Larimichthys crocea (large yellow croaker): 104938539
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Entry
104938539 CDS
T04659
Symbol
chaf1b
Name
(RefSeq) chromatin assembly factor 1 subunit B
KO
K10751
chromatin assembly factor 1 subunit B
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lco03036
]
104938539 (chaf1b)
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
104938539 (chaf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
ANAPC4_WD40
EIF3I
WDR55
CAF-1_p60_C
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
B-prop_COPA_B_2nd
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_HPS5
eIF2A
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
104938539
NCBI-ProteinID:
XP_019118665
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Position
XVIII:16743259..16750986
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AA seq
619 aa
AA seq
DB search
MKLVTCEIAWHNKEPVYSLDLQHSSDGRVHRLATAGVDTTVRLWRVDTGPDGKAVVEFLS
NLARHTKAVNVVRFSPNGELLASGGDDAAILLWKLNDSKEPEQPPMFQEDEDAQLNKESW
SVVKTLRGHIEDVYDVCWTRDGNFMVSGSVDNTAVMWDINKGQKLCILNDHKSYVQGVTW
DPLGQYVATLSCDRVMRVYSTHTKKKAFCVSKMSSGPLAEGEAKQYRMFHDDSMRSFFRR
LSFTPDGSFLLAPAGCVEIGENIINTTYIFSRKSLKRPIAHLPCPSKATLAVRCCPVYFE
LRTKKGEDGSIQTLPNVFQLPYRMVFAVASEDSIFLYDTQQTLPFGLVSNVHYHTLSDLT
WSRDGSFLAVSSTDGYCSFLSFSPGELGTPLKEPPTLEIFTPNTGVEKRGKKSSKTSSPV
TQPPNSAPTPASQTGTGKDAPPSVTPSEEKKSVPSAKSKPQSRRITLNTLEGWGKPSTPK
AAAPSAPQTTASTSTSAPSTPQLRLTPLKASATQPRIAPLTPSTPKVLNSANTPGPTTPK
GATTPNGTTTPKGPTPRRVSLTPVASRSPAVGSLFRTPSSTEKAKHERPSPPSDPVCQPP
ESKRPKTSEGKAKTSATQT
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgaagctggtgacctgtgagatcgcatggcacaacaaggagccggtctacagcctggac
ctccagcacagctccgatggacgcgtccaccggctggccacagctggagtggacaccacg
gtccgactgtggcgggttgacacgggcccagacgggaaggcggtggtggagtttctgtct
aacctggcgagacataccaaggcagtcaatgtggtgcgctttagcccgaatggagagctg
cttgcttcaggaggagatgatgcagcgattctgctgtggaagctcaatgactcgaaggag
ccggagcagccgcccatgttccaggaggatgaagacgctcagctcaacaaggagagctgg
tctgtggtcaagacactgaggggacacatagaggatgtgtatgacgtctgctggacacgg
gatggaaatttcatggtgtccgggtccgtcgacaacaccgcagtcatgtgggacataaac
aaaggacagaagctgtgtatcttgaatgaccataagagctacgtgcagggggtgacctgg
gatcctctggggcaatatgtagccactctcagctgcgacagagttatgcgtgtgtacagt
acccacaccaagaagaaggctttctgtgtcagtaaaatgagctctgggccgcttgcagag
ggagaggccaagcaatacagaatgttccacgacgacagtatgaggtcatttttccggcgt
ctttctttcacaccggacgggtctttcctgctcgccccagctggatgcgtggagattgga
gaaaacatcataaacaccacgtacatcttttccaggaagagcctcaagaggcccatcgct
cacttaccgtgtccatccaaagctacactggccgtgcgctgctgcccagtctactttgaa
ctgaggaccaagaaaggagaagacggttctattcagactcttcccaacgtattccagttg
ccgtaccgcatggtgttcgccgtggcgtctgaggactccatcttcctgtacgacacgcag
cagacgcttcctttcggcctggtttccaatgtccactaccacacgctcagcgacctcaca
tggtctcgtgacggttccttcctggctgtgtcctccacagacggctactgctccttcctg
tctttctctccgggggagctgggcactcctctgaaggagccccccaccctggagattttc
actccaaacactggtgttgagaaaaggggcaagaaatcgtctaagacctcatctcccgtg
acccagcctccaaactcagccccgactcctgcatcccaaaccggcaccggcaaagacgcc
cccccctccgtgaccccctcagaagagaagaagagcgtccccagtgccaagtccaagcct
cagtctcgcaggatcaccctcaacaccttggagggatgggggaagccctccacacctaaa
gccgcggctccctcagcacctcagaccacagcgtccacgagcactagtgcgccctctact
ccccaactgcgtctcacccccctcaaagcctccgcaacgcagccacgcatcgctcccctc
actccctccacccctaaagtcctcaacagtgctaacactcctgggcccacaacccccaaa
ggtgcaaccacaccaaacggtacaaccacaccaaaggggcccaccccgaggagagtatct
ctgactcccgttgcatcccgatctccagctgttggttcactcttccgcactccctcctcc
accgagaaggccaaacatgagcgtccttctcctcccagcgatccagtgtgccagcctcca
gagtccaaacgacccaagaccagcgagggcaaagcaaagaccagtgccacccagacttaa
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