Larimichthys crocea (large yellow croaker): 104938292
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Entry
104938292 CDS
T04659
Symbol
atrx
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
104938292 (atrx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lco03000
]
104938292 (atrx)
03036 Chromosome and associated proteins [BR:
lco03036
]
104938292 (atrx)
Transcription factors [BR:
lco03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
104938292 (atrx)
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
104938292 (atrx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
104938292
NCBI-ProteinID:
XP_019121037
LinkDB
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Position
I:37285427..37314668
Genome browser
AA seq
2082 aa
AA seq
DB search
MSLPSSESNRDQMAEEPGSSTETMKPSSSRNKRKSTTVAKHTGLNESDASSESENDGATS
DNPSDNNTSKGTLVMRPAGNENKGAMKLRVDFKHKLTDDTLQKKVSCTACGKQVNQFQRN
SVYEHPVLKVLICKSCYKYYTSDDINRDSDGMDEQCRWCAEGGKLICCDYCNNAFCKKCI
LRNLGRKELSVITDENSKWHCYVCRSEPLQDLVSKCHSVMENQEHALLKQRKPDKMDKPD
KPDKTEERESKQHKNKPVKEHKAVVNGKEHVEGSGTMTFSYKKLQVPKELIKKTKKLVET
TTGLNNTFIQFIQQATDEQEDKSIRYRHLKAFKAVLADLKKAHSALEAALGPEFKNMEVQ
NGEEEQPIVRKSADVVVPVENDHMDNASDAVDESEATEEPVEEPALEVPSVEESALEVPS
TEEPALEEPAIEEEEADVEEADVEEADVEEADVEEADVDQDNEQDEENDQGSNDIEMKDQ
TEVGITKKKCKSEVCDDGLVSTGEMSLDHDIMSVPPSVPEELFQMVESLADSTMLSKTDT
DVVTGTEKDTENTKSNGNSTDSQRPQPKVKNLIVKLTPVPVVTTCGSRSSRTKNREKAEE
TQKKLKEEDHEEEEEGKEEEAKDDAADTVDGTNSPPPSRRSSRVKTTPLRKQTENKGKEE
SSDSESEEDGKEKAKSSKKSRNTKKEDGKQTTASEKKTMDSDSDEVPNILLEKAAAEQST
DEEQGSTGAKKRLFKLNNTSREDTDKMSKRKRKSESSDSDLENKSKRLSKKKKKRKGSDS
SNSDSDQEKEKKSKLGTAKRRSSRVKKTRQDEAKEDDRNSPEMKVAERKRSYEKKRRGRS
SKSASKLQLSSSEEEDEEQQQADSEEDSDAQKIKPIVEDNIVGGGVPFHQSSGDEVDDKK
VGLCEDDDDDDPENRIAKKMLLAQIKSNYSSGAESSTDNEGADKDEQSSKTIKKEEDDEE
AEEEQQDEDSEDSSSDVEVKKRGRRHKLLRHKLSLSEGESGDEKAASKEKKGGKKKSKVD
SNESEDSEDSDYEKADSSEESAVSEELSESENDGKRRKTRAAKKKDEEKQRSCKQKKKRR
RIKVQESSSSNEKSGEEDEDGEDRKGRKKIRKILKDDKLRTETRDALKEEEERRKRIAER
EALREKLREVIVVNESSQVTCPITTKLVLDEDEETKEPIVHVHRNLVTKLKPHQVDGVQF
MWDCCCESVKKIEKSSGSGCILAHCMGLGKTLQVVTFLHTLLLCEKLDFSTALVVCPLNT
VLNWLNEFEKWQHGMKDDESLQVTELATVKRPQERAYALQQWQEMGGVMIIGYEMYRNLT
QGRNIKSKKLKETFQKTLVDPGPDLVICDEGHILKNEASAVSKAMNSIRTRRRVVLTGTP
LQNNLVEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADSTFQDVRIMKKRAHILYEM
LAGCVQRKDYTALTKFLPPKHEYVLSVRVTPIQCKLYRYYLEHFTGVGNAMEGGRGRAGT
KLFQDFQMLSRIWTHPWCLQLDYISKENRGFFDEDSMDEFIASETEESSMSMTSEDDKKK
