Larimichthys crocea (large yellow croaker): 104937326
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Entry
104937326 CDS
T04659
Symbol
u2surp
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
KO
K12842
U2-associated protein SR140
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104937326 (u2surp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lco03041
]
104937326 (u2surp)
Spliceosome [BR:
lco03041
]
Complex A
U2 snRNP components
U2 related factors
104937326 (u2surp)
Complex B
104937326 (u2surp)
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Paralog
GFIT
Motif
Pfam:
Surp
RRM_1
cwf21
CID
CTK3
SET_assoc
RRM_7
DUF2299
Motif
Other DBs
NCBI-GeneID:
104937326
NCBI-ProteinID:
XP_010751837
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All DBs
Position
XXIII:complement(9004179..9013108)
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AA seq
980 aa
AA seq
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MADRAPGGSQKASAKALLESKLKSFSIGKMAVAKRTLSKKEQDEIKKKEDERAAAEIYEE
FLAAFEGGGEGKVKAFVRGGIANATKEEAAADEKKGKLYKPKSRFETQTKSFLPLETPPQ
FLALDKRHSLKKTTEKEKKKSNLELFKEELKQIQEERDERHKMKGRVSRFEPLSGADGRR
SSDGSSRRNRPSSVLDDCAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRYGPLASV
KIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMNFEMKLGWGKGVPIPPHPI
YIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPLLPPPKNKEEFEKTLSQAIVKVVIPT
ERNLLSLIHRMIEFVVREGPMFEAMIMNREINNPMYRFLFENQSPAHVYYRWKLYSILQG
EAPGKWRTDDFRMFKNGSLWRPPPLNPYLHGPYDDGDEEEEEEEGSKKGCLKEEERDKLE
EMLRGLTPRRGDIAEAMLFCLSHAEAAEEIVECITESLSILKTPLPKKIARLYLVSDVLY
NSSAKVSNASYYRKYFEAKLCQIFSDLNATYKAIQGHLQSENFKQRVMSCFRAWEDWAVY
PDPFLIKLQNIFLGLVNLAAEKEPPVIIVEAEPAEDIDGAPIGEYVDGTPLEDVDGVPID
AGPIDGAPIDGAPLDDLDGVPIKPMEEDIDGIPLDQSKEATFKVAPSKWEAVDESELEAQ
AVTTSKWEMFEQPEEAKKDDDYSDDDDRSPRSEDQSYSNPIRDDSDHKAKMSEMNEEKRI
KLREIEVKVMKFQDELESGKRPKKPGQSIQEQIEHYRDKLLQKEKEKEKLEREKEREKKE
KEKAEARLKDLKKEKEKEDTPTRKERYLSPPVDRKRRHSGSPSPTRSSSRRGRSSSPRSE
RSERSERSDRSYSKDTSSRSSHKDSPRSSNKKSSKRSPSPRTPKRSRRSRSRTPKKSTKK
SRSKSRSPHRSHKKSKKSKH
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccgagcgcctggcggctctcagaaagctagcgctaaggcgctgctcgagagc
aaactgaagtctttcagcattggcaagatggcagtggcaaagaggaccctgagcaagaag
gagcaagatgaaatcaagaagaaagaggatgagcgagcggcagcagagatctatgaggag
tttcttgccgcttttgaaggaggaggagagggcaaagttaaggcctttgtccgcggcggt
attgcaaatgcaacaaaagaggaggcagctgccgatgaaaagaaaggaaagttgtacaaa
cccaagtcgcgcttcgaaacccaaacaaaaagcttcttgcctttggaaaccccacctcag
tttttagcattagacaagagacactctttgaagaaaaccactgagaaggaaaagaagaag
agcaacttggagctcttcaaagaagaacttaagcagatacaagaggaaagggatgaaaga
