Larimichthys crocea (large yellow croaker): 104938768
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Entry
104938768 CDS
T04659
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lco04121
]
104938768 (rlim)
Enzymes [BR:
lco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104938768 (rlim)
Ubiquitin system [BR:
lco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104938768 (rlim)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
104938768
NCBI-ProteinID:
XP_010753519
LinkDB
All DBs
Position
I:37467510..37474641
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AA seq
731 aa
AA seq
DB search
MEGSDSLEQSGSDQPESQRRRQLDRLGREEAFYQFVNNLSDEDYRLMRDNNLLGTPGEVT
EDELFSRLQQIKDGPEQQNNTPSAENGEDPVEPPESSEDPAGGDSLLDWLNTVRRTGNTT
RTGHRGNQSWRAVSQTNPNSGDFRFSLEISVNRNLAEQQAAAEGEQEVPEEARGEASGEA
GGEASREAGGGASGEAGGGASGEAGGETSGEAGGGASGEARVEASGEAQGEASRETPGEA
SEESPEVAPEMAPEMALEMASEVQEPVVNAEPPVPMETEVVEEPVVEELAVIVEPEPELE
EVVSQEILGEPPSPPAAPPVQPPLSPSPRRGQRRARSRSPEPRRTRARTARSRSPLNLDQ
LDGLHNPRHVLSSQGPISANAPTVPQVEGSSRTRQHVLSRQSTSDSDVQPSRASAEPAPE
VQNVASQEGEAAGGEGGAAGRRPPTIMLDLQVRRVRPGEYRQRDSIASRTRSRSQNSNNT
FLYESERGGFRRTFSRSERAGVRTYVSTIRIPIRRISDAGLGEATSMALQSMIRQIMTGF
GELGYLMDSDSDSSDSNRGANTPADLAEALNNTDTTPAAAPAADVDVEPPMAAGVRARTA
ETDVDESLATAPPASGGRARSRPPINLEEPGSLPFLRLAHFFLLNDDDEDQPQGLTKEQI
DNLSMRNFGESDALKTCSVCITEYAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRA
VLVSANRESVV
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggaagggtctgacagtttagagcagagtggcagtgaccagccggagtcacagcgcaga
aggcagctggaccggctgggcagggaggaggccttctatcagtttgtcaacaatctcagt
gatgaggactatcgtctcatgagggacaacaatcttttgggcaccccaggtgaggtcaca
gaggatgagctgtttagtagacttcagcaaattaaagatggtccagaacagcagaataac
actcccagtgctgaaaacggagaagatccagttgaaccaccggaaagctcggaggatcct
gccggtggggatagtctcttggactggctgaacacagtgaggcgtacaggcaacacaact
aggactggtcatcgtggaaaccagtcgtggcgagctgtaagccagaccaacccaaacagt
ggtgattttcgctttagtctggaaatcagtgtgaaccgcaacctggctgagcagcaggca
gctgctgaaggcgagcaggaggttccagaggaggcgcgaggagaagcttcaggggaggct
ggaggagaagcatcacgggaggcaggagggggagcttcaggggaggctggaggaggagct
tcaggggaggctggaggagaaacttcaggggaggctggaggaggagcttcaggggaggct
cgagtagaagcttcaggggaggctcaaggagaagcttcaagggagactccaggagaagct
tcagaagagtctccagaggtagctccagagatggctccagagatggctctagagatggct
tcagaagttcaagaaccagtggtaaatgctgaaccaccggtccccatggaaacggaagtg
gtggaagagccagttgtagaggagttagctgtcatagtggaaccagagcctgaactcgaa
gaggttgtttcacaagagattttaggggaacctcccagcccacctgctgccccgccggta
caacccccactttctccttctccacgcagaggtcaaaggagagctcgcagccgcagtcca
gaaccacgcaggactagggcccgtacagccaggagccgttcccctcttaacttggatcaa
ctggacggtctccataatccacgtcatgttctcagctctcaaggccccatctctgccaat
gcccccactgtacctcaagtggagggcagctctcggactcgacagcatgttctttccagg
caaagcacttctgacagtgatgttcagccatctagggctagcgcagaaccagccccagag
gtccaaaatgtcgcatctcaggaaggagaagctgctggtggggaagggggcgcagcagga
cgccgccctcctacgattatgctcgatctccaggtgcgccgcgtgcgtccaggtgaatat
cggcaaagagacagcattgctagtcgtacccgctcacgctcccagaactcaaacaacaca
tttctttatgagagtgagcgtggtggatttcgtaggactttctcacgctctgagcgtgct
ggtgtgaggacctacgtcagcactattcgcatccctattcgtagaatctctgatgcaggt
ttgggagaggcaacctcaatggctctccagtctatgattcgacagattatgactggtttc
ggagaactcggctacctcatggattcagactctgattcttcagattcaaaccgtggcgcc
aacacacctgcggatctggctgaagccctaaacaacacagatactactcctgctgccgct
cctgctgctgatgtcgacgttgaaccacctatggctgctggagtcagagcaaggacagct
gaaactgacgtagacgagagccttgccactgctccacctgcctctggtggcagggctaga
tccagaccacctattaacctagaggagcccggctcactgcccttcctgcgactcgcccac
ttcttcctcctaaacgatgatgacgaggaccagccccaagggctgaccaaagagcaaatt
gataacctctccatgcgtaactttggtgagagtgatgccttgaagacttgcagtgtctgc
ataacagaatatgcagaaggtaacaagctacgtaagctgccctgttctcatgagtaccat
gtgcactgcattgatcgctggctgtccgaaaactccacttgccccatctgccgcagggct
gtcttggtatcggccaacagggagagtgtggtgtag
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