Larimichthys crocea (large yellow croaker): 104939043
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Entry
104939043 CDS
T04659
Symbol
tulp4
Name
(RefSeq) tubby-related protein 4
KO
K24720
tubby-related protein 4
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lco04990
]
104939043 (tulp4)
Domain-containing proteins not elsewhere classified [BR:
lco04990
]
Other domain-containing proteins
Tubby family proteins
104939043 (tulp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR35_TULP_N
Tub
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_WDR19_1st
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40_Prp19
Beta-prop_HPS5
WDR55
Beta-prop_ELP1_1st
DUF3527
Motif
Other DBs
NCBI-GeneID:
104939043
NCBI-ProteinID:
XP_010753818
LinkDB
All DBs
Position
XI:8922096..8948596
Genome browser
AA seq
1635 aa
AA seq
DB search
MFAAVEHGPVLCSDSNILCLSWKGRVPKSEKEKPVCRKRYYEEGWLATGNGRGVVGVTFT
SSHCRRDRPTPQRVNFNLRGHNSEVVLVRWNEPFQKLATCDTDGGIFVWIQYEGRWSVEL
VNDRGAQVSDFTWSHDGTQALISYRDGFVLVGSVSGQRHWSSEINLESQITCGIWTPDDQ
QVLFGTADGQVIVMDCHGRMLAHILLHESDGIVSMSWNYPSFLVEDSSESDTDSDDYSPP
QVHSQKPLLTVSFTSGDISLMNNYDDLSPTLVRTGLKDVVVQWCSQGDLLAVAGMERTLL
SPDPSCPPPTRNAIVKFYNVRGEHIYTLDTPAQRPITTLCWGHRDSRLFLACGPALYVVR
VEHRVANLQLLCQQGIATAVKEEKDVAKLTMPSRLCSYVTTAFVPTIKPPIPDPNNMRDF
VSYPTAGNERLHCTMKRTEDNPEVGGPCYTLYLEYLGGLVPILKGRRISKLRPEFVIMDP
KTDGKTDEIYGNSLISAMIDSCNCSDSSDIELSDDWVGKKSPKISRGSKSPKLPRINIDP
RKSPKLSRATQEISRSPRLPIRKPSIGSPSLTRREFPLDDITQQNYLAQVTSNIWGTKFK
IVGLATFLPTNLGAVIYKTSLLHLQPRQMTIYLPEVRKISMDYINLPVFSPNVFSEDEDD
LPATGPAGGADDNPPCTVNIPIAPIHSPAQAMSPAQSIGLVQSLLANQNVQLDVLTNPTA
NPAGAAASGSDQSQDTILTAQYTVPTRYSSPGQVIFGGLEMGRLMVGPPPSQIPHPPADL
VVERAAGGDHEHLLKIKTTRSTPQLAEGDTVVFSAPLELSKMNPPPPYPGTVAAAVAAAA
AAAASASASTAASNPASGTGGSTSGTPPPGDVCMKKGEFPLYASGQQQAQYPTPLGYERI
TTFDSSGNVEEVCRPRTRLVCNQNVYTLQGPGSSATLRVTSSSSSSSSSSSSADKKIQLP
YTSATLNRLTAPRYSIPSGDPPPYPDPANQNGAVGRNSGQRLDSSLIHATLRRNSREAAL
KVSQMLEPPRPLPPKAKNSGALAASFQQRVPTALYTCSQCSSGSNVGGTAPGSANGIAGG
TIIRQDFPPGNGAPHSTVIVHSNSATPLASQSSYNLLSSLEGSGTAAGGGGSNRDRADYV
NSAFTEDEALNQSLRHLALGGNDASGLVVKRPPPYQWDPAATEEVWVPQERTATLNPNAP
SGPHKPPPLILSPAQHLDVSRLPFVLSPKSPTSPSAASFQAAAAAAGYQISLQYPPATAY
SGAQLQPIPGSPRPCSSPKEMVAPVPFSQQDATLVLPPGYSANLANLACCPLPPMYPGGS
ACAGLPIPPIALHTPWGTYNSCPPMPSPSVPLPPKASHIAIDKNVLSPPPPPPPPPPPPP
PAELQSHGGLQEAMAEAGEGFQEVLSLTESPVPQRSEKLSKKNRKRVDGRAEEANVPPLA
EGSKSKKEGRALGDFNSLISSPRLGGRDKKKLKGQKEQQLKAKKLNKATANSEFQDSSES
EPELFISGDELLNQCQSGKKGWKTKRNLRAASELDEIKCRKANEKEDRGLGSQGFVYVMA
NKQPLWNEATQVYQLDFGGRVTQESAKNFQIELEGRQVMQFGRIDGNAYILDFQYPFSAV
QAFAVALANVTQRLK
NT seq
4908 nt
NT seq
+upstream