KKKQGKGKKKASDDSDSDDVEVIKEWNSSSRGRNGEGRNRPEPVEEPRPTSSAPGSPTPD
WHKEFVTEADAEILEHSGKITLLFEILRMAEEVDDKVLVFSQSLISLNLIEDFLELSCRA
KDEDKISPYKGDGKWYRNIDYYRLDGSTNATTRKKWAEEFNDTSNIRGRLFLISTRAGSL
GINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQLKTVYVYRFLAQGTMEEKIYDRQVTK
QSLSFRVVDQQQIERHFTTNELAELYTFEPDMADDPSEKKSKKATPLLPKDPFLAEMLQN
NKDQIACYHEHDSLLDHKEEEALSEEDRKAAWAEYEAEKKGLSMRTNYQATYAQMDMGSS
NYFSYNVAALASMTNQQLEDLINQGRQKVIEATNALKTLSRESLEDTIARVWKENPALTE
SQVQSMALGRQASVELEFKRREVVYRDVLTRQQTLMMFVQKLITNRKVQEQQMALANQAN
YLNQLAMQNGMMGGSGLSQRDLLGLYQQLHGLGKNPGPSKGL
NT seq
6249 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgccctcttctgaatcaaaccgagaccaaatggcagaggagcctggtagctca
acagaaactatgaagccctcctcttctcgcaacaagaggaagtccactactgtagctaag
cacactggactgaatgaatccgatgcctcatccgagagtgagaatgacggtgccacttca
gacaatccctcagataataacacatctaaaggcactttagtgatgaggccagctgggaat
gaaaacaaaggcgccatgaagctcagagtggatttcaaacacaaacttacagatgatact
ttacagaagaaggtgagctgcactgcctgtggaaaacaagtaaaccagtttcagcgcaac
tccgtgtatgagcatcctgtgctcaaagtacttatctgcaagtcgtgctacaagtattac
acaagtgatgacatcaacagggactctgatgggatggatgagcagtgcaggtggtgtgct
gaaggtggaaagctcatctgctgtgactactgcaacaacgccttctgcaagaagtgcatc
ctgcgcaacctgggcaggaaggagctgtcagtcatcacagatgagaactcaaagtggcac
tgctatgtctgcaggtcagagcctctccaggatctggtctccaaatgccacagcgtcatg
gaaaatcaagaacatgcgctactgaagcaaagaaaaccagataaaatggataaaccagat
aaaccagataaaacggaagaacgcgagagcaaacaacacaagaacaaaccagtcaaagag
cacaaagcagttgtcaatggaaaagaacacgtggaaggctcagggaccatgactttctcc
tacaaaaaactgcaggtacccaaagaactcataaagaaaactaaaaagcttgttgaaact
acgactggtttgaacaatacattcatccagttcatccagcaggcaacggacgagcaggaa
gataagtctatcagatatcggcatttgaaagccttcaaggccgtgcttgccgatttgaaa
aaagcccacagtgctttggaagcggctttggggcccgagttcaaaaacatggaggtgcaa
aacggtgaagaagaacagcctattgtgagaaagagcgctgatgtcgtagtccctgtagaa
aatgaccacatggataatgcatcggatgcagttgacgagtctgaggctacagaggaacct
gtagaggagccagctttagaggtgccatctgtagaggagtctgctttagaggtgccgtct
acagaggagcccgctttggaggagccagctatagaagaggaagaggcggacgtagaggag
gcggatgtagaggaggcggacgtagaggaggcggacgtagaggaggcggatgtggatcag
gataatgagcaggacgaggagaatgaccaagggtcaaatgacattgaaatgaaagaccaa
acagaagttggcataaccaaaaagaaatgtaaatctgaagtctgtgatgatgggctggtg
tcaactggtgaaatgtccctagatcacgacattatgtctgtgcctccttcagttcctgaa
gagctttttcagatggtggagagtctcgcagattccaccatgctctcaaagactgacaca
gatgtagtcacaggcactgaaaaagacactgaaaatacaaagtctaatggaaactcaaca
