDETDMHPSIPELRRDNSVAQ
SSSRSRLTLLLQSPSAKFLTSPDFFTVLHSNPSAYRMFTTNTCLKHMISKVRRDAHHFER
YQHNRDLVAFLNMFANKQLELPRGWEMKHDHTGKPFFVDHNCRATTFIDPRLPLQSTRPP
SILAHRQHLTRQRSHSAGEVSPRRLVGEDPRHAGPPVLPRPSSTFTSANRGQCQDVVPVA
YNDKIVAFLRQPNIFEILQERQPDFNRNHSLREKVQLIRTDGGSGLARLSGDADLVMLLS
LFEDEVMSYVPPHALLHPSYCQSPRGSPVSSPQNSPGTQRANARAPAPYKRDFEAKLRNF
YRKLETKGYGQGPGKLKLIIRRDHLLEDAFNQIMCYSRKDLQRSKLYVSFVGEEGLDYSG
PSREFFFLVSRELFNPYYGLFEYSANDTYTVQISPMSAFVDNHHEWFRFSGRILGLALIH
QYLLDAFFTRPFYKGLLRIPCDLSDLEYLDEEFHQSLQWMKDNDIEDMLDLTFTVNEEVF
GQITERELKPGGANIPVSEKNKKEYIERMVKWRIERGVVQQTESLVRGFYEVVDARLVSV
FDARELELVIAGTAEIDLSDWRNNTEYRGGYHDNHIVIRWFWAAVERFNNEQRLRLLQFV
TGTSSIPYEGFASLRGSNGPRRFCVEKWGKVTSLPRAHTCFNRLDLPPYPSFSMLYEKML
TAVEETSTFGLE
NT seq
4719 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggctgccactgcctccacctctgccgcgcccccgtcgtcctcgtcgtcgacc
aacgggagcgcccgagagcacctgctggcggtgcgtcggcgcaccccgcactcccggccg
tacaccatcggccccgacaacctccgcagcctgtcggtgcagggagccagatcctccacc
tcggcatcctcctccgctatgtcgtcagggaaccaatcagaagcgtcaggggtggggctc
cagcgggccaatagcgacactgacctggtgacgtcagagagccgctcatcgctcacagcg
tccacataccagctgactctgggccacagccacctggtcatctcctgggacatcaaggag
gaagtggatgccaccgactggatcggcctgtaccacatcgatgagacgtgtgtggccaac
gtgtgggactcaaagaatcgaggcgtgaacggcacccagaagggacagatcgtgtggaga
ctggagccggggccctacttcatggagcctgagactaaggtctgctttaaatattatcat
ggcgtaagtggagcattgcgagcaacgacaccttgtatcactgtcaagaaccctggagta
ctggtgggaagcgaaggccaagtggaggaccaatcagggactgagcactgtcggaaacta
gtcagcttcaccctatcagacatccgggcagcaggcctgaagaagggcatgtttttcaac
cccgacccctacctcaaaatgtccatccagcccgggaagaggagtggactccccaagttc
acccaccacggccaggagagacgctcctccatcatagctaacaccaccaaccctgtgtgg
cacggggagaaatacacctttgtggctctgatgactgacgtgttggagatcgaggtgaag
gataagtttgccaagagccgaccaatcatcaagcgatttctgggtcagctgatcctccct
gtgcagagactcctggaggggccgacagcagaagatcagccagtcagctacagtctgtgt
cgtcgtctccctacggatcatgtgagcgggcagcttctgttcagagtggacatcacctcc
actggacaagaagaagcttccccagacgccgtgggaaccatcttgggtggcgcagtgaac
ggtgaccccggcagtccctccgacgacgaagacctccctcacccgtcctcgtcctcgcgc
gtcacatacggaccctctcccacgggctcagacgagggctcactgatagtcaacagtgct
tgttactatggcgacgacagcgtgtggcgggagcccgggcagatgggaggagaggaggat
ctgctttctgtggctacaggcggccacacccaccggcaggtgtcactcaacgactacctg
gatgccatcgaggcgccgcggagcccgggggaccggcccttcatgggtccttcgccgaaa
ctccgctccagctttccgacggacacacggctcaacgccatgctgcacatagactcagat
gaggacgaggagacagcgggacagcacagggagcaatcacaggaggcgaggacacagcag
agtacagacttatctgggagattggctacatcagagtctgaacagggggatgagggtcca
aaagcagaggcacaggggccggctgaagctggaacaggggccataacagaggcggattcc
tctgctggaaatgagcctgcaggggctgaacctgaaggtgcagctgtagaccaaacacaa
gcaggaacatcaaccaccgctgagactgcagctgggaccggagaggtcgctggagcatcg
gcggaggctgcaccagtcaccggagaaacctccacagctcccagctcctctcaggcatca
ggagctgaagcagccgcagcagtacccacgccggcggaggctgtggtggagtgtacctgt
caggagcagagcagcagagtgggtgcaaaccaggaattaccctgcaattcctcactcgga