nt +downstream
nt
atgttcgccgccgtggagcatggccccgtcctctgcagcgactccaacatcctgtgcctg
tcatggaagggccgggtgcccaagagcgagaaagagaagccggtgtgtcgtaagcgttac
tacgaggagggctggctcgcaactgggaacggacgaggagttgttggggtcacgttcacg
tccagccactgcagaagggacaggcccaccccgcagagagttaacttcaacctcagagga
cacaacagcgaggtggtgttggtgcggtggaatgagcccttccagaaactggccacctgt
gatacagacggagggatctttgtttggatccagtatgagggccgctggtctgtggagctg
gtcaatgaccgtggagctcaggtgagtgacttcacctggtcccacgatggcacccaggct
cttatctcctaccgagatggctttgttctggtgggatcagtcagcgggcagagacactgg
tcctccgagatcaacctggaaagccagattacctgtggtatctggacccccgatgaccag
caggtgttgttcggtactgcagatggacaggtgatagtgatggactgccacgggcgcatg
ctggcccacattctgctgcatgagtcggatggcatcgtcagcatgtcctggaactatccc
agtttcctggtggaggacagcagtgagagcgacacggactctgacgactactccccacct
caagtgcacagccagaaaccactgctgactgtcagcttcacctctggagacatcagcctg
atgaacaactacgatgacctctctcccaccctcgtccgtaccggtctgaaagatgtggtg
gtccagtggtgctcgcagggggacctccttgcagtggcagggatggagaggaccctcctc
tcccccgacccctcatgtcctccccccaccaggaacgccatcgtcaagttctacaacgtt
cggggtgaacacatctacacactggacacaccagcacagcgccccatcactacgctgtgc
tggggtcaccgggactctcgtctgttcttggcctgtggcccggcgctctacgttgtgcga
gtcgagcaccgcgttgccaacctgcagctgctctgccagcagggcatcgccacagcagtg
aaggaggagaaagatgtcgccaagctcaccatgccttcccgcctttgttcttacgtcact
actgcttttgtccccaccatcaagccccccatcccggatcccaacaacatgcgtgatttt
gtgagctacccaacagctggaaacgagcgcctgcactgtaccatgaagcgtacggaagat
aaccctgaggttggaggaccatgctacactctgtacctggagtacctaggaggtctggtg
cctatcctaaaaggcagacgaataagcaaactgcgtccagagtttgtcattatggacccc
aagacggacgggaagacagatgagatatacggcaacagtctgatatctgccatgattgac
agctgtaactgctcagattccagcgacatcgagctgagtgatgactgggttggcaagaaa
tctccaaagatatccaggggcagcaaatcccccaaactgcctaggatcaacattgatccc
agaaaatcacccaagctgtcgcgtgctacacaagagatctccaggtcaccacggttacct
atacggaaaccctcgattgggtcacctagtctaacacggagggaatttcctctcgacgac
attactcagcaaaattacctcgctcaggtcacatccaatatttgggggacaaagtttaag
attgtggggctggccacattcttgccaaccaatcttggtgcagtcatctataagacaagc
cttctccatctgcagcccagacagatgaccatctaccttccagaggtgcgcaagatctcc
atggactacatcaatctgcctgtcttcagccccaacgtcttcagtgaagatgaagatgat
ctgcctgccacaggccctgctggtggtgctgacgacaacccgccctgcactgtcaacatc
cctattgcccccatccatagtcccgcccaggccatgtcccccgcccaaagcatcggcctg
gtccagtcactcctagccaatcaaaatgttcagctggatgttctaacgaatcccacagct
aaccctgctggggctgctgctagtgggtcagaccaaagccaggacaccatcctgacagcc
cagtacacagtacccaccagatactccagtcctggtcaggtcatctttgggggactagaa
atgggtcgtctaatggtgggacctccaccttctcagatccctcatccacctgctgattta
gtggtagagagagcagcgggaggagaccacgagcacctactgaaaataaaaaccactcgg
tcaactccacagctggctgagggtgatacggtggtgttcagtgcccctctagagctcagc
