Larimichthys crocea (large yellow croaker): 104939163
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Entry
104939163 CDS
T04659
Name
(RefSeq) low-density lipoprotein receptor-related protein 5
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04150
mTOR signaling pathway
lco04310
Wnt signaling pathway
lco04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
104939163
04150 mTOR signaling pathway
104939163
09133 Signaling molecules and interaction
04519 Cadherin signaling
104939163
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104939163
Membrane trafficking [BR:
lco04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
104939163
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
LRP1-like_beta_prop
Vgb_lyase
EGF_LRP2
SGL
cEGF
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
104939163
NCBI-ProteinID:
XP_019128832
UniProt:
A0A6G0IZS0
LinkDB
All DBs
Position
Unknown
AA seq
1648 aa
AA seq
DB search
MGLTRRGLEMGGLLVLVLLRSCLLSAVDGTPLLLFANRRDVRLVDAEGIRGESAIVVSDL
EDAAAVDFMYAEGLIFWTDVSEEAIKQTHWNQSSNSLKEALGTGQTVVVSGLDSPDGLAC
DWLGRKLYWTDSETNRIEVANLDGTSRKVLFWMDLDQPRAIALNPNQRYMYWTDWGEEPR
IERAGMDGSNRKVIVDVDIYWPNGLTIDLVEQKLYWADAKLSFIHRANLDGSARETVVEG
TLTHPFALTLSEETLYWTDWQTRSIHACNKHNGDKTREILSGIYSPMDIQVLEPYRQPYI
QTPCSDNNGGCSHLCLLSPVQPFYSCACPTGVQLKPDGKTCKPGAEQVLLLARRTDLRRI
SLDLPDFTDIVLQVDDIRHAIAIDYDPVEGYVYWTDDEVRAIRRSHIDGSNAMMLVTTEI
NHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILISENLDEPRAIVLDPVNGYMYW
TDWGEHPKIERANLNGMDRVVLLNSSLGWPNGLAIDYAAGKLYWGDAKTDKIEVINVDGS
NRQTLLEDKLPHIFGFTLLGDYIYWTDWQRRSIERVHKATAVREIIIDQLPDLMGLKATK
VTETYGTNGCAVNNGGCSHLCFWCRQAVSCACPMGMELLSDLQTCVVPEAFLLFTNRDNI
RSISLGTNSNDVAIPLTGVKEASALDFDVSERRIYWTDIQAKTISRAYMNGSSVEHVIEF
GLDYPEGMAVDWMGRNIYWADTGTNRIEVARLDGQYRQVLVCKDLDNPRSLDNPRSLALD
PANGYMYWTEWGGRPRIARAYMDGSTITTLVDKVGRANGLTIDYVDHRLYWTDLDTCMIE
STNMQGLQREIIVDDLPHPFGLTQYRDFIYWTDFNLRSIERADKRSGLNRTVVLQGQLEL
MLDILVFHSSRQEGTNECSHNNGNCAHLCLATPAGAQCRCASHYTLNTDGRNCSSPSSFL
LFSQKASISRMVLGEQSPDIILPIHVLRNVRAVSYDPLDRLVYWLDGRQNIRRARDDGAM
SSMIASSSVQPVDNQLHDLSLDPYSRHVYWTCETTNTINIQRMDGHTVGVVLKDDTDKPR
AIVVNAEKGYMYFTTVQERSAKIEGASLDGTERESLFTTGLIRPVALALDIKLGKLFWVD
ADLKRIESSDLTGANRIVLQDSNILQPMGLTVLGDHLYWIDRQQQMIERVDKLTGDGRTR
IQGRISYLTSIHAVEEMDPQEFESHPCSRDNGGCSHICIAKGDGTPRCSCPMHLVLLQDL
LHCGEPPTCSTEQFTCSTGEIDCIPMAWRCDGFPECDDSSDEENCPVCSAFQFQCDKGGC
IDAQRRCNGEPDCADHSDEQECETICPPNQFRCGDNQCITKKQQCDNYSDCPDGSDELAC
EYVSPPSSGIPNTGPNTIGPVIAIILLVFVIGGAYFVCQRVVCRRYKGPSGSFPHEYISG
TPHVPLNFIAPSSSQHGTFQGISCGKSIMSSVSLMGSSSSGAPLYDRNHVTGASSSSSSS
TKGAFYPQILNPPPSPATDRSLYNTEVFYSSNSPSTTRSYRPYHPVRGAAPPTTPCSTDV
CDSDYTPHHPPAGLASSTPCWKAVAHGGHGKHNKYYMDLNSDSDPYPPPPTPRSQYLSAE
ESCPPSPSTERSYFHLCPPPPSPCTDSS
NT seq
4947 nt
NT seq
+upstream
nt +downstream
nt
