Larimichthys crocea (large yellow croaker): 104937656
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Entry
104937656 CDS
T04659
Symbol
nfatc4
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 4
KO
K17334
nuclear factor of activated T-cells, cytoplasmic 4
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04020
Calcium signaling pathway
lco04148
Efferocytosis
lco04218
Cellular senescence
lco04310
Wnt signaling pathway
lco04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
104937656 (nfatc4)
04020 Calcium signaling pathway
104937656 (nfatc4)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
104937656 (nfatc4)
09143 Cell growth and death
04218 Cellular senescence
104937656 (nfatc4)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
104937656 (nfatc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lco03000
]
104937656 (nfatc4)
Transcription factors [BR:
lco03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
104937656 (nfatc4)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
TIG
Motif
Other DBs
NCBI-GeneID:
104937656
NCBI-ProteinID:
XP_010752241
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Position
II:complement(5109248..5121469)
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AA seq
907 aa
AA seq
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MGAAPGSGWEEGEFEFKLVFEEDPPPRQSQGPSPVRTAEPESSVPGEESEGALLHLDPSN
NSSSSLVTDNHMAATHAGHSINIPSPPPSANQRAGMHSPPPRRAPVREFSGTYESLPARS
VQVSESRVVECPSIQITTISPEDDPAPTISTYWDMGGGGGWDRERLYLPLLDPFTYRDRC
PGSLSPSPASSPSSRGWLSPASSCDSLLVEEEELNDATLNFALSPSSRPTSPGGKKRRNS
PLASPCTSRRGSYSEDLQGCNLEGGDSITLSQASPSSCELSIPQKTRKTSLEQLSPREVD
QEQAPGHSSPCLLPETQQIRREPPSLGMDYLSVPPALAWGRTRASAHSPLFRSNALPPLD
WPLPSQFDQYELRIEVQPRPHHRAHYETEGSRGAVKAAPTGHPIVKLCGYAERKPLSLQV
FVGTADDRSIRPHPFYQIHRVTGKMVGTASHESVQAGTKLLDIPLNPENNMTALIDCAGI
LKLRNSDIELRKGETDVGRKNTRVRLVFRTHLPLAPPVAPPGRVLALQVASLPIECSQRS
AQELPVIESVSLTSCSVEGGEELLLSGSNFLPISRVLFMERGTDGKLQWEEEAHVDRDNS
NECLLCVRVPAYSDMSVSRPVSVSLYVSNGKRKRSSTHCFKYLPIMFKEEDPLLSRPSVL
PLDGGPVCPVGGQPRMDRGFHVRGDPMADDRSLGFHLPPYPSTYSPPCPTMGYHEEYCSK
PDAPVEEPGGSRAALSERQPSFKNLELGFTELLPPLYPHGPQPPSPSPSPWLDSPYLSSS
PSPSHSSSLSPFPAGSPISTSPLPPMPTSPYPQYSAYPQEVCPSPPSNPSPYQDICQTPY
SHYDGWDPQGRVLGTGHGGERDAKIQDCPLEFTSSASMHHITFEEVSEFIGEDIQLYQSS
HMDNQPN
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgggggccgcgccgggctcgggttgggaggagggcgagttcgagttcaagttggttttt
gaggaggacccgccgccaaggcagagccaggggccatccccggtgcgcacagccgagccg
gagagctccgttcccggggaggagagtgaaggcgccctgctgcacctggacccctccaac
aacagcagcagtagcctggttacagataaccacatggctgccactcatgcaggacactca
atcaacatccccagcccgccaccctcggccaatcagcgggccgggatgcattccccgcct
ccacggcgggcccctgtcagagagttcagcgggacctatgagagcctgccggcacgctct
gtacaggtttcagagtctcgtgtggtcgagtgtcccagcatccaaataaccacaatctcc
cctgaagacgacccagcaccgaccatctccacttattgggacatgggtggcggtggtggg
tgggaccgggagcgcctttacctccccctgctggaccccttcacttaccgtgacaggtgc
cctggctccctcagtcccagccctgcctccagcccgtcctcccgcggatggctcagccca
gcctccagctgcgactccctgctggtggaggaggaggagctgaacgatgctacgctcaac
tttgcgctctctccgtcctcgaggccgacttcccctgggggtaaaaagcgcagaaactcc
cccttggcctcaccttgtacctcacggaggggcagctactcagaggacctgcagggatgt
aaccttgagggtggagactccatcactttgtcacaagcttcgcccagcagctgtgagctc
agcatcccacagaaaacaaggaagacgtcattggaacagttgtctcccagggaggtggac
caggagcaggctccaggccacagctccccctgcctgctgccagagacccagcagatcagg
agagagcccccctcgctgggtatggactacctctctgtgccccctgctctagcctggggc
cggacccgagccagcgcccacagccctctgttcaggtctaacgccctgccaccactcgac
tggccgctgccgtcccagtttgaccagtacgagctgcgcatcgaggtgcagccgcgtcct
caccacagagctcactatgagacggaggggagcagaggagccgtcaaagctgcaccgacg
ggtcatccgatcgtcaagctgtgtggttacgcagagaggaagccgctctccctccaggtt
ttcgttggaacagctgacgaccgatcaatcaggccacatcctttctatcagatacacagg
gtgacagggaagatggttggtacagccagtcatgagagcgtccaagcagggaccaaactg
ctggacatccccctcaatcctgagaacaacatgactgcactcatcgactgtgctgggatt
ctgaagctgaggaactcggacatcgagctgaggaaaggagaaacagacgttggaaggaag
aacacacgtgttcgtttggtgtttcgtacccaccttcctctagcgccccctgtagccccg
cctggccgagtcctggctctgcaagttgcctccctgcccatagaatgctcccagcgctcg
gctcaggagctgcccgtcatcgagtctgtcagtctcacttcctgctctgtggagggagga
gaggagcttctgctgagcggctcgaacttcttgccaatctccagagtccttttcatggag
agagggacagatggtaaattacaatgggaggaggaggctcatgtcgaccgtgacaacagc
aatgagtgtttgctgtgtgtgagggttcccgcctacagcgacatgtccgtcagtcggccg
gtgtcggttagtctttacgtctccaacgggaagaggaaaaggagcagcactcactgcttc
aagtatctccccattatgttcaaagaggaggacccgctgctgtcccggccctctgtgctg
cctctcgatgggggacctgtgtgtcctgtggggggtcaacccaggatggacaggggcttc
cacgtgagaggcgaccccatggctgatgatcgaagcctgggcttccacctgcctccctat
ccttccacctactcccctccgtgccccacgatgggttaccatgaggagtactgctctaaa
cccgacgctccggtggaggagcccggcgggtccagggcagccctgtccgagcgtcaaccc
agcttcaagaaccttgagctgggcttcaccgagcttcttcccccgctgtaccctcatggt
ccgcagcctccctccccctctccttccccgtggctggactcaccttacctgtcctcctca
ccttctccctcccactcctcctctctcagcccgtttcctgctggcagtcccatctcgacc
tcccctctgcctcccatgcctacctccccttacccccagtactctgcttatcctcaggag
gtgtgtccctcccctccctccaaccctagcccatatcaggacatctgccaaacaccttac
tcccactacgacggctgggacccccaaggaagagtgctggggacgggacatggaggagag
agggatgccaagatccaggactgtcccctggagtttaccagctctgcctctatgcaccac
atcacatttgaagaagtgtcggagttcatcggggaggacatccagttgtaccagtcatca
catatggacaaccagccaaactga
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