KEGG   Larimichthys crocea (large yellow croaker): 104937372
Entry
104937372         CDS       T04659                                 
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
lco  Larimichthys crocea (large yellow croaker)
Pathway
lco03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lco00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104937372
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lco03041]
    104937372
Spliceosome [BR:lco03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    104937372
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40_Prp19 WD40 Beta-prop_THOC3 WD40_CDC20-Fz Beta-prop_WDR3_1st WD40_Gbeta Beta-prop_WDR3_2nd WD40_WDHD1_1st EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_EML NBCH_WD40 Beta-prop_Aladin Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_WDR41 WD_LRWD1 Beta-prop_IFT140_1st Ge1_WD40 eIF2A Beta-prop_WDR19_1st WD40_RFWD3 WD40_like Beta-prop_WDR11_1st Beta-prop_SPT8 Beta-prop_HPS5 Tricorn_2nd PSII_BNR Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 104937372
NCBI-ProteinID: XP_027132656
LinkDB
Position
Unknown
AA seq 286 aa
MSVLLIWNMIGSDGIRAMRRLEAARAQRDVAEATRAIRQQELHKNLRNLNNFCSQIGDDR
PISFCHFSPDSKMLATGSWSGLWTVGCPRLQPDSYTQELLSVPVCSYDNSWRLWDLEVQE
EILHQEGHSKGVHDLHFHPDGSLAATGGLDAFGRVWDLRTGRCVVFLEGHLKEIYSLNFS
PNGYHLATGSGDNTCKVWELRNRKCLYTVPAHQNLLSAVRFQPTDGHFLLTGAYDNTAKI
WSHPGWTPLKTLAGHEGKVMGVDVSPDGKLIATSSYDRTFKLWLSE
NT seq 861 nt   +upstreamnt  +downstreamnt
atgtctgttcttctcatctggaatatgattggttctgatggcatcagagcgatgaggcgt
ctggaggctgcacgtgctcagcgagatgttgctgaggcgaccagagcgatccggcaacag
gaactgcacaagaacctgagaaatctgaacaacttctgcagtcagatcggtgatgatcgg
ccaatcagcttctgccacttcagcccagactccaagatgctcgccactggctcctggagc
ggcctgtggactgtgggctgtcccagactgcaacctgattcgtacactcaagaacttctg
tctgtgcctgtctgtagttatgataactcgtggcgtctgtgggatctggaggttcaggag
gaaatcctccatcaggaaggtcacagtaaaggagtccatgaccttcacttccaccccgat
ggatcactggctgctactggaggtctggatgcgtttggcagagtgtgggatcttcggacg
ggacgctgcgttgttttcctcgaaggtcacctgaaggagatctacagcctgaacttctcc
cccaacgggtatcacctggcaacaggaagtggtgacaacacctgtaaggtgtgggagctg
aggaacaggaagtgtctgtacacagtccccgcccaccagaacctgctgtctgctgtccgc
ttccaacccactgacggtcacttcctgttgactggtgcgtacgacaacacagcgaagatt
tggagtcaccccggttggacgccgctaaagacacttgctggacacgaggggaaggtgatg
ggcgtcgacgtgtcacctgatgggaaactgatcgccaccagctcttacgaccggaccttc
aaactctggctgtcagagtga

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