Larimichthys crocea (large yellow croaker): 104938314
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Entry
104938314 CDS
T04659
Symbol
gdf5
Name
(RefSeq) growth/differentiation factor 5
KO
K04664
growth differentiation factor 5
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04060
Cytokine-cytokine receptor interaction
lco04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
104938314 (gdf5)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
104938314 (gdf5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
lco04052
]
104938314 (gdf5)
Cytokines and neuropeptides [BR:
lco04052
]
Cytokines
Transforming growth factors (RSTK binding)
104938314 (gdf5)
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Gene cluster
GFIT
Motif
Pfam:
TGF_beta
Motif
Other DBs
NCBI-GeneID:
104938314
NCBI-ProteinID:
XP_010752991
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Position
VI:26723092..26729720
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AA seq
593 aa
AA seq
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MKVAKRLSLLLSCWTLIYLHPVLGSLSRTRPSTPQNQHQQQQQRLGEAAERGGDGEQAHR
RGGGAGIGGATTAVRQPVTGAWKPSPVSPARITRIRAGPPLIKGETTVIKSKAPVSRAQL
RDRAVSFGRKEAVRSWLPAGDVHVKAHAPAGFSAHAAGKGIGTAAVSGGRGGSPGTHVGK
AAPARAGTPQRGAGAQRQQQSAAPVAQRGATSSKAGRVSDKQPLVIPHDYMLSLYWSLST
GDMNSSALHEAGLANTITSFVDKGQDERGPQLRRQRYHFNVSSLERDGLLGAELRILRKR
LSDPRRASVGSTADGGGGGSSPCLKLYTCASGKQQAALLQTKAVEDLLGGGGFSSKWEVF
DVWKVFKGFKAQQNQQTQQNQQLCFELEGLEHRGGRPMDLRTLGLARPGRTNKEKAFFLA
FGKSKKRDLFYNEIKARSGHDNKTVYEYLFTQRRMRRAPAARGAKKPLQQPPPPPQSLPQ
HQVVKTQARPRCHRRRLHVNFKEMGWDDWIIAPLEYEAFHCDGVCDFPIRSHLEPTNHAI
IQTLMNSMDPESTPPTCCVPTRLSPISILYIDSANNVVYKQYEDMVVESCGCR
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttgcgaagcgtctttctctcctgctcagctgctggactctcatttacctgcat
cccgtcctcggctcgctgagccggaccagaccgagcaccccgcagaaccagcaccagcag
cagcagcagcggcttggagaggcagcggagcgcggcggggacggagagcaggctcaccgg
cgcggcggcggtgcagggatcggtggagcgacaaccgcggtgaggcagccggtgaccggg
gcgtggaagccgtcaccggtgagtccggccaggattacgcggatccgcgcgggcccgccg
ttaatcaaaggcgagacgaccgttattaaaagcaaagctccggtgagccgcgcgcagctc
cgggacagagcggtcagcttcgggcgcaaagaggccgtgcgctcgtggctgcccgccggg
gatgttcacgtcaaggcgcacgctcccgcgggttttagcgcgcatgcagcggggaaagga
atcgggaccgcggctgtctccggtggaagaggcggatcaccggggacacatgtggggaaa
gctgctccagcgcgcgcggggactccacagagaggcgccggtgcgcaaaggcagcagcag
agcgcggctccggtggcgcagcggggagcaacaagcagcaaggccgggagagtgagcgac
aagcagccgctggtcatccctcatgactacatgctgtccctctactggtctctgtccacc
ggggacatgaacagcagcgcgctgcacgaggcgggtctggccaacaccatcaccagcttc
gtggataaaggacaagacgagcgcggtccccagctgaggcggcagaggtatcacttcaac
gtcagctccctggaacgagacgggctcctgggggccgagctgcgcatcctgaggaagcgc
ctgtctgacccccgaagagcctcagtgggatccacagctgatggaggaggaggaggttca
tccccgtgcctgaagctgtacacctgcgcgtcaggtaaacaacaagcggctctgctccag
acgaaggccgtggaggatctgctcggtggaggcggattcagcagtaaatgggaagtgttt
gacgtttggaaagtgttcaagggcttcaaagcccagcagaaccagcagacccagcagaac
cagcagctgtgctttgagctcgagggtctggagcacagaggcggtcgccccatggacctg
cgcacactcgggttggcccgacccggcaggaccaacaaggaaaaggctttcttcctggcg
tttggcaaaagcaagaagcgcgaccttttctacaacgagatcaaggcgcggtcaggccat
gacaacaagaccgtctatgaatacctgttcacccagcgccgcatgcggcgagctcctgct
gcaaggggcgctaaaaaacctctgcagcagccgccgccgccgccgcagtccctcccccaa
catcaagtggtgaagacgcaggcgaggccgcggtgccaccggagacgactccacgtgaac
ttcaaggagatgggctgggacgactggatcatcgcgccactggagtacgaggcctttcac
tgcgacggcgtctgcgacttccccatccgctcgcacctcgagccgaccaaccacgccatc
atacagaccctgatgaactccatggacccggagtcaacgccgccgacctgctgcgtcccg
acgcgactcagtccgatcagcatactctacatcgactcggccaacaacgtcgtctacaag
cagtacgaggacatggtggtggagtcatgcggttgcaggtag
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