gactctcaacgtcctcagcccaaggtgaaaaacctcatagtcaaacttactcctgtgcca
gtggtgacgacatgtggctcgaggtcctccaggaccaaaaaccgagagaaagccgaagag
acgcagaaaaagttaaaagaagaagaccatgaggaggaggaggagggaaaagaagaggag
gcgaaagatgatgctgctgatacagtagatgggacaaacagcccaccacccagccgtcgc
tctagtagagtgaagaccactcccttgaggaagcagactgagaataagggcaaggaagag
tcctccgattcagagtcagaggaagacggtaaggagaaggccaaatcttccaagaaatcc
agaaacaccaaaaaagaggatgggaagcagaccacggcttctgagaaaaagacgatggat
tctgactcggatgaagttcctaacatactgctagagaaagctgcagcagagcagagcaca
gatgaggaacagggaagcacgggtgctaaaaagcggctattcaaactaaacaacacatcc
agagaggatacagacaaaatgtccaaacgcaaaaggaagtctgaaagctctgattcagac
ttggagaacaaaagtaaaaggctttccaagaagaagaagaagaggaaaggctcagactcc
tccaactcagactctgaccaggagaaggagaaaaagagtaaattaggcactgcaaagagg
cgatctagccgtgtgaagaagacgaggcaagacgaagcgaaagaggacgacagaaactca
cctgagatgaaggtggccgagcggaagaggtcttatgaaaagaagcgcaggggaaggagc
tccaaatccgcctccaagctgcagttgtcctccagcgaggaggaggatgaggagcagcag
caggctgactccgaagaggacagcgacgcacagaagatcaaacccattgtggaagataac
atagtgggaggtggtgtacctttccatcagtcctcaggagatgaggtggatgataaaaaa
gtcgggctttgtgaagatgatgacgatgatgatcctgaaaacaggattgcaaagaaaatg
cttcttgcccaaataaaatcaaactactcttctggagccgagagctccaccgataatgaa
ggagcagataaggacgaacagtcttccaagacgattaaaaaagaggaggacgatgaggaa
gcagaagaagagcagcaagatgaggattcagaagactcaagttctgatgtcgaagtgaag
aaacgtggcagacgccacaaattgctacgccataaactctcgctgagtgagggcgaatca
ggagacgagaaagctgctagtaaagagaagaaggggggcaagaagaagtcgaaagtagac
agcaatgaatctgaagactctgaagactctgactatgagaaggcagattccagtgaagag
tctgcagtaagcgaggagcttagtgaatccgagaacgacgggaagcgtcgaaagaccaga
gctgcgaagaagaaggacgaggagaaacagagaagttgcaagcagaagaagaaacgacgc
aggattaaagttcaggagtcttcgtccagcaatgagaagagcggagaggaagatgaagat
ggagaagaccgcaaaggacgcaaaaagatccgcaaaatcctgaaggacgacaagctgcgg
acagagacgagagatgctctgaaagaagaggaggagaggaggaaacgtatagcggagaga
gaagcactcagggagaaacttcgagaggtgattgtggtgaatgagtcttctcaggtgacc
tgtccaatcacgaccaagctggtgctggatgaagatgaagagaccaaggagccgatagtg
cacgtgcacaggaaccttgtcacaaagctcaaacctcaccaggttgacggggtgcagttc
atgtgggactgctgctgtgaatctgtgaagaagatcgagaagtcttctggctctggctgc
atcctcgcccactgtatgggcctgggaaaaactttgcaggtggtgacattccttcacact
ttgctgctttgtgagaagctggatttcagcacagctctggtggtttgtcccctgaacacc
gtccttaattggctcaatgagtttgagaagtggcaacacggaatgaaggatgacgagagt
ttacaggtgactgagctggccacagtaaagaggccacaggagcgagcatacgccctccaa
caatggcaagaaatgggtggtgttatgatcattggttacgagatgtaccgaaacctgacg
cagggcaggaacatcaagagcaagaagctcaaagagacctttcagaagacactggtagat
