Larimichthys crocea (large yellow croaker): 104938644
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Entry
104938644 CDS
T04659
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104938644
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lco03000
]
104938644
03021 Transcription machinery [BR:
lco03021
]
104938644
03036 Chromosome and associated proteins [BR:
lco03036
]
104938644
Transcription factors [BR:
lco03000
]
Eukaryotic type
Helix-turn-helix
ARID
104938644
Transcription machinery [BR:
lco03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104938644
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
104938644
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
104938644
NCBI-ProteinID:
XP_027142035
LinkDB
All DBs
Position
XIII:complement(19852923..19868478)
Genome browser
AA seq
2340 aa
AA seq
DB search
MAAQVASAATLNTSPPSELKRPDRDTKEESVPGEKQSDKKQPGLDSGSPGRGDLQDGADG
GNAGGGGEPEMKNGNGNPPRANNNNQNDSVGPEGNNHPGLVHHHGPAFPPPSYGYSQHYG
RAPFHQHGGQQSPGMAAAAGPVVQSSNMMDPYQPNSHDHGFSNHQFNNYNPFPNRTPYPG
QAYAMNSPRSTQAPTAGGQPANVKQQQPPPAGGPTAMAGSYNNQRYNIGNPQPTSTPTLN
KLLTAPSSTRAYPSYPSSDYSSQEGASKGPADMGSSGLYGGSNPGWQQRSHLPSPMSPGS
AGQPLVRSQPPGPMDPMGKMRGQPYGAGSPYSQQSQQGPPTGPQQGPGYPGQGYGPPGPQ
RYPVGMQGRTPGSMGGMPYGQQMGSYGQQGPGNYGSQGQAPYYGQPGQAPHPSQQQTPYS
QPPQGQPGGQTSYPGQPHPPPTSATHTQGGPPYQQPHMPPQSQGPLPGSSQGPPQSQPPY
SQASAPQSGQSLYAQQQGPPSQAPQQPSSQDTPGSQGQSNYPGSTQGPQQPPSQQQQAQS
QPPQQPPGHSQHPQGQPAVYGQNPQQQQQQQQQQAQQSPYQRFPPPPQQEVSQDSFQSNA
PPSTQPKSGPEDSQGRPSSLPDLSGSIDDLPTGAEGALSPGVSTSGVSSSQGEQSNQAQS
PFSPHTSPHLPGIRGPSPSPAGSPASASTPRTGPLSPANMPGTQMPPRPSSVQSDGSLHP
GMSQSPMAQDRGFMQRNPQMPPYGSPQSASALSPRQSSGGQMHPGMGPYQQNNSMGGYGQ
QGGQYGPQSYPRQPGYGNMPNANYPGPGMGPMNPMAGQGGGPPYTGMQPGRMPPNQMGAR
PYGPNMGPNMGPNMGPNMPPNMGNMPPQVGSGMCPPPGMNRKPQDSTAMQHPATNSMHNR
MPGYPNMSPGMVGSGPPYGPPMNNMPGMMNTQGGSPYPMGPNMANNSSGMAPSPEVNNKM
NNKVDGSVTPKQEPKSKKKSNSSTTTNEKITRLYELGPEPDRKMWVDRYLAFIEEKAMPM
TNLPAVGRKPLDLFRLYMSVKEIGGMTQVNKNKKWRDLATSLNVGTSSSAASSLKKQYIQ
CLYAFECKIERGEDPPPEIFTDNKKNQAAKVQPPSPASLCSTAGSGSLQGPQTPQSTSSS
MAEGGDLKPPTPASTPHSQMPPMPPGSRSSVNLQDPFSEGNDPAFPRKNMTPNSAYQPGM
NTPDMQGRMGAYEPNKDPFGNMRKVGEQFLPANQGPNSGVGDQQQQQPPQQQQQQQQQQQ
QLQQQQQPQQQQQQQQQQQQQPPFNRGPPGAMGTMPMGPRQPYPYGPGYDRRSEQGMGPE
GNMGSGAPQPNPMMPANADTGMYSPNRFPPQQPRHDSYGNQYPGQGTPPTGSYPNQQPGM
YPQQQQSYKRPVEGGYPPSKRHETEYSGPFHGGQQPPQQQQQQPQGGAPVPSSGQQETYN
QYSGSGPYPGPDRRPPGPGNQFPFPFGRERMQGATGPNAQPNMPPQMMQSGPEGPQGGMW
QGPRDMNFQNYPSRQGGPGGPPQGPGYPGMNRSEEMMSSEQRMNHDGQWGGQMGPRQPPY
GPAGPGQPMPRSVQSNYQPPQGVQNHIPQVSSPASMPRPMESRTSPSKSPYMHGVMKMQK
AGPPVPASHIVPPPVQSPLIRRDMPFPPGSIEASHPVLKPRRRLSVKDIGTPEAWRVMMS
LKSGLLAESTWALDTINILLYDDSSISTFDLNTLPGLLELVVEYFRRCLIEIFGILREYE
