Larimichthys crocea (large yellow croaker): 104937801
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Entry
104937801 CDS
T04659
Symbol
lsm5
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03018
RNA degradation
lco03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104937801 (lsm5)
09123 Folding, sorting and degradation
03018 RNA degradation
104937801 (lsm5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lco03019
]
104937801 (lsm5)
03041 Spliceosome [BR:
lco03041
]
104937801 (lsm5)
Messenger RNA biogenesis [BR:
lco03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104937801 (lsm5)
mRNA degradation factors
5'-3' decay
Lsm complex
104937801 (lsm5)
Spliceosome [BR:
lco03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
104937801 (lsm5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
104937801
NCBI-ProteinID:
XP_010752413
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All DBs
Position
XXIII:2370336..2372886
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AA seq
91 aa
AA seq
DB search
MAATPATNPSQLLPLELVDKCIGSRIHIVMKTDKEIVGTLLGFDDFVNMVLEDVTEFEIT
PEGRRITKLDQILLNGNNITMLIPGGEGPEV
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcggctactccggctacgaacccgtcccagctgctcccgctcgagctcgtggataaa
tgtattggctcccggattcacatcgtcatgaaaaccgacaaagaaatcgtcggcaccctg
ctgggcttcgacgactttgtcaacatggtgctggaggacgtgacagaatttgagatcaca
ccagagggaaggaggataaccaaactggaccagatcctcctcaacggcaataacatcacc
atgctcatacccggaggagaaggtcctgaagtatga
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