Larimichthys crocea (large yellow croaker): 104938504
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Entry
104938504 CDS
T04659
Name
(RefSeq) arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3 isoform X1
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104938504
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104938504
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lco04147
]
104938504
Membrane trafficking [BR:
lco04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
104938504
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
104938504
Exosome [BR:
lco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104938504
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
PH
Ank_2
Ank
Ank_4
PH_21
Ank_5
PH_11
PH_8
TPR_TTI1_N
DASH_Spc19
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
104938504
NCBI-ProteinID:
XP_027134779
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Position
VI:1020495..1071040
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AA seq
855 aa
AA seq
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MTVDFEECIKDSPRFRAGIDDVETDVVEIEAKLDKLVKLCSGMIEAGRAYVSANKLFVNG
IKDLSQQCKKEEVISECLEKCGERLQEIVNYHMILFDQAQRSIKQQLHIFIKEDVRKFKD
TKKQFDRVREDMELAQVKNAQAPRNKVHEAEEATQALILSRKAFRHLALDYVLQINVLQA
KKKFEILDAMLSFMRAQYTLFQQGFNILDEIDPYMKKLAAQLDQLVIDSAMEKRELEHKH
ALIQQRTLMQDFSYDDPKLEFNVDAPNGVVMEGYLFKRASNAFKTWNRRWFSIQNSQLVY
QKKLKDSLTVVVEDLRLCSVKPCEDNERRFCFEVVSPTKSCMLQAESEKLRQAWIQAVQA
SIASAYKDITDNYYIERLDRTASPSTSSIDSASEPRERGERAERGVRGGGESLLQRVQSL
PGNELCCDCGQTAPCWASINLGVLLCIECSGIHRSLGVHCSKVRSLTLDSWEPELLKLMC
ELGNTVINQIYEGACEELGAKKPGPSSSRQEKEAWIKSKYVEKRFLKKMSGSEALVEGER
KSRPWTVKKCQRHNSSVRAPNKVRRKYHRYEPGSASPANLSAAAAAKFRRDSLFCPDELD
SLFSYFDTGSGPRSPAGLSSDSGLGGSTDGSTDILLFGSVVDSVTEEDEESEESSSGEVE
IEQEVSSDPEDPRELHPGALLHRASRLHNLPLMAEALAHGADVHAASEEEEGKTPLIQTV
IGGSLIACEFLLQNGADVNQRDMRGRGPLHHATYLGHTGQVCLFLKRGASQTEVDEQGHD
PLSIAVQAANADIVTLLRLARMNEEMREAEAPLGQPGVATGSRRVKPKDVRDRMTSPVLM
SFASFLSSRLSSPRS
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgacggtggactttgaagaatgtataaaagattcaccccgattcagggctggcattgat
gatgtggagacagatgtggtggagattgaggcaaaactcgacaaactggtgaagctatgc
agtgggatgatcgaggccggcagggcctacgtcagcgccaacaagctctttgttaatggc
atcaaggacctgtcgcagcagtgcaagaaagaggaggtgatatcggaatgccttgaaaag
tgtggagaacgcctccaggagatcgtcaactaccacatgattttgtttgaccaggcccag
aggtcgatcaagcagcagcttcacatcttcattaaagaggatgtacgcaagttcaaggac
accaaaaagcagtttgaccgtgtgcgtgaggacatggagctggcccaggtgaagaacgcc
caggcacccaggaacaaggtgcatgaggctgaagaggccacgcaggctctcatcctcagc
cgcaaagccttcaggcatctggccctagactatgtactacagattaacgtgcttcaggcc
aagaagaagtttgaaatcctggatgcaatgctgtccttcatgcgtgcccagtatactctc
ttccaacaaggctttaacatcctggacgagattgacccatatatgaaaaaactggctgca
cagctggatcagctggtcatcgactcagccatggagaagagggagctggagcacaaacac
gccctcatccagcagagaactctcatgcaggacttttcatatgatgaccccaagttggaa
tttaatgtggatgcaccaaatggcgtggtcatggagggctacctcttcaagagggccagc
aatgcattcaagacctggaacaggcgctggttctccatacagaacagccagctggtctac
caaaagaaacttaaggactctttgacagtggttgtagaggacctgagattgtgttctgtc
aaaccatgtgaagataatgagagaaggttctgctttgaggtcgtttcacccaccaagagc
tgtatgctacaggctgagtccgagaagctgcgacaggcttggatccaggcagtccaggcg
agcatcgcctctgcttacaaagacatcactgacaattattacattgagcgtttggaccgg
acagcctcaccttccaccagcagcatcgactctgccagcgagcccagggagaggggagag
agggctgagaggggagtcaggggaggtggggaaagcctcctccaaagggtgcagagcctg
ccaggcaacgagctgtgctgcgattgcggtcaaacggctccctgctgggcttccatcaac
ctgggagtgctgctctgcatcgagtgttcagggatccacaggagtttaggcgtccattgc
tcaaaagtgcgctcactcacattagactcatgggagccagaattactcaagctgatgtgt
gaattggggaacactgtgatcaatcaaatttatgagggagcctgcgaggagctgggagca
aaaaaacctggaccgtccagttcaagacaggagaaagaagcctggatcaagtccaaatat
gtggagaaacgcttcttgaagaagatgagtggcagcgaggcactggtggagggtgaaaga
aagtcccggccctggactgtgaagaagtgccaacggcacaacagctctgttcgtgcccca
aacaaggtccgcaggaaataccatcgctatgagccaggcagcgcttcacctgcaaatctt
tcagcagcagctgcagcaaagtttcgccgtgactccctgttctgtccagatgagctggat
tcactattttcctactttgacactggctctggccctcgcagccccgcaggtcttagcagc
gacagcggcctgggaggaagtactgatggcagcacagacatcctgctttttggctcagtg
gtggacagcgtcacagaagaagacgaggaatcagaggagtcctccagtggtgaggtggag
atcgaacaagaagtgtcttcagaccctgaagacccgagggagctccacccaggggcgctc
ctgcaccgagcctcacgtctacacaacctgccccttatggcagaggcattggcacatggt
gctgacgtacacgctgcaagtgaggaggaagaggggaaaacgccgctcattcagactgtg
atcgggggctctctgatagcttgtgagttcctgctacagaacggagctgatgtgaaccag
agggacatgagaggcagaggcccgctgcaccacgcaacctatctgggacacactggtcag
gtgtgtctattcctgaagagaggagcgtcacagacggaggtggatgagcagggtcatgac
cccctaagtatcgccgtccaggctgccaacgcagacatcgtcaccctattgcgtttagcg
cggatgaatgaggagatgcgagaagcggaggctcccttgggtcaaccaggggttgccacg
ggcagcaggagagttaaacccaaggatgttcgggatagaatgacatctcctgtgctgatg
tctttcgcgagttttctctcctcgcgtctctcgagcccgagaagttga
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