Larimichthys crocea (large yellow croaker): 104938605
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Entry
104938605 CDS
T04659
Name
(RefSeq) E3 ubiquitin-protein ligase RNF180 isoform X1
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lco04121
]
104938605
Enzymes [BR:
lco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104938605
Ubiquitin system [BR:
lco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104938605
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF180_C
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
RING_XB3-XBAT31
Yippee-Mis18
E3_UbLigase_R4
NuBaID_C
zf-C3HC4_4
Rtf2
Motif
Other DBs
NCBI-GeneID:
104938605
NCBI-ProteinID:
XP_010753321
UniProt:
A0A0F8CAT2
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Position
IV:complement(5148802..5154118)
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AA seq
536 aa
AA seq
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MSESPKRGRTMLRCRRCRKGIIDSTCLSTVEATDESSAAVCSIWHVNVDTLPEWILTSVH
QAQWTVGKLNCQNCAARLGGFNFINRSVCPCGRDATVHLSKSRVDRDHKHYVLIVQPRRT
RPRKEQAGLLTDGFQNKEQRPESNRTALDTLQLNCAAIMSHSSHAEASSSLTNSENTPSF
SFSPLYCISHRRRCSLEDDATIRSSCFCPAGHTNKPAIEVTRAETDESMRSPVSHPTRQR
FDTDSDTSVNAFACHSLVSGRTRSPLRHYPPQTVEDVESSPETTAVHEEVSDSALFLRGR
SISDSVAEDQEVLPETFTASLASNRLSKREKNRLKGLRRKQRRRERWLHSQQDKGQAESV
SGSLLDSEEEDREGLTCAVCLDVYFSPYSCQPCGHVFCEPCLRTIGKNRPTNAPCPLCRT
LISHTDFHNELNQTAKTFFPKVYYTRKQNFQRAPCAKWPLPSCRKRFHTFWGDQRQAAMA
GRRWHFGRGGFTLDAFGLTDMRGWLFDIGLVIVYIHSVNWILALLLLCFLMYYFFF
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagagcccgaagagagggagaaccatgctccgctgcaggaggtgtcggaaaggc
atcatagactcgacgtgtttgtccacggtcgaggccacagatgagagttcagctgcagtt
tgcagtatctggcacgtgaatgttgacacgttgccagagtggatactgacatcagttcac
caggcccagtggactgttgggaaactaaactgccagaactgcgccgctcgtttaggcggc
ttcaacttcattaaccgcagcgtgtgtccctgtggccgggacgcaaccgtccacctcagc
aaaagccgcgtggatcgtgaccacaaacactacgttctcatcgtccagccgaggaggacg
aggcccaggaaggaacaggccggtctgctgacagatggctttcagaacaaagagcagagg
cctgaatctaaccggaccgcactggacaccttacagctcaactgtgctgctatcatgtcc
cacagcagccacgccgaggcctccagttcactaactaacagtgaaaacaccccgtctttc
tctttcagccctctgtactgcatctctcacagaagacggtgcagcttggaagatgacgcc
accatcaggtcgtcttgtttttgccctgcaggccacacgaacaagcctgccatcgaggtc
acgagggcggagacagacgagtctatgcggtcgcctgtgtcgcatcccacgagacagcgc
tttgacactgacagtgacacctctgttaacgctttcgcctgccattcacttgtttccgga
aggacacggtcacctctgcgtcactatccgccgcaaacagtggaggacgtggagtcttct
ccagagaccacggctgtccacgaggaggtttctgattcagccctgttcctcagagggaga
tccatctctgacagtgtggccgaggaccaggaagtgctgcctgaaaccttcacagcctcc
ctggcctcaaacagactaagcaaaagagagaagaaccgtctgaagggtcttcggaggaaa
cagagaaggagagagcgatggctgcacagtcagcaggacaaggggcaggctgagagtgtg
agcgggtcactgttggacagcgaggaagaggacagagaaggcctcacctgcgccgtgtgt
ctcgacgtctacttcagcccgtacagttgtcagccctgcggccacgtcttctgcgagccg
tgtctgcgcacaattggcaagaaccggccgacaaacgcgccctgccccctctgccgcacc
ctcatctcacacacagacttccacaatgagctcaaccaaacggccaagaccttcttcccc
aaagtgtactacacccgcaagcagaacttccagagggctccatgtgcaaaatggcctctg
cccagctgtcgcaaacgcttccacactttctggggagaccagagacaggcggcgatggca
gggagacgttggcactttggccgtggaggttttacactggatgcttttggcctcactgac
atgcgcggctggctctttgacatcggcctggtcatcgtctacatccactcggtcaactgg
atcctggctttgctgctcctctgtttcctcatgtactacttcttcttttaa
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