Larimichthys crocea (large yellow croaker): 104938607
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Entry
104938607 CDS
T04659
Name
(RefSeq) zinc finger FYVE domain-containing protein 16 isoform X1
KO
K04679
MAD, mothers against decapentaplegic interacting protein
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04144
Endocytosis
lco04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
104938607
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104938607
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lco01009
]
104938607
Protein phosphatases and associated proteins [BR:
lco01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104938607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SARA_C
SARA
FYVE
Motif
Other DBs
NCBI-GeneID:
104938607
NCBI-ProteinID:
XP_019134193
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Position
IX:514118..539781
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AA seq
1413 aa
AA seq
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MDSFFKAAVCDLDKLLDDFELNTEELECKSVFLKPPVFPFSSLGSQCLSSEASTVPPNLP
DLNSLHYGSATSCPDRSGAHNRSGGGGADDREVKGQPLTAVDLLSSVDRRPAQSSAPPCP
DRALKPVCDLVNDTSSAILVRANSHDAFSELDMVEKQMEEMEEEEQEEELLVDFNSPVVS
VHREEQDQSNAEEEQASAGKDELLSLNPHEPSGEYSASLSLLDVILPAAVERGCESTDDS
LSPRPEEEKDCEEAACTNQAVVNSSDHCEAQSAAPPDSVKDTTTTSVNDEEESQEASDKG
EEEPPAGETGETGEAPAGPQSGECVSLSCLPLAVSMCGALVNSNTAEEESGQADEVCEST
EADAMSALEAREDASHSEEPVDSSAEGRASPEGQRLPSADAASCDRPEPSPVDPPEFGFE
YLPESDQAELLVTDEELDAFLREHTEAEQGGGISGDFTQPESLSEPNGGLEEEPRSCGRE
DLESLASPESDRTMCVSAEASSNPGAPSSLLQDSHQEEPELSSGVSHSLTSNTFQSQHSS
SPDQQPSYGGARPKQLHCQTARSPPAGEEGEEQQTLAKESSQAEDGESSPTSPSPSEEHS
NIRDLSPMYASQEPQEYSVGYDELSEPPPYPGEPATDGARPVNWKREGGEELGSRQPAWV
PDSEAPNCMNCYQRFTFTKRRHHCRACGKVYCAVCCNRKCKLKYLEKEARVCVVCFDTIH
RAQALERMMSPAGPSPNPNVPSEYCSTIPPLQQARAAGTLNSPPPTVMVPVSVLKHPNND
SCPREQKRVWFADGILPNGEVADTTKLSVTSRRSSQEFSGVATDQTTPGSAGSEVGVGGS
SSSSSSSPEASGAVEVVRLPLSGPWDYALLSGIGSSVKRVPSLLPDNEDELPPLLITTGE
DEAGDVLVEESPAPCQILHLLEEGGPRPLTFVLNANLLVNVKLVTYCSRQCWCFGSNGLQ
ALGQRELVFLLECLPEEKALPKDLFTLYLNIYQEAQKGKFLEELDNVTFTSSFLGSKDHA
GMLFFSPTCQPLDGLTLPPQPFLFGLLIQKFEVPWAKVFPLRLLLRLGAEYSVYPTPVTS
VRFRESVYRETGHTIMNLLADLRNYQYSLSVVEGLRIHMEMGHSYIDIPKGSFNEMQKVV
NASNEHVISIGARFSSEADSHLVCFQNEDGNYQTQANSMPGKTRTVTGASFVVFNGALKA
SSGFIAKSSIVEDGLMVQIPPETMESLRTALREQTDFHIPCGRNDGAEVRENVTVRWVDW
SSPVNTGKTSGVDGRPLDGVRSVRVLQDTEFESDGRTIKCTEVFYQLKNPDCSLASVLSS
CSVFQKEMALATCGALTPHLTVLTSSGINSLSLRISTQADMVEYQAGCGGRLLPQRYMNE
LDSALIPVIHGGGASVPQTAMDMEFIFYITHTI
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atggacagcttcttcaaggcagctgtgtgtgacctggacaaactgctcgacgacttcgag
ctcaatactgaggagctggagtgtaagtctgttttcctgaagccgcccgtgttccccttc
tcctctctgggctctcagtgtttgtcgtcagaggcgtccaccgtcccgccgaacctcccc
gacctcaactccctccattatggctccgccaccagctgccccgaccgctccggtgctcat
aaccgcagcggcggcggtggtgcagacgacagagaggtcaaaggtcagcctctcaccgcc
gtggacctcctctcctctgtggatcggcggccggctcagagctccgcccctccctgcccg
gaccgagcgctgaagccggtgtgcgacctcgtgaacgacacgagctcggccatcctggtc
agggccaacagccacgatgctttcagcgagctggacatggtggagaagcagatggaggag
atggaggaagaggagcaggaggaggagctgctggtggactttaacagccctgtggtcagt
gtccacagagaggagcaagaccagagcaacgccgaggaggagcaagcctccgcggggaag
gacgagctgctgagtttaaacccccacgagccgagcggcgagtactcggcctcgctgagt
ctgctggacgtcattcttcccgccgcggtggagcgaggctgcgagtcgacggatgattcg
ctgtcaccgaggcctgaagaggagaaagactgcgaggaggcggcgtgcacaaaccaagca
gtggttaactcctcagaccactgtgaagcgcagagcgctgcgcctcctgatagcgttaaa
gacacgacaacaacctcagtgaacgacgaggaggagtcacaagaagcctcggataaaggc