aagatgaaccccccgcctccctacccagggacagtggctgctgctgtggctgctgcagca
gctgctgctgcttcagcttcagcctccaccgcagcctccaaccctgcatctggaacagga
gggagcaccagtgggactcctccccctggtgatgtttgtatgaagaagggcgagttccca
ctttatgcttcaggtcagcaacaagctcagtaccccacaccactgggatatgagaggata
acaacatttgacagcagtgggaatgttgaggaagtgtgtcgtcctcgaacacgcctcgtc
tgcaatcagaatgtctacacactccagggacctggcagctctgccactctcagggtcacc
tcctcttcctcatcgtcctcctcctcctcctcctcagctgacaagaagatccagctgccc
tacacctctgccaccctcaacagacttactgcacctcgttattccatacctagcggagac
ccgcccccataccctgacccagccaatcagaatggtgctgttggcaggaactctggacag
aggctcgacagcagtctgatccacgccactctcaggaggaacagccgagaggccgctctc
aaagtttcccagatgttggaaccacccagaccgctgcctcctaaggccaaaaatagcggt
gcactagcagcttcgttccagcagagggtgccaacagccttatacacctgcagtcagtgc
agcagtggatccaatgttggaggcactgccccagggagcgctaatggaatcgcaggagga
actatcatcagacaggatttccctccagggaacggggcgccacacagcacagttattgtt
cattccaacagcgccactcctctggcctcccagtcctcttacaacctgctgagctctctc
gaagggtctgggactgcagcaggaggaggaggaagtaacagagacagggctgattatgtt
aattcagcatttactgaggatgaagcactgaatcagtcactgaggcatctggcgctcggc
ggaaatgatgcatcagggctggttgtcaaacgcccacctccctatcagtgggacccagct
gccacagaggaagtgtgggttcctcaggaacggacagcaacactaaatcccaatgccccc
tctggaccccacaaaccacccccacttattctcagcccggctcagcacttggatgtgtcc
aggctgccttttgtcctttctccaaagtcccccaccagccccagtgctgcatcatttcaa
gctgctgcagcagctgcaggctaccaaatctctctccagtacccgccagcaactgcctat
tctggagcccagctccagcccatcccggggtcaccacgcccttgttcctctccaaaggaa
atggtggcaccggtacctttttcacagcaggacgcaacccttgtcttacctccaggttac
tctgcaaatcttgcaaacctagcttgctgccctctcccacccatgtatccaggaggaagt
gcttgtgctgggcttcccattccccctatcgcccttcacactccttggggtacatataac
tcttgcccgcctatgcccagtccttcagtgccactaccacccaaagcctcccacattgca
atagacaaaaatgttctctcgcctccgcctcctcctcctcctccaccccctccaccacca
ccagcagagctgcagagccatggaggattgcaagaagctatggcagaggctggggaaggt
tttcaagaggtgctctccttgactgagagccccgtgccacagcgatctgagaagttaagc
aagaagaaccgcaagcgggttgatgggcgcgctgaggaggctaatgtgccacccttagct
gaagggagcaagtcaaaaaaagagggcagagctttgggtgacttcaactcactcatctcc
agtccacggctcggaggaagggacaagaaaaaactcaagggacagaaagagcagcaattg
aaggcaaagaagctgaataaggccactgccaatagtgagttccaagatagctcggaaagc
gagccagagctgttcatcagcggggacgagctgctcaaccagtgccagagcggtaagaag
ggctggaagacgaagaggaacctgagggctgccagcgaactggacgagatcaagtgtcga
aaggccaacgagaaggaggacagaggactgggcagtcaggggtttgtgtatgtcatggcc
aacaagcagccactgtggaacgaagccacacaagtctaccagctggactttggtggacgc
gtcacacaagagtctgccaagaactttcaaatcgaactggagggcagacaggtgatgcag
tttggcaggattgacggcaacgcgtacatcctggacttccagtatcccttctctgctgtg
caggcctttgcagtggctttagccaacgttacacaacgcctcaaatga
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