Larimichthys crocea (large yellow croaker): 104937375
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Entry
104937375 CDS
T04659
Symbol
nphp3
Name
(RefSeq) nephrocystin-3 isoform X1
KO
K19360
nephrocystin-3
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lco03037
]
104937375 (nphp3)
Cilium and associated proteins [BR:
lco03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
104937375 (nphp3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_NPHP3
TPR_12
NPHP3_hel
TPR_10
NPHP3
TPR_1
TPR_7
TPR_8
TPR_2
TPR_MalT
TPR_16
NPHP3_N
AAA_16
TPR_19
TPR_11
NACHT
AAA_22
ATPase_2
DUF7273
KAP_NTPase
AAA_14
AAA
AAA_19
T2SSE
XRCC4_CC
Motif
Other DBs
NCBI-GeneID:
104937375
NCBI-ProteinID:
XP_010751898
LinkDB
All DBs
Position
XXIII:8973746..8982862
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AA seq
1316 aa
AA seq
DB search
MGTASSLVSPGEVIEDGYGGEGGEACEIPVEVKPKARLLRSSFRRGPRVIGASFKSTGSV
DLEYAAEYERLRKEYEIFRVSKNNEISSMQKKEAKLDEENKRLRAELQALQKTYQKILRE
KESALEAKYQAMERAATFEHDRDKVKRQFKIFRETKEKEIQDLLRAKRDLEAKMQQLQAQ
GIQVYDPNDSDSDDNQTTVTAAGTQCEYWSGGVLGSEPSMGSMMQLQQTFRGPEFAHSLI
DVEGPFANVSRDDWDAAVASLLQVSPHVPQALWSNTVRCYLIFTQETRAELDIFIKKHSP
VLRRMCEGLGHFYLNVCFPEENAAKYAVERRQEIERSSVCVLLLKSAVTSSVVEDCEEAF
VKNPDGHPLVLYLRTGEDHNLTEPTRQLLERINAADKAAKVKMPHGACADMFSTLTQVVD
HSGSAEEGADLIYAQLEKVIKQELLGLEGADVDSKDSGIEEGREEDSGDVLWDLHDEQEQ
IESYQQACNSTTSQLGFQKYIDRLNDMIAAPPPTPPLLVSGGPGSGKSLLLSKWIEQQQK
QSPNTLFLYHFVGRPLSTSSEPVLIIKRLTVKLLQHFWSISGLSMEPSKILEEFPRWLER
LSARHQGNIIIIIDSIDQIQQAERHMKWLIDPLPVNVRVVVSVNVETCPQAWRLWPTLHL
DPLSPREVRSVVNAECQSMDLKFTKDQEKKLERHCRSASTCNALYVTLLARMIISISCWS
LEKSLEQCLQCQDTMSLYRQALKMTLNSLNTDRERHIMREILCLVCASHNGVSESEVLDL
FPEVELPVLSSLLYRLNRLCFVTLRCGLIRFQHLQAWEAVRLEFLGGGSSSAAYREKLIH
YFSQQLSQDRVTWRVADELPWLLQQQEDRTKLQLSLLNLFVSQNLYKRGHFSELLAYWQY
VGKDKNSMATEYFDSLKHYEKSCESEDSMTKLANLYETLGRFLKDLGLPSQAVAPLQRSL
EIRETALDPDHPSVAHSLHQLAGVYVQWKKYGNAEQLYKQALEISENAYGAEHASVAREL
ESLAMLYQKQNKYEQAEKLRKMSVKIRQKTARQKGHMYGFTLLRRRALQLEELTLGKDSA
DCAKTLNELGVLYYLQNNLDAAKVFLTRSLEMRQRVLGPDHPDCAQSLNNLAALHTERRE
YETAEDMYERALDIRKKALSPDHPSLAYTLKHLAMLYKRRGKLEKAVPLYELSLEIREKS
FGPKHPSVATALVNLAVIYCQLKKHGDALPLYERALKVYEDSLGRSHPRVGETLKNLAVL
SYEEGDFEKAAELYKRAMEIKEAEPSLVCGNALSRHSSSGDTFSLRGPAPLPHVPR
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccgcatcctctttggtcagcccgggagaggtgatcgaagacgggtatgggggt
gaaggtggagaagcctgtgagatcccagtggaggtcaaacccaaagcccggctcctgcgc
agttccttccgcagaggacctcgggtgatcggggccagttttaagtccacgggctctgtg
gatctggagtatgctgcagagtatgaaagactgcggaaagagtatgagatcttccgtgtc
agcaagaataacgagatctcgtccatgcagaagaaggaggccaagctggatgaggagaac
aagaggctgagagctgagctccaggctctgcagaagacctaccagaagatcctcagagag
aaagagagcgcccttgaggcaaagtaccaagctatggagagagccgccacctttgaacat
gaccgggacaaagttaaacgacagtttaagattttccgggagacgaaagaaaaggagatt
caggatctcctgcgagccaagagggacttggaggccaagatgcaacagttgcaggctcag
ggcatccaggtctatgaccccaatgattctgactcagacgacaaccaaaccactgtcact
gctgcagggacacagtgtgaatactggtccggtggtgtgctgggaagtgagccctctatg
ggtagcatgatgcagctgcaacagaccttccggggcccagagttcgctcacagtctgata
gatgtggagggaccctttgcaaatgtcagcagagatgactgggatgctgcagtggccagt
ctccttcaggtctcccctcatgtgccccaggccttatggagtaacacagtgcgctgctac
ctgatcttcacccaggagaccagagctgagcttgatatctttattaagaaacactcccct