cacaagatgaaaggacgtgttagtcgcttcgaacctctctcgggcgcggatggaagacgt
tcatcggatggttcttcaagaagaaaccgtccgtccagtgttttggatgattgtgcgcca
ggttcccatgatgttggagacccatcgactactaacttgtatctcggaaacatcaatcca
cagatgaatgaggagatgctgtgtcaagagtttggccgctatggcccgctggccagtgtg
aagatcatgtggccgaggacagacgaggagagggctcgggagaggaactgtggctttgtg
gctttcatgaacaggagggatgctgagcgagcactcaagaatctaaatggaaagatgata
atgaactttgagatgaaattaggatggggcaaaggtgtgcccattccaccccaccccatc
tacatccctccttccatgatggagcacacactcccaccgcctccctctggcctacccttc
aacgcacagccccgggagaggctaaagaaccccaatgctcccctgcttcctccacctaaa
aacaaggaggagtttgagaagactctgtcgcaagccatagtcaaagtggttatcccaaca
gaaaggaatttgctctctctcatccaccgaatgatcgagtttgtggtgcgtgaaggccca
atgtttgaagccatgatcatgaacagagaaatcaacaatccaatgtacaggtttctattt
gagaatcagagcccagcacatgtgtactaccgttggaagctctactccatactacagggt
gaagcaccaggcaaatggcgaacagatgactttagaatgtttaagaatggctctttgtgg
cgtccgcctcctcttaatccatacctccatggtccttatgatgatggtgatgaagaggag
gaagaggaagagggcagcaagaaaggctgcttaaaagaagaagagcgtgacaaactcgag
gagatgctgcgtggtttgactcccaggaggggagacatagcagaagccatgttgttttgc
ctgagccacgccgaagcagctgaagagattgtggagtgtatcacagagtctctctctatc
ctcaagacccctcttcccaaaaagattgcacggttatatctcgtttctgatgtgctgtac
aactcgtctgccaaagtatccaatgcgtcttactacaggaaatattttgaggcaaagctc
tgccagattttctcagacctcaacgcgacatacaaagcgatacagggccaccttcagagt
gagaactttaagcaacgagtgatgtcatgtttccgggcatgggaagactgggcggtatat
ccagaccccttccttatcaagctgcagaacatcttcttaggtctagttaatctggctgca
gagaaggaacctcccgtcatcattgtggaggctgagccagcagaggatattgatggagct
ccaataggggagtatgtagatggaactccgctggaagacgtggatggcgtgccgattgac
gcaggacccattgatggcgctcctattgacggagccccactggatgacctagatggtgtt
cctatcaagcccatggaagaagacatagatggaatacctttggatcagtccaaggaagca
actttcaaggtagcaccttcgaaatgggaagcagtggacgagtcagagttagaagctcaa
gctgtgacgacctcaaaatgggaaatgtttgagcagccagaagaagccaaaaaggacgac
gattatagtgatgacgatgacaggagccctcgttcagaagatcaaagctactccaacccc
atcagagatgactccgatcacaaagctaagatgtctgaaatgaatgaggagaaacgcatc
aaactcagagaaatagaggttaaggtcatgaagtttcaggatgagctggagtctggcaaa
aggcccaagaagcctggccagagtattcaggaacagatagagcactacagagacaaacta
ctacaaaaggaaaaagaaaaggagaaacttgaacgggagaaagagagggagaagaaagag
aaggagaaagctgaggcacggctgaaagacttgaagaaagaaaaggagaaagaggacacg
ccaaccaggaaggagagatatttgtcccctccggttgataggaagcggcgtcacagtggg
tcgcccagccccacgcggagtagcagcagacgaggccggtcatcgtcgccccgttcagaa
cggtcagagagatcagaacgctccgaccgctcatactctaaagacacatcttcccgttct
tctcataaagattccccgcgatccagcaacaagaagtcctccaagagatctccgtcacct
cgcacacccaaacgatcaaggaggtcgcgctccaggacgcccaagaaatcaactaagaag
tcgcgctccaaatcaaggtcaccacaccggtctcacaaaaaatcaaagaagagcaaacac
tga
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