Larimichthys crocea (large yellow croaker): 104937459
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Entry
104937459 CDS
T04659
Symbol
srsf5
Name
(RefSeq) serine/arginine-rich splicing factor 5 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03040
Spliceosome
lco05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104937459 (srsf5)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
104937459 (srsf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lco03041
]
104937459 (srsf5)
Spliceosome [BR:
lco03041
]
Common components
Common spliceosomal components
SR proteins
104937459 (srsf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
RRM_5
Nup35_RRM_2
CoV_nucleocap
CDC45
Motif
Other DBs
NCBI-GeneID:
104937459
NCBI-ProteinID:
XP_010751988
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All DBs
Position
XXIV:2699048..2704912
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AA seq
297 aa
AA seq
DB search
MSGCRVFIGRLSPHARERDVEKFFKGYGRIREINLKNGFGFVEFDDHRDADDAVYELNGK
ELCSERVTIEHARSRRGRGGGPGMGRFGGGGGGGGGGGGGYRPSRSSGSRPDRYGPPVRT
DHRLIVENLSSRISWQDLKDLMRKAGEVTFVDAHRPNKNEGVVEFASRSDMKNAIAKLDG
TELNGRKLKIFEDSRSHSKSRSRSRSYSRSKSRSRSRNRSRSRSRSASRTPERRSSGGGK
PAARSPSRSKSRSKSRSRSRSRSPAPVQNKQSRSRSRSRSRSRSRSRSRSASADSKH
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgagtggttgtcgcgtcttcattggccgcctgagcccgcacgccagagagagagacgtg
gagaagtttttcaagggttacggacgtattcgggagatcaacctgaagaacgggtttggc
tttgtggaatttgacgaccacagagatgcagatgatgccgtgtacgagctgaatggcaaa
gagctgtgcagtgaaagggtcacgatcgagcacgctcgctccaggagaggaagaggcggc
ggccccggaatgggacgtttcggtggcggaggcggcggtggtggtggcggcggaggtggc
taccgcccgtctcgcagcagtggatccagaccggacaggtatggccctcctgtgcggacc
gaccacagactcattgtggagaacctctcttcacggatcagctggcaggacctgaaagac
ctgatgagaaaagcaggtgaagttacctttgtggacgcccacaggcccaacaaaaatgaa
ggagtggtcgagtttgcatctcgcagcgacatgaagaacgcaatcgccaagctggacggg
acggagttgaacggacgcaagctgaagatctttgaggacagcagaagtcacagcaagagc
cgctcccgttcccgcagctactcgcgctcaaagagtcgctccaggagccgcaaccgctcc
aggagccgctcccggtccgccagccgcaccccggagaggaggtcatcaggagggggcaag
cccgccgccagatccccctccaggtccaagtctcgctccaagtcccgctccaggtctcgc
tcccgctcgcccgcccccgttcagaacaaacagtcccgctctcgttctcgctctcgctcc
cgatctcggtcccgctcacgttcccgctcggcctcagcagacagtaaacactga
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