Larimichthys crocea (large yellow croaker): 104937904
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Entry
104937904 CDS
T04659
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
104937904
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lco02000
]
104937904
Transporters [BR:
lco02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
104937904
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
104937904
NCBI-ProteinID:
XP_019130022
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Position
III:complement(28371694..28378609)
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AA seq
584 aa
AA seq
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MPGSLTHHGSPNPGYSSNNVPVTVITQTDSRDKWSKKMDFLLSVIGFAVDLGNVWRFPYI
CYQNGGGAFLIPYILMAIFGGVPLFYMELALGQFHRTGAISIWKHICPIFKGIGYAICII
TLYVSFYYNTIIAWALFYFYSSFSSILPWTNCDNVWNTPDCTNYFDMNNVTWTNSSKSPA
EEFYTRNVLEIHKSSGLRNVGGLRWQLMLCLFLIFTIVYFSLWKGVKTSGKVVWVTATLP
YIVLFILLIRGATLPGAWKGVVFYLKPQWGKLLETSVWVDAAAQIFFSLGPGFGVLLALS
SYNPFTNNCYRDAIVTSLVNCLTSFVSGFVIFTVLGYMAEMRNVKVEDVAKDKGPSLLFI
TYPEAIANMTGSTFFAIIFFVMMITLGLDSTFGGLEAIITAVLDEYPDHLYHRRELVVLC
LVVVCFLGSLSTLTNGGAYVVKLLEEFGVGCSIIAVGFLEAIAVSWFYGINRFCNDVQAM
LGKAPGLFWRVCWVAISPAFLAYIIVSSLLKAPPLTLFEYKYPDWSITVGYIIGFSSFMW
IPIYMVYKLVWTPGSLKQRLAVCLRPERTIPDIHADTLNMATVP
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgcccggcagtctgacccaccacggctctccgaaccccggctacagctccaacaacgtc
ccggtgacggtcatcacacagacggactccagggacaaatggagcaaaaagatggatttt
ctcttgtctgtcattggctttgcggtggacctgggaaatgtttggagatttccgtacata
tgttatcagaacgggggcggtgcttttctcattccctacattttgatggccatctttggt
ggcgtgccactcttttacatggagctggcactgggacagtttcacagaaccggagccatt
tccatatggaaacacatctgtcccattttcaaaggtataggatacgccatttgtatcatc
actctctatgtctccttctactacaacaccatcatcgcctgggccctcttctacttctac
tcctccttctccagcatcttgccttggacaaactgcgacaatgtgtggaatacccctgac
tgcaccaactattttgacatgaacaacgtcacctggacgaattcctccaagtctccggca
gaggaattttacacgaggaacgttcttgagatccacaagtcgtcagggctgagaaatgtc
gggggtcttcgctggcagttgatgctctgcctttttctcattttcaccatcgtatatttc
agcctgtggaaaggcgtgaagacttcagggaaggtagtgtgggtgactgccaccttgccc
tacatagtgctttttatccttctaatccgaggcgccactctgccgggagcctggaaaggt
gttgtcttttacctaaaacctcagtgggggaagctgctggagaccagtgtgtgggtggat
gctgctgctcagatattcttctctctggggcctgggttcggggtgctcctggcgctctcc
agctataaccctttcacaaataactgctatcgtgacgctattgttaccagtttggtgaac
tgtctgaccagctttgtgtcggggttcgtcatcttcacagtgctgggatacatggcagag
atgaggaacgtgaaggtggaggatgtagccaaggataaaggaccaagtttactcttcatc
acctacccagaagccattgcaaacatgacaggctcaaccttttttgcaatcatctttttt
gtgatgatgatcacgctgggactggacagcacgtttggtggcctggaggcgatcatcact
gctgtgttggatgaataccctgatcatctctatcacagacgggaacttgttgttctgtgc
ttggtggttgtttgctttttgggctctctaagcacccttacaaatggtggtgcatatgtg
gtgaagctgctggaggagttcggagtaggatgctccattatagctgtgggtttcctcgag
gccatcgcggtttcctggttctacggtatcaacagattttgcaacgatgtccaagccatg
ctgggcaaagctccaggattattctggagggtgtgctgggttgccatcagcccagcattt
ctagcatacattatagtgagctccctgctgaaagcaccgcctctcacgctgtttgaatat
aagtaccctgactggagcatcacagtgggatacatcatcggcttctcatccttcatgtgg
atccccatctacatggtttacaagctggtgtggactcctggatctctcaaacagaggttg
gcggtgtgtctcagaccagagaggaccataccggacatccacgctgacaccctcaacatg
gctaccgtgccatag
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