VGDPGQRTLLDPDALKRDWDSTEEEDPRAEDMEQEEEDDEEEEERDTEGPFHVKEEEEQE
PCSESRGQDKTEDEERKSKGPSSEQTGSSQSLTARERPKQASKFDKFPLKVVRKKDSFAV
GQSNNHGKLQEFDSGLLHWSAGGGDSTEHIQTHFEPRKDFLEPRERIPVPPVLLRRRVPE
EEIQENCLPTEEEKRKHLDEEEERPKETSSSEKSAVSEKGSPSLSSEEERKTDSEAKTVE
KDARSQLESNISPLFPGSVLTKKAQQMGTILEDEPHSKDEGPLIALANWQDSLARRCICI
SNIVRSLSFVPGNDHEMSKHPGLLLLLGRLILLHHRHPERKQAPLTYEKDEDSDEGMGQR
DEWWWDCLGLLRENTLVTLANISGQLNLSIYPETICLPLLDGLLHWAVCPSAEAQDPFPT
LGPHSALSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYGNLVRLIGDRKIAVCRE
MAVVLLANLAQGDTMAARAIAVQKGSVGNLLGFLEDSLAATQLQQSQSSLLHLQGMHFEP
TSPDMMRRAARALHALAKVEENHSEFTLHESRLLDLSVSPLMNSLVSHVICDVLFLIGQS
NT seq
7023 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggtcgctagcgccgccactcttaacactagtccgccttccgaactcaaa
aggccggatcgagacaccaaggaggagtcggtgccgggggagaagcagtcagacaaaaag
cagccgggcttggacagcggatcgccgggccggggggatctgcaggacggggccgacggt
ggaaatgcagggggaggaggggaacctgagatgaagaacgggaatgggaacccgcccagg
gctaacaataataaccagaatgactctgtcggaccggagggaaataaccatcccggtttg
gtgcatcaccacggccccgcgtttcctccaccttcgtacggatacagtcagcactacggt
cgggccccttttcatcaacatggcggacaacaaagccctggcatggcagctgctgcgggt
ccggtcgtgcagtcgagcaatatgatggacccgtatcaacctaattcacacgaccatggc
ttttccaaccaccagtttaacaattacaacccattcccgaacaggactccttatcccggc
caggcatacgccatgaactcccctcgcagtacccaggcgccgacagctggggggcagcca
gctaacgttaagcagcagcagccaccaccagcgggaggacccacggcgatggctggatct
tacaataaccagagatataacattggaaaccctcagcctacatccacaccgacactcaac
aagctcctgaccgcccccagctcaacgcgggcatacccgagctacccgtctagtgactac
agcagccaagaaggagctagtaagggaccagcagacatgggcagcagcgggctgtatgga
gggagcaacccgggctggcaacaaagaagccatctcccgtcgcccatgagcccgggaagt
gccgggcagccgctagttagaagccagccacctggtcccatggacccaatgggaaaaatg
agaggtcaaccatacggagcaggtagtccatatagtcaacagtcgcagcagggacctccc
acaggtccacaacagggacctggttaccctggccaaggttatggccctccaggtccccag
cgatatccagtgggaatgcaaggacgtacccctggaagcatgggtggcatgccgtatggt
caacagatgggatcttatggacagcagggaccaggaaactacggttcccaaggccaagca
ccgtattacgggcagcctggccaggctcctcacccaagccagcagcaaaccccctattcc
cagcctccacaaggacaaccgggtggccagacttcttacccagggcaaccccaccctcca
ccaacttctgctacacacacccagggaggaccaccctatcagcagccccacatgccccca
cagtcccaggggccactgccaggttcatcccaagggcccccacagtctcagcctccttat
tcccaagcatcagctccacagtctggccaatctctctacgcccagcagcagggtcccccc
agccaggccccacagcagccaagctcacaggataccccaggatcacagggccagtccaac
tacccaggatccacacaggggcctcagcagcccccctcgcaacaacagcaggcacagtct
cagcctccacagcagccaccaggacatagccaacacccacagggccagcctgcagtgtac
gggcagaaccctcagcagcagcagcagcagcagcagcagcaagcacaacagtcaccttat
cagcgttttcctccgccaccacagcaggaggtatcccaggactcatttcagtccaatgct
cctccatccactcagcctaaatctggcccagaggacagtcaaggccgtccctcaagcctt
ccggacctgtcagggtccatcgatgacctgcccacaggtgcagagggcgccctgagtcct