ccaggtccagacttggtgatctgtgatgaaggtcacattctgaagaacgaggcatctgct
gtgtcaaaagcgatgaactctatcaggacgaggaggagggttgtgctgactggaacacct
ctgcaaaacaaccttgttgaataccactgcatggtgaacttcatcaaggaaaacctgctg
ggttcaataaaagagttcaggaaccgcttcatcaaccctatccagaacggccagtgtgct
gactccacatttcaggatgtccggatcatgaagaagagggcacacatcctctatgagatg
cttgctggttgtgtccagaggaaagattacacagcgctcactaagttcctgcctcccaaa
cacgagtatgtgttgtcagtcagagtgactccgatccagtgtaaactctacagatactac
ctggagcacttcacaggtgtggggaatgctatggaggggggccggggccgtgcggggacc
aaactcttccaggatttccagatgctcagcagaatctggacccatccctggtgccttcag
ctggactacatcagtaaagaaaacaggggtttcttcgacgaggacagcatggacgagttc
atcgcttcagaaacagaagaatcctctatgagcatgacctccgaggacgacaagaagaag
aaaaagaagcaagggaagggaaaaaagaaggcatctgatgactcggacagtgatgacgtg
gaggtcatcaaagagtggaacagcagctctcggggcaggaacggagagggtcgaaacaga
ccggagcctgtagaggaacctcgaccaactagctctgcaccaggaagtccaactcctgac
tggcacaaggagtttgtcacagaggccgacgctgagatcttggagcactcaggaaagata
acgctcctctttgagatcctgcgcatggcagaggaagtagatgataaagtgttggtgttc
agtcagtctctcatctctctcaacctgatcgaggatttcctggagctgtcttgcagagct
aaagatgaagacaaaatctctccatacaaaggtgacggcaagtggtacaggaacattgac
tactatcgcctggacggctccaccaacgccaccaccaggaagaagtgggctgaagagttt
aatgacaccagtaacattagaggtcgtctattcctcatttcaacgcgagccggctccctt
ggcatcaacctggtggcagccaacagagtcatcatcttcgacgcctcctggaacccctcc
tatgacatccagagtatcttcagggtttaccgttttggccagcttaagacggtctatgtg
tacaggttcctggcccaaggtacaatggaggagaagatttacgaccggcaggtaaccaaa
cagtctctgtcattccgtgtggtggaccagcagcagattgagcggcactttacaacgaac
gagctggccgagctctacacctttgagccggacatggcggacgatccctcagagaagaag
agcaagaaagccacacccttgctcccgaaggatcccttcctggctgagatgctgcagaac
aataaggaccagatcgcgtgttaccatgaacacgactccttgctggaccacaaggaggag
gaagccctgagcgaggaggatcgcaaggccgcctgggccgaatatgaagcggagaaaaag
ggtctgtccatgaggaccaactaccaggcaacatacgcccagatggatatgggctcctcc
aactacttctcctacaatgtggcggctttggcctccatgaccaaccagcagctggaggac
cttatcaatcaggggcgacagaaagtcattgaagcaacaaatgcattgaagactttatca
cgggagtcactggaagatacaatcgccagagtgtggaaggaaaacccagcactcacggag
agtcaggtccagtcgatggctctgggtcgacaggccagtgtagagctggagttcaagcgc
agggaagtcgtgtacagggacgtcctcacaaggcaacaaacgctgatgatgttcgtgcag
aagctgatcactaacaggaaggtgcaggagcagcagatggccttggctaaccaggccaac
tacctgaaccagctggccatgcagaacggcatgatgggaggcagcgggctcagccagagg
gacctgctggggctttaccagcagctccacggcctgggcaagaatcccgggccctccaag
ggcctgtag
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integrated database retrieval system
