Larimichthys crocea (large yellow croaker): 104938167
Help
Entry
104938167 CDS
T04659
Symbol
lcmt2
Name
(RefSeq) tRNA wybutosine-synthesizing protein 4
KO
K15451
tRNA wybutosine-synthesizing protein 4 [EC:
2.1.1.290
2.3.1.231
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lco03016
]
104938167 (lcmt2)
Enzymes [BR:
lco01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.290 tRNAPhe [7-(3-amino-3-carboxypropyl)wyosine37-O]-methyltransferase
104938167 (lcmt2)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.231 tRNAPhe {7-[3-amino-3-(methoxycarbonyl)propyl]wyosine37-N}-methoxycarbonyltransferase
104938167 (lcmt2)
Transfer RNA biogenesis [BR:
lco03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
104938167 (lcmt2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
LCM
Kelch_5
Kelch_4
Beta-prop_ATRN-LZTR1
Kelch_3
Kelch_6
Kelch_2
Kelch_1
RAG2
NANM
Motif
Other DBs
NCBI-GeneID:
104938167
NCBI-ProteinID:
XP_010752825
UniProt:
A0A6G0J8B2
LinkDB
All DBs
Position
XVIII:complement(1695228..1704033)
Genome browser
AA seq
674 aa
AA seq
DB search
MPSTDRKKQKQGRDTAVQGTNDSSVVSKVSAAAQGYFQDVFLQHFVCKVARRAPLINRGY
YVRWRAVDHCVRRFLHITENCPKRQILSLGAGFDSLYFRLHAHEALDRTVVFEVDFPDVA
RRKAALINSNITLRGMIDSSLPSLTGPLYVSSSQYHLLGVDVREESQVEEALGAAGLDWA
APTLILSEVVLTYMETQWSDAVISWAAKLLPQSLFVIYEQIHPYDPFGRIMQDHFLKLNS
TLHALRQYPDTAAQRHRFLDKGWEQCVCLDMNVFYLGLVPEEERCRVENLEPFDEYEEWH
QKCSHYFILTASRGSLMAQALLTHAPVSPVPSICPSWSHTALNVQTVPVCMEGLGMATSL
VRPGHVLLTGGCSRGGRGEMTRILLRGQEGWKSVSVEPSVDLGVRLYHTVTSLPRGGVVV
YGGRSSPLNPIRSLFRVTLEPGSSEGGQDTLKLCVEEMVCTGDPPPARWRHTAAVVSHSG
KDFLFVFGGKNETEAALGDGYFLCQDQQHWTEMSVEGAAPEARHSHSACSYQGGLVLFGG
VDRRGVPLGDTAVLRPNERGFSWERIKVQPPPVPRYSHSAHVIGEKLVVVGGVWLHSDGV
PGALIINLSTHSSVEFSLDTTLVPWPLMLHSFCSELTDPEEPELLLIGGGGNCFSFGTHF
NLQPVAVDLRPVLG
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgcccagcacagacaggaagaagcagaagcaggggagggacacggcggtccagggaacc
aacgacagcagtgtggtgagcaaggtgtctgctgcagcgcagggctacttccaagatgtc
ttcctccagcactttgtgtgcaaagtggcccggagagctccacttatcaacaggggctac
tatgtgcgctggagagctgtggatcactgcgtgaggagattcctgcacattactgaaaac
tgtcccaagagacagattttgtcactgggcgcagggttcgactctctgtatttccgcctc
catgcacatgaagcacttgacaggactgttgtgttcgaggtagattttcctgatgttgcc
cggcgcaaagctgccctgatcaactctaatatcacactgagggggatgatagactccagt
ttaccttctcttacaggacctctgtatgtgtctagcagtcagtaccatctgctaggggtg
gatgttagagaggagtctcaggtggaagaggctctgggtgcggctgggctggactgggct
gcccctactctaatcctctctgaagtggtgcttacctacatggaaacacagtggtctgat
gctgtcattagttgggcggcaaagctcttgccacagtcgctctttgttatatatgagcag
atacatccatatgatccctttggtcggataatgcaagatcattttctgaaactaaattcg
actctgcacgccctccgacaatacccagacactgctgcacagagacacaggttcctggac
aagggctgggagcagtgtgtgtgtctggatatgaatgtcttctacctcgggctggtcccc
gaggaggagagatgcagagtggaaaacctggagccttttgatgaatatgaggagtggcac
cagaaatgttcccactacttcatccttactgcatctcgaggctctttgatggcacaggct
ttactcacacatgctccagtgtctccagtgccttccatctgcccatcgtggagtcacaca
gccctgaatgtgcagacagtaccagtttgtatggaggggctggggatggctacctccttg
gtgagaccagggcatgtcctgctaacaggaggctgtagcagaggaggcaggggggaaatg
actaggatcctcctgaggggccaggaaggctggaaatctgtcagtgtggaaccatcagtc
gatttgggcgttaggctctaccacactgttacctctcttcctagaggaggtgttgttgta
tacggtggacgctcctctcccctcaacccaatcagaagccttttcagagtgaccctggag
cccggtagttcagagggaggacaagacacactgaaactctgtgtggaggagatggtctgt
acgggtgatccaccgccggcaaggtggaggcacactgctgctgtggtcagtcacagtggc
aaagactttctgtttgtgtttggtggaaagaatgaaactgaggcggctctaggtgacggc
tacttcctgtgtcaagaccagcagcactggactgagatgtcagtagagggcgcagctcca
gaggcccgccattcgcactcagcctgttcatatcaaggaggtctggtgctgtttggagga
gtggacagaaggggagtgccgctgggggacacagcagtattacggccaaatgagagaggc
ttctcctgggagagaatcaaggtgcagccgccgcctgttcccaggtactcccattctgct
catgtgattggggaaaagctggttgtggttggaggagtttggctgcattctgatggtgta
ccaggcgctctcattatcaacctgagcacacacagcagtgtggagttcagtctggacacg
accttggtgccctggcctctgatgctccactcattctgctctgagcttaccgacccagag
gaaccagagcttcttctgataggaggtggaggaaactgtttctcgtttgggactcacttc
aaccttcagcctgtcgctgtggacctcagacctgtgctgggatga
DBGET
integrated database retrieval system