ggcgtgagcacgtcaggtgtgtcgagcagccagggcgagcagagtaaccaggcacagtcg
cccttctctcctcacacgtctccccacctgccgggcatccgagggccttcaccttcccca
gctggctcccccgccagtgccagcacaccccgcacaggaccgctgtcacctgccaacatg
ccagggactcagatgcctcctaggccatcaagtgtgcagtcagatgggagtctgcaccct
ggaatgagtcagtctcctatggcccaggacagagggtttatgcagagaaacccccagatg
cccccttatggctcccctcagtcagcttctgcactgtcgccgcgtcagtcctcaggggga
cagatgcatcctggcatgggcccatatcagcagaacaactccatgggtggctatggacag
caaggaggacaatacggcccccaaagttatccccgacaacctggctatggcaacatgccc
aacgcaaactaccctgggccgggcatgggcccaatgaaccccatggcaggacagggtggg
ggaccaccatatactggcatgcaaccaggaaggatgcctcctaatcaaatgggggcacgt
ccttatggccccaatatgggtccaaatatgggccccaacatgggtccaaacatgcctcct
aacatgggtaacatgccaccacaggtaggctcaggaatgtgtcctccaccaggcatgaac
agaaagccccaggactcaacggccatgcagcaccctgccaccaactccatgcacaacagg
atgcctggttaccccaacatgtctccaggtatggtgggctccggccctccctatggtcct
ccaatgaacaacatgcctggaatgatgaacactcaaggtggatcaccttatccaatgggg
ccaaacatggccaataactcaagtggtatggccccgagcccagaggtgaacaataagatg
aataacaaagtagatgggagcgtaacacccaagcaagagcccaaatctaagaagaagtca
aactcctccaccacaaccaatgaaaagataacacgcctgtatgagttaggaccagagccg
gacaggaagatgtgggtggaccgttatttggcctttattgaagagaaagccatgcccatg
accaacctgcctgctgtaggacgtaaaccgctcgaccttttccggctatatatgtcagtt
aaagagatcggaggcatgacacaggtgaacaagaataagaaatggcgtgatctggccact
tccctaaatgtgggtacatccagcagtgctgccagttctttgaagaaacagtacatccaa
tgtctgtatgcctttgagtgcaaaattgagcgcggtgaggaccctccgcctgaaattttc
actgacaacaaaaagaaccaagctgctaaagtccagcccccatctccagcgtccctgtgc
tccacagctggatcaggttctctacagggtcctcagacaccccagtccaccagtagttcc
atggctgaggggggagacctaaaacctcccaccccagcctccactcctcattcccagatg
ccccccatgccacctggatccaggagcagcgttaacctgcaggaccctttctctgaagga
aacgaccctgctttcccgaggaagaacatgacgcccaactcggcctatcagcctggcatg
aacacaccagacatgcaagggcgcatgggcgcctacgagcccaacaaggacccctttggt
aacatgcggaaagttggggagcagtttctaccggctaaccagggccctaacagcggggtt
ggtgaccagcagcaacagcaaccaccacaacagcagcaacagcaacaacaacagcaacag
cagctgcaacaacaacagcaaccgcagcagcagcagcaacaacagcaacagcagcagcag
caacctccattcaacaggggaccgcctggggccatgggcacgatgccaatggggcccaga
cagccgtatccttatggaccaggctacgacaggagatcggagcaaggaatgggcccagag
ggcaacatgggatccggtgctcctcagccaaaccctatgatgcctgccaacgccgacacg
gggatgtattcgccaaatcgctttccaccacagcagccacggcatgattcctatggtaat
cagtatcctggacagggaacgccccctactggctcctacccaaatcagcagcctggaatg
tacccacaacaacaacagagttacaagcgtcctgtggaaggaggttaccctccatcaaaa
cggcatgagacggagtacagtgggcccttccatggtggacaacaaccaccgcagcaacag
caacagcaaccgcaaggaggtgcccctgtaccctcttcaggacagcaggagacgtacaat
cagtacagcggcagcgggccgtaccctggccctgatcgccgtccacctggcccaggcaat
cagttcccctttccctttggtcgtgagcgaatgcagggtgcaacagggcccaacgctcag
cccaacatgccccctcagatgatgcagtcaggccctgagggtcctcagggaggtatgtgg
