Larimichthys crocea (large yellow croaker): 104939110
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Entry
104939110 CDS
T04659
Symbol
rtel1
Name
(RefSeq) regulator of telomere elongation helicase 1 isoform X1
KO
K11136
regulator of telomere elongation helicase 1 [EC:
5.6.2.3
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lco03032
]
104939110 (rtel1)
Enzymes [BR:
lco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
104939110 (rtel1)
DNA replication proteins [BR:
lco03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
104939110 (rtel1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
ARCH_RTEL1
HHD_RTEL1
ResIII
DEAD
DUF3708
Motif
Other DBs
NCBI-GeneID:
104939110
NCBI-ProteinID:
XP_010753893
LinkDB
All DBs
Position
Unknown
AA seq
1175 aa
AA seq
DB search
MSSLTLNGVTVNFPFPPYNCQKDYMSKVIECLQRKVNGVLESPTGTGKTLCLLCATLAWR
EHFKDTISARKIAEKLGGEEMFPNTPLSSWGTAATDGDTPTYYTDVPKIIYASRTHTQLA
QVISELKNTSYRPKVCVLGSREQLCINQEVMRQESNHVKVHMCRAKVSTRSCIYYNNVEE
KSTDRELVDSILDVEDLVKFGNKQRACPYYLSRSLKQQANVIFMPYNYLLDPKSRRAHNI
ELKGAVVIFDEAHNVEKTCEESTSFDLTPYDVASAINAVDRLLVEQAKDVSHEDFNADSL
NSGLKVELDTIAKIKQILLDLEAAIDSYDVPSDKGITKPGIFIYELLERAHLTYNSKTAV
CEALEQISGYLAGQPGIFLNTSGLQKLADIIQLVFCGEPSEKDRLQQMQSNTAHFKVHIH
RDTNYHKKKSTDVWASSSSSSKKQGNILSYWCFSPGFSMQDLVNQGVRCIILTSGTLSPL
SSFTSEMRIEFPVTLENGHVIERDQIFVSIIDRGPDGVHLSSAFDRRFIPENMASLGNTV
ANLSRVVPHGLLVFFPSFPLMEKTLDFWRAKGHADRIETIKPMFVEPKGKGTFNEVIDGY
YNKVNDPASKGGSFFAVCRGKASEGLDFANTFGRGVIITGLPFPPKMDPKVILKMQFLDE
MSRTKTGLKYLSGQQWYKQQAFRAVNQAIGRVIRHKEDFGAIFLCDQRFKGSDAQAQLPL
WVRPYVRLYDCFGNVVRDVSQFFRVAQKMRPVVEKRAAAERCGTVCLPDTQASGFTSCSS
YQSSHTQKAKALDAHLPSLKRRKLNEYTGADGMARICVEYECDVQESQRRPANLLDALER
GDHCSGEDNDTVMGAKVNRLSTLSLQYDKRMDDELRGGKRKIKLVKQPKISQSEDVCEEG
KASRTKTFLSEMKKSLSQVNFDCIVQALQTYKKTDNLDVLLTETVVLAGDANTHSLLRGI
YQFVRPHHKKRFDENCQELTGQGCGYKPDHSLAKDMKKANTLHGATDRQTVAGLTSSSGK
STCSQLNTQQLNRGGQHLNQQGLKEPQTGTAPKSDVHATFLADVKQALGAEKSAQLFQAI
YSYKKTDNYENVVTIVVSLFTERDEDIHLLIRFGMFIRPHHKEQYKHMLEALTGQSFSAA
DVPAVNEHQQRDASSSQTLKAQSKISSFFSSRQNK
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcactaactttaaacggagtgacggtgaattttccctttcctccgtataactgt
cagaaagactacatgagcaaagtgattgaatgtcttcagaggaaggtgaatggcgttctg
gagagtcctacaggtactgggaaaaccttgtgtctgctgtgtgccaccctggcctggaga
gagcacttcaaggacaccatcagtgcgcgcaagatagcagagaagctgggtggcgaggag
atgttcccaaacacgcctctgtcatcctgggggacggctgctacagacggtgacacacca
acctactacacagatgttcccaagatcatttatgcatccaggacacacactcagcttgca
caggttatcagtgagttaaagaacacttcatacaggccaaaggtgtgtgttctgggatca
agagaacagctgtgtatcaaccaggaagtgatgcgtcaggagagtaaccacgtcaaggtc
catatgtgcagagcaaaagtttccaccaggtcatgtatctactacaataacgttgaagag
aagagtaccgacagagaattggtggattctatccttgatgtggaagatttggtcaaattt
ggcaacaaacagagggcatgtccttactacctctcccgttccttgaaacaacaagcaaat
gtcatttttatgccgtacaactaccttctggatccaaagagccgtagagcacataacatt
gagctaaaaggagctgtggtcatctttgatgaagctcataatgtggagaagacatgtgaa