ccactttcacctattcaggaggtggagacgaggacagaagtggctccaaaggctgaggag
gaaggggcggagtcatcgagcagcgaggcgaacgggccagtagcagcagctgctccgacc
agcgacaacacagctgacactgatggagcgagagccggcggcggcggggacggccaggcg
gaggagggggaggaggaggaggagggcgggggtgtgtggaggaggaggccgtccatgcag
gcctcaggaggcgtggcccaaaaccaggagccgagcggggccagggagagtccgaacggg
gcggcgggggctgagagagagctgggtgccacggctcaggtcaatggccaccagtcttct
gttcgctccctgccatctatccgccatgacatcagtcgctaccagagagtggacgagcca
ctaccacctagtgagtactgggaggctcgtatcgacagccacggtcggatcttttacgtg
gaccacgtgaacagaaccacaacatggcagcgtcccaccgctccgcccgccctgcagacc
ctgcagaggtccgactccatacagcagatggagcagctgaaccgcaggtatcagagtata
cgcaggacgataaccagtgacagcagaccagaggaacagctggccaatgagctgccgccg
gatgagactgatatgcacccctccatcccagagctgcgtagagacaacagtgtggctcag
tccagttccaggtctcgcctcaccctgctgctccagtcccccagcgctaagttcctcacc
agccccgacttcttcactgtgctgcattccaaccctagtgcctaccgtatgttcaccacc
aacacgtgtctgaagcatatgatcagtaaggttcgtcgggatgctcaccactttgagcgc
tatcagcacaacagggacctggtggccttccttaacatgttcgccaacaaacagctggag
ctgcccagaggctgggagatgaagcacgaccacaccggcaagcctttcttcgtggatcat
aactgccgtgccaccaccttcatcgacccccggctgcctctccaaagcactcggcccccg
agcatcctagctcaccgccaacacctgacccgccaacgcagccacagtgctggtgaggtc
agcccacgacgattggtgggtgaagaccctcgtcatgccggcccacccgtcctgccgcgg
ccttccagcaccttcacctctgccaacagggggcagtgccaagacgttgtgccagtggcc
tacaatgacaagatcgtggcgtttcttcgacaaccgaacatctttgagattttacaggag
agacagcccgacttcaaccggaaccactcactcagggagaaggtgcagctgatccgcaca
gacggaggttcaggattggccaggctgtcaggtgacgctgaccttgtcatgctgctaagt
ctatttgaagatgaagtaatgtcctatgtgcctcctcacgccttacttcaccccagctac
tgtcagtcacctcggggatcacccgtctcctccccacagaactcgcctggtactcagaga
gccaatgctagagcaccagcaccctacaagagagactttgaggccaaactgcgcaacttc
tacaggaaactggaaactaaaggctacggccaaggaccagggaagctaaagttgatcatc
cgtcgtgaccacctgctggaagatgccttcaaccagatcatgtgctactccaggaaagac
ctgcagcgcagcaagctctacgtcagctttgtaggggaggaggggttggactacagcggg
ccttccagagagttcttcttcttggtttccagagagctgttcaacccttactacggtctg
tttgagtattctgccaacgacacctacacggtccagatcagccccatgtcggccttcgta
gacaatcaccacgaatggttccggttcagtggtcgtattctgggtttggctctgatccac
cagtacctgctggatgccttcttcaccagacccttttataaaggcctgctgcgcattccc
tgtgacctgagtgacctggagtatctggacgaggagtttcaccagtcccttcagtggatg
aaggacaacgacatagaagacatgctggacctcaccttcaccgtcaacgaggaagtcttc
ggacagataacagaaagggagctgaagcccggcggagccaacatccccgtctccgagaag
aacaagaaggaatacattgagcggatggtgaagtggaggatagagagaggggtggtgcag
cagactgagagcctggtcagaggcttctacgaggtggtggatgccaggctggtgtcggtg
tttgacgccagagagctggagctggtgatcgccggcacagctgagatcgacttatcagac
tggaggaacaacacggagtacagaggaggttaccatgacaaccacatcgtgatccggtgg
ttctgggcagcagtggagaggttcaacaatgagcagaggctgcgtctcctgcagtttgtg
accgggacgtccagtattccttacgagggctttgcttctctgcgaggaagtaacggaccc
cgcaggttctgtgtggagaagtgggggaaggtcacctcactgcccagagctcatacctgt
tttaaccggctggacctgccaccgtacccgtccttctcgatgctgtatgagaagatgctg
accgccgtggaggagaccagcacctttggactggaatga
DBGET
integrated database retrieval system