caggggccccgagacatgaactttcagaactaccccagtcggcagggtggtcctgggggc
ccaccccagggacccggttaccctgggatgaaccgctcagaggaaatgatgtcatcagaa
cagcgcatgaatcatgatggccagtggggcggtcaaatgggcccacggcagcctccttat
ggtccagcaggacctggtcaacctatgcctcgttcagtacagtccaactaccagccccca
cagggtgtgcagaaccacattccacaggtgtccagcccggcctccatgcctcgccccatg
gagagcaggacatcacctagtaaatctccctatatgcacggagtaatgaagatgcagaag
gccggtcctccagtgcctgcgtctcatatagtgccccctccggtgcagtcgcctctaata
aggcgagacatgccttttcccccaggctctatagaagcttcccatcccgtcctgaaacca
cgtcggagactcagcgtaaaagatatcggaaccccggaggcctggagagtcatgatgtca
ttaaagtctggtttattggctgagagcacgtgggccttagataccatcaacattctcctg
tatgatgacagcagtatttccacctttgatctcaacacgttgcctggcctactagagttg
gttgttgagtatttcagacgctgcctcattgaaatctttggcattctgcgggagtacgag
gtgggagaccctggccagaggacactacttgatcctgatgccttgaaacgagactgggac
agcacagaagaagaggatccacgtgctgaggacatggaacaagaggaggaagatgacgaa
gaagaggaggaacgggacacagaggggccatttcatgtgaaggaggaggaagagcaagaa
ccttgctctgagtctcgggggcaagataagaccgaggatgaggagcgaaagagcaagggt
ccttcatctgaacagacaggctcatcgcagtccttaactgcccgcgagagacccaaacaa
gctagtaagtttgacaagtttcccctaaaggtggtacgaaagaaagactcatttgcggtt
ggccagtctaataatcatggcaaactgcaagagtttgacagtgggttgcttcattggagt
gctggagggggagactcgacagaacacatccagactcactttgaaccacgcaaagacttc
ttggaaccacgagaacgaatacctgtgcccccagttttgctgaggcgacgagtcccagaa
gaagagatacaggaaaactgtttgccaaccgaggaagagaaaaggaagcatctggatgaa
gaagaagaaaggcccaaagagacatcttcctcagagaaatcggcagtctcagagaagggc
agcccctcgctcagcagtgaggaggagaggaaaacagattctgaggcaaagacagttgag
aaagatgctagaagtcaactggagagtaatatatcccctcttttccccggcagtgtctta
acaaagaaggcacagcaaatgggcaccatcctggaggatgagcctcacagtaaagacgag
ggcccactcattgcactggctaactggcaggattctttagcccgacgctgcatttgtatc
tccaacattgtccgcagcctctcctttgttccaggcaatgaccacgagatgtctaaacat
ccagggctgctactgctgctgggacgcctgatcctgctccaccacaggcaccctgagcgc
aaacaggcaccgctaacctatgagaaagatgaggattcagacgagggaatgggccaaagg
gatgaatggtggtgggactgcttgggtctcctgagggagaacacgctggtcactttggcg
aacatctcaggccaactcaacctctccatctaccctgagaccatctgcttgcctctgttg
gacggtcttcttcactgggctgtctgcccttcagcagaggctcaggaccccttccccacc
ctgggtccccacagtgctttgtcacctcaaagactggtcctggagacgctaagcaaacta
agcatccaagacaacaatgtggacctcatcttggccactccgccattcagtcggctggag
aagctatacgggaacctggtgcggctaattggtgacaggaagatcgcagtctgcagggag
atggccgttgtcctactggcgaacctggcccagggtgacactatggctgcccgagcaatc
gctgttcagaaaggtagcgtgggcaacttgctgggcttcctggaggatagtctggctgcc
acacagcttcagcagagccagagctctctactacacctgcaggggatgcacttcgagccc
acaagcccggacatgatgcggcgagctgcccgggctctgcacgccttagccaaggtggag
gagaaccactcagagttcacactacatgagtcccgactcctcgacctttcagtgtctccc
ctaatgaactcgttggtttctcatgttatctgtgatgtactctttttgattggccagtca
tga
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integrated database retrieval system
