Larimichthys crocea (large yellow croaker): 104938712
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Entry
104938712 CDS
T04659
Name
(RefSeq) ATP-dependent RNA helicase DDX19B
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03013
Nucleocytoplasmic transport
lco03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104938712
03015 mRNA surveillance pathway
104938712
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lco03019
]
104938712
Enzymes [BR:
lco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104938712
Messenger RNA biogenesis [BR:
lco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
104938712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
Motif
Other DBs
NCBI-GeneID:
104938712
NCBI-ProteinID:
XP_027135178
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Position
VI:1000851..1006782
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AA seq
488 aa
AA seq
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MATDSWAQAVDEQEAAAESIGNLQIKEKREENGTTSNATDSSSAAAKSEADGDSKTTDDD
DKEDKAAQSLLNKLIRNNLVNNTNQVEVLQKDPNSPLYSVKSFEELRLKPQLLQGVYGMG
FNRPSKIQETALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVDPNNKYPQCLCVSPT
YELALQTGKVIEQMGKHYPEVRLVYAIRGNKLQRGMKLQEQIVIGTPGTMLDWCAKFKFI
DPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPKNCQMLLFSATFEETVWNFAQRIVPD
PNIIKLKREEETLDTIKQYYVLCNSREEKFQALCNVYGAITIAQAMIFCHTRKTAGWLAG
ELSREGHQVALLSGEMQVEQRAAVIDRFRDGKEKVLVTTNVCARGIDVEQVSVVINFDLP
VDKDGNPDNETYLHRIGRTGRFGKRGLAINMVDSRMSMNILNKIQEHFSKKIEKLDTDDL
DEIEKIAS
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggccacggactcctgggcgcaggcggtggacgagcaggaagccgcggcggaatcgatc
ggcaaccttcaaatcaaagagaaacgtgaggaaaatggcacgacctcaaacgcgacagac
tccagcagtgcagctgcaaagtcagaagctgacggagacagtaagaccacagatgacgat
gacaaagaggacaaagcggcacagtcattgttaaacaagctgatacgaaataatctcgtc
aataacactaatcaagtggaagtccttcagaaggatcccaactctccgctctactccgtc
aagtcctttgaagagttacgactcaaaccacagctgcttcagggtgtttatggcatgggg
ttcaaccggccatccaaaatccaggagaccgccttacccatgatgctggccgaacctcca
cagaatctgattgcccagtcgcagtcaggaacagggaaaacagctgcctttgtcctggcc
atgctcagtcatgtagaccccaacaacaaatatccccagtgcctctgtgtgtcacccacg
tatgaactggcccttcaaactggcaaggtaatcgagcagatgggcaaacactatcctgag
gtcagactagtctacgccatcagaggaaataaattgcagcggggcatgaagctgcaggaa
cagatagttattggcacacctggtaccatgctggactggtgtgctaaattcaagttcata
gaccccaagaagatcaaggtgtttgtactggatgaggccgacgtcatgatcgccacacag
ggccaccaggaccagagcatccgcatccagaggatgctgcccaaaaactgccagatgttg
ctgttctctgccacgtttgaagagaccgtgtggaactttgcccagcgcatcgtgcctgac
cccaacatcatcaagctgaagcgagaagaggagacgctggacaccatcaagcagtactat
gtgttgtgcaacagcagggaggagaagttccaagccctctgtaacgtctacggagccatc
accatcgcccaggccatgatcttctgccatacaaggaaaactgcaggctggctggcaggg
gagctgtccagagaaggtcaccaggtggcgctgctcagcggcgagatgcaggtggagcag
agggctgctgtcatcgaccgcttcagagacggcaaggaaaaggtcctggtcaccacaaac
gtttgtgctcgaggtattgatgttgagcaggtttctgtggtgatcaactttgacctgccg
gtagacaaggacggcaacccagacaacgagacgtacctgcacaggatcggccgcacaggt
cgatttggcaaaaggggactggccatcaacatggtcgacagcaggatgagcatgaacatc
ctcaacaagatccaggagcatttcagtaagaaaattgaaaaactagacacagatgatctg
gatgaaatcgagaaaatcgccagctaa
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