Larimichthys crocea (large yellow croaker): 104937358
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Entry
104937358 CDS
T04659
Name
(RefSeq) serine/arginine-rich splicing factor 4 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03040
Spliceosome
lco05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104937358
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
104937358
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lco03041
]
104937358
Spliceosome [BR:
lco03041
]
Common components
Common spliceosomal components
SR proteins
104937358
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
104937358
NCBI-ProteinID:
XP_019109804
LinkDB
All DBs
Position
XIII:complement(8175853..8181466)
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AA seq
389 aa
AA seq
DB search
MSRVYIGRLSYRAREKDVERFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVYDLNGKEL
CGERVIVEHTKGPRRDGGYGGRSTKAASKEDLKGGYGRWGRDRYGPPIRTDYRLIVENLS
SRCSWQDLKDYMRQAGEVTYADTHKGRRNEGVIEFRLYSDMKRALEKLDGTEVNGRKIRL
IEDRPGAKRRRSYSRSRSRSRSRSRSRRSRKSRSRSDSSSRSRSHSRAASRSRSRSRSKK
NKGKNKKEEEERSNGAQKNKDRSRSRSPKSKKGKKDGKKGKKDDSRSRSRSRSRSHSRSV
NKDRSRKSGSKGREPPKSDDEGGEPERGSRSRSRSPAESKSRARSKSKSKSKSRSPSPVK
ARSHSRSASRSESRSKSRSQSRSRSRSRS
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgggtgtacatcggaagactgagctacagggccagggagaaggacgtggagagg
ttcttcaagggctacgggaagatcctggaggtcgacctgaaaaacgggtatgggttcgtt
gaattcgatgacccccgtgacgcggacgatgctgtgtacgacttaaacggcaaggagctg
tgcggggaacgggtcatcgtggagcacaccaagggacctcgtcgtgacggaggttacggc
ggaagaagcacaaaagctgcatcaaaagaagacttgaaaggtggatatgggcgctgggga
agagacagatatggtccgccgattaggacagattatcgtctcattgttgagaatctttcc
agccgctgcagctggcaggacttgaaggactacatgaggcaggcaggggaggtgacttac
gccgacacccacaagggccggagaaacgagggagtgatcgagttcaggctctactccgac
atgaagagagctctggagaagctcgacggcacagaagtgaacggcagaaagatccgcctc
atcgaggatcgccccggggccaaacgcagacgctcttactcccgcagtcgcagccgctcc
aggtctcgctccaggagccgcagatctcgcaagagccgcagccgcagtgacagcagcagt
cgcagccgctcccactccagggcggcttcacgctcccgcagccgatctcgtagcaagaag
aacaagggcaagaacaagaaggaggaagaagagcgcagcaacggcgctcagaagaacaag
gaccgcagccggagtcgcagccccaagagcaaaaagggcaagaaagacgggaagaagggc
aagaaggacgactccaggtccagatctcgctctcgctccaggtctcactctcgatcggtg
aacaaggatcgctccaggaaatctggctcaaagggccgcgagccgcccaagagcgacgac
gagggcggcgagcccgagaggggctcccgctcccgttcacgctcgccagccgagtccaaa
tccagagccaggtctaaatcaaagtccaaatccaagtctcgttccccgtcacccgtcaaa
gcccgctcccactcccgatccgcctcccgctcagagtcccgctccaaatcccgctcccag
tctcgttctcgctcccgttcccgctcttag
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