Larimichthys crocea (large yellow croaker): 104937711
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Entry
104937711 CDS
T04659
Name
(RefSeq) amyloid-beta A4 protein isoform X1
KO
K04520
amyloid beta A4 protein
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
104937711
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lco01002
]
104937711
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
lco00535
]
104937711
00536 Glycosaminoglycan binding proteins [BR:
lco00536
]
104937711
Peptidases and inhibitors [BR:
lco01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
104937711
Proteoglycans [BR:
lco00535
]
Cell surface proteoglycans
Others
104937711
Glycosaminoglycan binding proteins [BR:
lco00536
]
Heparan sulfate / Heparin
Others
104937711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APP_E2
APP_N
APP_Cu_bd
APP_amyloid
Beta-APP
Kunitz_BPTI
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
104937711
NCBI-ProteinID:
XP_027147487
LinkDB
All DBs
Position
XIX:5783189..5799620
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AA seq
760 aa
AA seq
DB search
MGLLAEPQVAMFCGKLNMHINVQSGKWEPDPSGTKSCIGTKEGILQYCQEVYPELQITNV
VEANQPVSIQSWCKKGRKQCRSHMHIVVPYRCLVGEFVSDALLVPDKCKFLHQERMNQCE
SHLHWHTVAKESCGDRTMNLHDYGMLLPCGIDRFRGVEFVCCPAEAEHDADSAEQDADDS
DVWWGGAETDYSDNSMVREPEPTEQQEETRPSVVEEDEEEEEAVEEDDEEEEEEADVLDN
DQDGDGEEDEEVTAEDEELEEDEEEEEGDDDIVDDSDDEPTTNVAMTTTTTTTTTESVEE
VVRDVCTANAETGPCRAMLPRWYFDRQEGRCAQFIYGGCGGNRNNFESEEYCLSVCSSVI
PTATPSSPDAVDHYLETPADENEHAHFQKAKESLEAKHRERMSQVMREWEEAEREAKNLP
RADKKAVIQRFQEKVEALEQEAASERQQLVETHMARVETLLNERRRLALESYLTALQQDQ
PRPRHVFSLLKKYLRAEQKDRQHTLKHFEHVRMVDPKKAAQIRPQVLTHLRVIEERMNQS
LGLLYKVPGLADDIQDQVELLQREQAEMAQQLANLQTDVRMSYGNDALMPDQELGDGQTD
FLPQEDTLGLGGIGFIHPESFNQPNTENQVEPVDSRPNLDRGVPTRPVTGMKMEAIPELR
METEDRQSTEYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIATVIVITLVMLRKKQYTS
IHHGVIEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgggtctgttggcggagccccaggtggccatgttttgcggtaaactcaacatgcacatc
aacgtgcagagcggcaagtgggagccggacccctcgggcaccaagagctgcatcggcacc
aaggagggcatcctgcagtactgccaggaggtgtacccagagctccagattaccaatgtg
gtggaggccaaccagccagtcagcatccagagctggtgcaagaaggggcgcaagcagtgt
cgcagtcacatgcacatcgtggtgccgtaccgctgcctggtgggagagttcgtgagtgac
gccctgctcgttcctgacaagtgcaagttcctccaccaggagcgcatgaaccagtgtgag
agccacctgcactggcacactgtcgccaaggagtcttgcggagaccgcaccatgaacctc
cacgactacggcatgctgttgccgtgcggtatcgaccgtttccgcggagtggagtttgtc
tgctgtcccgcggaggcagagcacgacgccgacagcgccgagcaggacgccgatgattcc
gacgtctggtggggcggagcggagaccgactactctgacaacagcatggtgcgggagcca
gagccaacagagcagcaagaggaaaccaggccatctgtggtagaggaggacgaggaagag
gaggaggccgttgaggaagacgacgaggaagaggaggaggaagcggacgtgctagacaac
gaccaggatggagacggagaagaggacgaggaggtgacggcggaggacgaagagttggag
gaggatgaggaggaggaggagggagacgacgacattgtggacgacagcgacgacgagccc
accaccaacgtcgccatgacgaccaccactaccaccaccaccacggagtctgtggaagag
gttgtcagggatgtgtgcacggccaacgcagagactggtccatgccgggccatgctgccc
cgctggtactttgaccgccaggagggccgctgtgctcagtttatctacggcggctgcgga
ggcaacaggaataactttgagtccgaggagtactgcctgtctgtctgcagcagcgtcata
cccacagccactcccagctcccccgacgccgtggaccactacctggagacgcctgctgac
gaaaacgaacacgcccacttccagaaggccaaagagagcctggaggccaagcaccgcgag
aggatgtcacaggtgatgagagagtgggaggaggccgagagggaagctaagaatcttcca
cgcgctgacaagaaggccgtcatccagcgtttccaggagaaagtggaggccctagagcag
gaggcagccagcgaacggcagcagctggtggagacccacatggcccgggtggagactctg
ctcaacgaacgccgccgcctggcactggagagctacctgactgcgctgcagcaggaccaa
cccaggccccgccacgtcttcagcctgttgaagaagtacctgcgtgccgagcagaaggac
aggcagcacaccctcaaacactttgaacacgtccgcatggtggaccccaagaaggcagcg
cagatcagacctcaggtgctgacccacctgcgtgtcatcgaggagcgcatgaaccagtct
ctgggactcctctacaaggtgcccggtttggccgacgatatccaggaccaagtcgagctc
ctgcagagggagcaggcggagatggcccagcagctggccaacctgcagacggacgtgagg
atgagctacggtaacgacgccctgatgcccgaccaggagctgggagacggccagaccgac
tttttgccccaggaggacactctgggattggggggaatcggcttcatccaccccgagagc
ttcaaccagcccaacactgagaaccaggttgagccagtggactcacgcccgaaccttgac
agaggcgttcccacacggccagtgactggaatgaagatggaagctattcctgagctgcgg
atggagacggaggacagacagagcactgaatatgaagttcaccaccagaaactggtcttc
ttcgccgaggatgtgggttccaacaagggggcgatcatcggcctgatggtcggaggcgtc
gtcatagcaaccgtgatcgtcatcaccctggtgatgctgaggaagaagcagtacacctcc
atccaccacggagtcatcgaggtggacgccgccgtcacccccgaggagcgccacctgtcc
aagatgcagcagaacggctacgagaacccgacctacaagttctttgagcagatgcagaac
tga
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