Larimichthys crocea (large yellow croaker): 104938266
Help
Entry
104938266 CDS
T04659
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-3
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
104938266
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lco04040
]
104938266
Ion channels [BR:
lco04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
104938266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
104938266
NCBI-ProteinID:
XP_027137067
LinkDB
All DBs
Position
VIII:32098312..32116867
Genome browser
AA seq
1141 aa
AA seq
DB search
MSKHCSSPAPGSQPGVLTWISGALPQPAVSPKLSQANSMTKEENATTSKPEDDKGMIAWI
AQGLEKVVPQPDLKSRDPAPAEPPAEVRPAPPAAAAEPQVTAAKVETDKDKTTSATTDNK
PLPPRMIDWIKQGIEKAIPQPEIPIRSKAEEKPEAPASAKAEPPAPEPAAPKPATDTDKP
SKEAEQQPNMVGWIVSGIGRIFPQPVPKQDAGSDDVQNISIGQKSTDLVLEDIEQDNDKE
AKQEKETEDAGTAVTDSIEKEERLQEERLEAARIAEEMARKAAEEAVRQLEVEHSAKIVI
ETLPESNEQLPNILEEENEDDPELQNLQEDTEDNTDNRSPEGNKKTTVDEEKKTDQCAPD
LCPPKEQDTPSSTAVEPASEKRDLESPVTQQPEPQAPEAPTTTTEEAKAAGAAEGGEGSG
GKGLGGAPALKVEDVGLKLPQILSPTGDLSADEDDGELSRADLRSNQGDFLTADDDTRPL
SAASVGSVVIQDRLNQLVVLFKGRTELRKERLVDPDESEEESPSSPSKAPPAPPPPPPPP
PGDEKKDEAPAAKEEEEEEKDLELPFKILGRPVKIPRLSKYLKLPKLPKVPDWLRPIVEY
RFPSSIDPFTDLIYVIWLFIVVAAWNWNVWLIPVRWAFPYQTPENIHVWLLIDYTCDLIY
ITDILVFQTRLQFVRGGDIVCDKKDMRENYMSTERFKMDVISLFPMEVFYYFTGVNSLLR
FPRLFKYMAFFEFNDRMEAVMKKAYIYRVIRTSTYLLYSLHINACLFYWGSDYEGLGSTK
WVYNGKGFAYIRCYYFAVKTLITIGGLPDPTTVFEICFQNINYFVGVFAFSIMIGQMRDV
VGAATAGENYYRACMDSTVKYMNSYNIPREVQNRIKTWYDYTWKSQGMLDEQELLIQLPA
KMRLDIAVDVNYAIVSKVALFQGCDRQMVFDMLTRLKSVVYLPGDFVCKKGEIGREMYII
KQGEVQVVGGPDLQTVFVTIRAGSVFGEISLLAGGGGNRRTANVKAHGFANLFILDKKDL
AEILVHYPESQKLLRKKAKTMLTKDKKPDEKGGGKEVVVIPARPDTPKMFKAALKVAEQA
GIEGAFTKLRESYRPSDGTEDVAPPPSPAPGHGADSSMVIRMTSREAGEEVLIVEEKKKT
E
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaacactgttccagcccggcgcccggctctcagcccggtgtgttgacctggatc
agcggcgctctgcctcaaccggcggtctcaccgaagctgagccaagccaactccatgacc
aaggaggaaaatgcaacaaccagtaaacctgaagacgacaaagggatgattgcttggatc
gctcagggtttggagaaagtcgttcctcagcctgatctgaagagcagagatccagcaccg
gccgagccgcccgctgaggtgcgtccagcaccgcctgcagcagctgcagagcctcaggtg
accgcggcgaaggtggaaacagacaaagacaaaactacatcagcaacaactgacaacaaa
cccctcccacccaggatgatagactggatcaaacagggcatcgagaaggcgattcctcag
ccggagattcctatccgctcaaaggcagaagagaagcctgaagctcctgcttcagccaaa
gcagaacctccggcaccagaacctgcagccccaaaacctgccactgacactgacaagcct
tccaaggaagcagagcagcagcccaatatggtgggctggatcgtcagtgggattggtcga
atcttccctcagcctgtaccgaagcaggacgctggcagcgacgatgtgcagaacatcagc
atcggacagaagagtacagacctggtgctggaggacatcgaacaggacaatgacaaggag
gccaaacaggagaaggagacagaagatgcaggtactgcagtgacggatagcatcgagaag
gaggaaagactgcaggaggagcgtctggaggcggcccgcatcgcagaggagatggccagg