gtgttacggagaatgtgtgagggtctcggtcatttctacctgaacgtctgcttcccagag
gagaacgctgccaaatacgctgtggagcgcaggcaggagattgaaaggagctctgtgtgt
gtgcttcttctcaaatctgctgtcactagctctgtggtggaggattgtgaggaggctttt
gtgaagaatccagatggccatccgctagtgctctacctcaggactggagaagatcacaat
ttgactgaacccaccaggcaactgttagagaggatcaatgctgcagacaaagctgctaaa
gtgaagatgcctcacggtgcttgtgctgacatgttttcaacattaacccaggtggtggat
catagtggctctgcagaggagggtgccgacctgatttatgctcaactagagaaagtcatc
aaacaggagctgctgggtcttgaaggagcagacgttgactctaaggactctggtatagag
gagggacgagaggaagactcaggagatgtgctgtgggacctgcacgatgaacaggagcag
attgaatcctaccagcaagcctgtaacagcaccacctcccagttaggtttccagaagtat
atagatcgtttgaatgacatgattgcggctccccctcccacccctcctctgctggtgtct
ggtggtccaggctcagggaagtctctcctgctctccaaatggatcgagcagcagcagaag
cagtcccccaacaccttgttcctttatcattttgttggtcgcccactttccacgagctca
gagccagttctcattatcaaacgcctcacagtcaaactgctgcagcacttctggtctatt
tctggcttgtccatggaacccagtaagatcttggaggagtttcctcgctggcttgaaaga
ctgtcagcacggcatcaaggaaacatcatcatcatcatcgattctattgaccaaatacag
caagcagaaagacacatgaagtggctgattgaccctcttcccgttaacgtaagagtggtg
gtgtctgtcaacgtagagacgtgtcctcaagcttggaggttgtggcccacgctccactta
gacccactgagtcccagagaggtcagaagtgtcgttaatgcagagtgccagagcatggat
ctcaaatttactaaagaccaggagaagaagctggaaaggcactgtcgctctgcgtccacc
tgcaatgcattatatgtcacacttctggcaaggatgatcatcagtatatcatgttggtca
ctggagaagagcctggagcagtgtctgcagtgtcaggacaccatgtcactctaccgccag
gcactcaagatgacactgaactccctgaacacagacagagagcgacacatcatgagagag
atactgtgtctggtatgtgccagccataatggagtgagtgaatcagaggtactagacctt
ttcccagaagtggagttgccggtcctgtcctctctgctttaccgcctgaacagactctgc
tttgtaaccctccgttgtgggctcatcaggtttcaacacctgcaggcttgggaagctgtg
aggttggagtttctgggcggaggaagtagctctgctgcttacagagagaaactcatacat
tacttcagtcagcaactcagccaggaccgggtgacttggcgtgttgcagatgagctgccc
tggctgctccaacagcaggaggataggactaaactacagcttagcctcctgaacctgttt
gtctcccaaaacctctacaagagggggcatttctctgagctgctagcttattggcaatat
gtaggcaaagacaaaaactccatggcaactgagtactttgactccctgaaacactatgag
aagagctgtgagagcgaagacagcatgaccaagctggcaaacttgtatgagaccttggga
cgcttcctcaaagacctgggcctccctagtcaggctgtagcccctttacaaaggtccctt
gagatccgggagacagccttggacccggaccatcccagcgtagctcactccctgcaccag
ctggccggggtttatgttcagtggaagaagtacggcaacgctgagcagctgtacaagcag
gccctggagataagtgagaacgcctatggagccgagcatgccagcgtggcacgagagctg
gagtcacttgcgatgctctatcagaaacaaaacaagtacgaacaagccgagaaactcagg
aagatgtcagtaaagatccgtcagaaaactgctcgccagaaaggtcatatgtatggcttc
actttgttgaggcgcagagccctacagctggaagagctgaccctgggaaaagattctgca
gactgtgccaagacacttaatgaactgggtgtcctgtactacctccaaaacaacctggat
gcagccaaggtattcttgacacgctctctggagatgcgtcagcgtgtccttgggccagat
cacccagattgtgctcagtccctcaacaacctggctgcattgcacacagagaggagggag
tatgagacagctgaggacatgtacgagagggcgctagacattcgcaagaaggccttgtcc
ccagaccacccgtcgctggcatacacgctcaaacacctggccatgctctataaacgcaga
gggaagctggaaaaggcagtgccgctgtatgagctgtctctggaaatcagggaaaaaagt
tttgggcccaaacatcccagtgtggccacagcactggttaatctggctgtaatctactgc
cagctgaagaagcacggtgacgccttgcctctttatgaacgggcactgaaagtgtatgag
gatagtttggggcgttcacacccacgagtcggagagaccctaaaaaacctggctgtgctg
agctacgaagagggcgatttcgagaaggcggcagagctttacaaacgtgcaatggagata
aaggaggcagagccatcgttggtgtgtgggaacgctctgtcacgtcactcctccagcggg
gacacgttcagtctgagaggacctgctcccctcccacatgtcccgaggtga
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