gaatcaacatcatttgacctgactccctatgatgtagcttcagccattaatgctgtggac
aggctgctggtggagcaggctaaagatgtcagccatgaagacttcaatgcagactccctc
aactctggtttaaaagtggaattagacaccattgccaaaattaaacagatactgctggat
ctggaagctgccatcgattcctacgatgttccaagtgacaaaggcatcacaaaacctgga
atcttcatctatgagctgttggagagagcccatctgacctacaacagcaagacagcagtc
tgtgaagctctggagcagatcagtggatacttggcaggacaaccaggaatattcctgaac
acaagtggactgcagaagttggctgatatcatacagctggtgttctgtggagagccgtca
gaaaaggacagactgcagcagatgcagtccaacacagctcattttaaggttcatatccat
cgagacaccaactatcacaagaaaaaaagcactgatgtgtgggcttcatcttcatcttca
tcaaagaaacaaggcaacattctgagttactggtgcttctctcctggcttcagtatgcag
gacctggtgaatcaaggtgttcgctgcatcattctgaccagtggtaccctctctcccctg
tcttcattcacttctgagatgaggatagaattcccagtgactctggagaacggtcatgtg
attgagcgggatcagatctttgtgagcattattgaccggggccctgatggagtgcattta
agttcagcgtttgatagaaggtttatccctgaaaatatggcatctttaggcaacaccgtg
gccaacctgagtcgtgtggttcctcatggtctcttagtgttttttccctctttcccctta
atggaaaaaactctggacttctggagagctaagggacatgcagatcgcattgaaactata
aagcccatgtttgttgaacctaaaggaaagggcacctttaatgaggtcattgatggatat
tataacaaagtcaatgatccagcatccaaagggggaagcttctttgctgtatgtcgaggg
aaggctagcgagggtctggattttgccaatacttttggtcgcggtgtcatcatcaccggc
cttcctttccctcccaagatggaccctaaagtcatcctgaagatgcagttcttggatgag
atgagcaggacgaaaactgggctgaagtacctgtctgggcagcagtggtacaagcaacag
gctttccgagctgtgaaccaggcgattgggagagtcattcgccacaaggaggactttgga
gctatcttcctgtgtgatcagaggtttaaaggcagtgatgcccaggctcagctgccattg
tgggtcaggccttatgtgcgtctgtatgactgctttgggaatgtggtccgtgatgtctct
caattcttcagggttgcacagaaaatgaggcctgtggtagagaagagagctgcagcagag
cgctgtggaacagtgtgtttaccagacactcaggcctctggcttcacttcctgctcatcc
taccaaagctcccacacccagaaggccaaggcgctagacgctcatcttcccagcctgaag
aggaggaaactcaatgaatacactggagctgatgggatggccaggatctgtgttgagtat
gagtgtgacgtacaggagagtcagcgaagaccagccaacctgctagacgctctagagcga
ggtgaccattgcagtggagaagacaatgacactgttatgggagcgaaggtaaatcgtttg
tccacactatctcttcagtatgacaagagaatggatgatgaattgcggggaggcaaacgt
aaaatcaaattggtcaaacaaccgaaaattagccagtctgaggacgtgtgtgaggaaggt
aaagccagcaggacaaagactttcctgtcagagatgaagaagtcactgagccaggtcaac
tttgactgcattgtacaagctctgcagacctacaagaagaccgacaacctggacgtcctg
ctgactgagacagttgtcttagctggagatgctaatactcacagtctgcttcggggtata
taccagtttgttcgtccacatcacaagaagaggtttgatgagaactgccaggagctgact
gggcagggctgtggatacaaacctgatcactcactggctaaagacatgaagaaagcaaac
acactgcatggcgctacagacagacagacagttgcgggcctaacatcctccagtgggaag
tctacctgcagtcagctgaatacacagcagctcaacagaggaggacaacacctaaaccag
cagggactaaaagaacctcaaactggaactgctccaaagagtgatgtccatgctactttt
ctggctgatgtgaaacaagccctcggagctgaaaaatcagctcagctctttcaggctatt
tacagctacaaaaagacagacaactatgaaaacgtggtgaccatagtggtgagcttattt
acagagagagatgaggacatccaccttctaatcagatttggcatgtttatccgtcctcac
cataaggagcagtacaaacacatgttggaagctttgacaggtcagtcgttctctgcggct
gatgttcctgctgtgaatgaacaccagcaaagagatgcttcatcatcacaaactttgaag
gcacaaagcaagatttctagttttttctcaagcaggcaaaataagtag
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