aaggcagcggaggaggcagtccgacagctcgaggtggagcattcagctaagatcgtcata
gaaacgctaccagagtccaacgagcaactgcccaacatcctggaggaagaaaacgaggac
gacccagaattgcagaacctgcaggaggacacagaagacaacacagacaatagaagtcca
gagggaaataagaaaaccactgttgatgaagagaaaaaaacagaccagtgtgcgccggac
ctctgtccaccgaaagagcaagacactccgtcatcgacagctgtggaaccagcatcggag
aagagagacctggagagtccggtcacccaacaaccagagccacaagccccagaagccccg
accacgaccacagaagaggccaaggcagcgggagcagcagaaggaggtgaagggagtggt
ggtaaaggtttgggtggagctccggctctgaaggtggaggacgtgggcctgaaactcccc
caaattctcagtcctacaggtgatctgtctgcagatgaggacgatggggagctgtcgagg
gctgatctgagatccaatcagggcgactttctgacggcagacgatgatacgcgccctctg
tcggctgccagtgtcggcagcgtggtgatccaggaccggctgaaccagctcgttgtgctt
tttaaaggtcgcacagagctacgaaaagagcggctggtggacccggatgagtctgaggaa
gaaagtccatcatccccaagcaaagctccacctgcacctcctcctcctcctccacctcca
ccaggagatgagaagaaggacgaagctcctgcagccaaagaagaagaggaagaagagaaa
gacctggagctcccctttaaaattttggggcggccggtaaagattcccagactgtccaaa
tatctcaaacttcccaaactccccaaagttcctgactggctccgacccatcgtggagtac
cgcttcccctccagcatcgacccgttcaccgacctgatctacgtcatctggctcttcatt
gttgtggcggcgtggaactggaacgtgtggttgattcccgtccgctgggcgtttccttac
caaacccccgaaaacatccatgtgtggctgctgatcgactacacctgcgacctcatctac
atcaccgacatcctcgtcttccagaccagactgcagtttgtccgtggaggagacatcgtg
tgtgacaaaaaagacatgagagaaaactacatgagcaccgagaggttcaagatggacgtc
atcagtttgttcccaatggaggttttctactacttcactggagtgaactctctgctgagg
tttcctcgtctgttcaagtacatggctttctttgagttcaacgacagaatggaagctgtg
atgaagaaagcgtacatctacagggtgatccgaacctccacctacctcctgtactctctg
cacatcaacgcctgtctcttctactggggctcagactatgaaggactgggatccaccaag
tgggtctacaacggaaagggcttcgcttacatccgctgttactactttgctgtgaagaca
ctgatcaccatcggaggactgccggaccccaccaccgtcttcgagatctgcttccagaac
atcaactacttcgttggtgtctttgctttctcgatcatgattggtcagatgagagatgtg
gtcggagctgcgacagccggtgagaactactaccgggcctgcatggacagcaccgtcaag
tacatgaactcctacaacatcccccgagaggtccagaaccggatcaagacctggtatgac
tacacctggaagagccaaggcatgctggacgagcaggagctgctcatacagcttcctgct
aagatgaggctggacattgccgtggacgtcaactacgccatcgtcagtaaagtcgccctg
ttccagggctgcgacaggcagatggtgttcgacatgctgaccaggctcaaatctgtcgtg
tacctgcccggagacttcgtctgcaagaagggtgagatcggcagagagatgtacatcatc
aaacagggggaggtccaggtggtgggcggtccggacctgcagacggtgtttgtcaccatc
agagccggctcggtgttcggggagatcagtttgctggcaggtggaggaggaaaccgacgt
acagctaacgtgaaggcgcacggcttcgctaacctcttcatcctggataagaaggacctg
gcagagatcctggtgcactacccggagtcccagaaactgctccgcaagaaggccaagacg
atgttgacgaaggacaagaagccggatgagaagggtggaggtaaagaggtggtggtcatc
ccagccagaccggacacccccaaaatgttcaaggcggctctgaaggtggcagagcaggcg
gggatcgaaggagccttcaccaaactgagggagagctacagaccgtcagacggtaccgag
gatgtggccccccctccctctccggctccgggtcacggcgccgacagctccatggtcatc
aggatgacatcacgagaggcgggagaggaggtgctgatcgtggaggagaagaagaagacg
gagtga
DBGET
integrated database retrieval system