gaggaagagcctcctgctggtgagacaggtgagacaggtgaggctcctgcaggtccgcag
tctggggaatgtgttagcctatcatgcctgcccttagctgtgtccatgtgtggagctctg
gtgaattcaaacaccgcagaagaagagtcgggacaagctgatgaggtctgtgagagcacc
gaggccgacgccatgtcggccctggaagcccgagaggacgcgtcccattcagaggagcct
gtcgactcgtccgcagagggcagggcgtcaccggaggggcagcgcctcccctctgcagat
gctgcctcatgtgatcgcccagagcccagcccggtggatcctccagagttcggcttcgaa
tacctgccagagagcgaccaggccgagctgctggtcacggacgaggagctggatgcgttc
ctgcgggagcacaccgaagctgagcagggcggaggcatctccggagatttcacccaaccg
gagagtctctccgaaccaaacggaggtttggaagaggagccgaggagctgtggacgggag
gatctcgaaagtctggcctctccggaaagcgacagaacgatgtgcgtgtccgcagaggca
agttcgaaccccggtgctccgtcatcactgctgcaggactctcaccaagaagagcccgag
ctctcctctggagtaagccattctttgaccagcaacactttccagtcccagcacagcagt
agccccgatcagcagccctcctatggaggcgcacggcctaaacagctacactgccaaact
gcgagatctccaccagcaggagaagaaggcgaggagcaacagacgctcgcgaaagagtcg
agccaagcagaggacggagagagttcacccacgagccccagcccttcagaggagcattcc
aacatcagggacctgagccctatgtacgcctctcaggagcctcaggagtacagcgtgggg
tacgatgaactctctgagcctccgccttaccccggcgagccagcaaccgacggcgccagg
cccgttaactggaagagggaaggaggcgaggagctggggagccgacagccggcctgggtg
cccgactctgaagctcccaactgcatgaactgctaccagaggttcacgttcaccaagagg
cggcatcactgtcgagcctgcggaaaggtttactgcgccgtgtgctgcaacaggaagtgt
aagctgaagtatctggagaaggaggctcgcgtctgtgtcgtctgcttcgacacgatccac
agagctcaggccctggagcggatgatgagtcctgcgggtcccagtccgaaccccaacgtg
ccatctgagtactgcagcaccatcccccctttgcagcaggctcgtgccgccggcactctt
aactctcctccaccgaccgtcatggtgcctgtgtccgttctcaaacacccaaacaacgac
agttgccctcgcgagcagaagcgcgtgtggttcgccgacggcatcttgcccaacggagag
gtggcggacacgaccaagctgtcggtgacgagccgccggagctcgcaggagttcagcgga
gtcgccacagaccagacgacacccggctctgcggggtcagaggtcggcgtcggtggctcc
tcctcgtcctcctcctcctcgcccgaagcttcgggagccgtggaggtggttcgacttcct
ctgtctggaccctgggattacgcgctgctctctggaatcggctcttcggtgaagagggtt
cccagcctgctgccggataacgaggacgagctccctcctctgctcatcaccaccggagag
gacgaagcaggagatgttctggttgaggaaagtccggctccgtgtcagatccttcacttg
ttagaagaaggaggacctcgacctctgacgttcgtgctgaacgccaacctgctcgtcaac
gtcaaactggtgacatactgcagccggcagtgctggtgtttcggctcgaacgggcttcag
gctctggggcagagagagttggtgtttctgttggagtgtttgccagaagaaaaagctctt
cctaaagacctcttcacgctctatctcaacatttaccaggaagctcagaaagggaagttt
ctggaggagctggataacgtgacgttcacgagcagctttctgggcagcaaagatcacgcc
gggatgctcttcttctctcccacctgtcagcctctcgacggcctcactctccctcctcag
cctttcctgttcggtctgctcatccagaaatttgaggtgccctgggccaaagtctttcca
ctcaggctgcttctacggctcggagccgagtacagcgtttatcccactccggtgacgagt
gttcgtttccgtgagtccgtgtatcgagagaccggacacaccatcatgaatctgctggct
gacctgaggaactaccagtacagcctgtcggtcgtggagggcctgaggatccacatggag
atgggccacagctacatcgacattcccaaagggagctttaacgagatgcagaaggtggtg
aacgcgtccaacgagcacgtcatcagcatcggagctcgcttcagctcggaggccgactct
cacctggtgtgtttccagaacgaggacggaaactatcagactcaggccaacagcatgccg
ggaaagacccgcacagtgactggagccagttttgtcgtgttcaatggagccttgaaagct
tcctccggcttcatcgccaagtccagcattgttgaagatgggttgatggtgcagattcct
ccggagacgatggagtctctgcgcaccgccctgagggagcagaccgacttccacataccc
tgtggtaggaatgacggagcggaggtccgagaaaacgtcaccgtccgctgggtcgactgg
agttcacctgtcaacacaggtaaaaccagcggtgttgatggtcgacctctggatggagtc
cgcagcgtcagagtccttcaggacacagagttcgagtcggacggacgaactatcaagtgc
actgaggtcttctaccagctcaagaatccggactgcagcctcgcctcggtgctgtcgtcc
tgcagcgtctttcagaaggagatggctttggccacctgcggcgctctgactcctcacctc
accgtcctcacctccagcggcatcaactcgctctctcttcgcatctccacgcaggctgac
atggtggagtaccaggccggttgcggaggtcgactcctccctcagcgctacatgaacgag
ttggacagcgccctgattcccgtcatccacggcggtggcgccagcgtaccgcagaccgcc
atggacatggagttcatcttctacatcactcacaccatctaa
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