atgggtctaacgcgcagaggacttgaaatgggcggtctgctggtgctcgtactgctgcgg
agctgcctgctgtcggcggttgacggcacacctctcctcctctttgccaaccggcgtgat
gtgcggctggtagacgcggagggcatacggggtgagtcggccattgttgttagtgacctg
gaggatgcagcagccgtggacttcatgtatgctgagggcctgatattttggacagatgtc
agtgaggaggccatcaaacagacacactggaatcagtcatccaactcccttaaagaggca
ctgggaactggtcagactgtggtagtatcagggctggacagtcctgacgggttggcctgt
gactggttgggtagaaagctctactggacagactcagagaccaatcggattgaagtagcc
aacctggatggcacgtccaggaaggtcctcttttggatggacctggaccagcccagggct
attgctctcaaccctaatcaacgttatatgtactggacagactggggagaggagcccagg
atagaacgtgctggtatggacggcagcaacaggaaagttatcgtggacgtggacatatac
tggcccaacggtctgacgatagacctggtggaacagaagctgtactgggcagacgccaaa
ctcagcttcattcacagagccaacctggatggatcagcacgggaaacagtggtggagggg
accttgacccatccttttgcactaacactgtctgaggagaccttatactggactgactgg
cagactcgctccatccacgcctgtaacaaacacaatggagacaaaaccagagagatcctg
agtgggatttactctcctatggacatccaggtcctggagccgtatcgacagccctacatc
cagactccctgtagtgacaataatggaggctgtagtcatctctgtctactctccccagtc
caaccattttacagctgtgcatgccccaccggagtccagctcaaaccagatggaaagaca
tgcaaaccaggagcagagcaggttttgcttctggctcgacggactgacctgaggagaatc
tcactcgacctgccagatttcactgacattgtgctccaggttgatgacattcgccatgcc
atagctatagactatgacccagttgagggttacgtatattggacagatgatgaggttcgt
gccattcggcgatcccacattgatggcagcaatgccatgatgctggttaccacagagatc
aaccacccagatggcatcgctgtggactgggtggccaggaacctgtactggactgacact
ggcactgaccgcattgaggtcacaaggctcaatggaacttctcgaaaaattttgatttcg
gagaacctggatgagcccagggccatcgtgctggacccggttaatggctacatgtactgg
actgactggggagagcatcccaaaattgagcgggccaaccttaatggaatggaccgggtg
gttctactcaacagctcactgggctggcccaatggactggctatagattacgctgcaggg
aaactatactggggagatgccaaaactgacaagatagaggtgatcaacgtggatggcagt
aacagacagactctgctggaggacaaactgcctcatatctttggctttactctgctcggt
gattacatctactggactgactggcagagacgcagcattgagagggtccacaaagccacg
gcagtacgagagatcatcattgatcagctgccagatttaatggggctgaaagccactaaa
gtgacagaaacatacggtacaaatggctgtgcggtgaataacggcggatgcagccatctg
tgtttctggtgtcgtcaggctgtcagctgtgcctgtcccatgggaatggagcttctctca
gacctgcagacttgtgtggtgccagaggccttcctgctcttcaccaacagggacaacatc
aggagtatctctctgggtaccaacagcaacgatgtggccattcctctgacaggagttaaa
gaggcctctgctctcgactttgacgtgtctgaaagaagaatttactggaccgacatacag
gccaagacaatcagcagagcgtatatgaatggcagctctgtagaacatgtcatagagttt
ggactggactacccagaaggcatggcagttgactggatgggtcgtaacatctactgggct
gatacaggcactaaccgcattgaggtggcccggctggacggccagtaccgtcaggttctg
gtctgtaaggacctcgacaacccgcgctcactggacaacccccgatctttagcactggac
cctgccaatggctacatgtactggacagagtggggtggtcgacctcgtatagctagagca
tacatggatggcagcaccattacgacccttgtggataaagtgggccgggccaacggactg
accatcgactatgtagaccatcgactctactggactgatctggacacgtgtatgatcgaa
agcactaacatgcaaggccttcagagggagataatagtggatgacctccctcaccccttt
ggtctgactcagtaccgggattttatctactggacagactttaacctgcgcagtattgaa
cgggctgacaagcgcagcgggctcaatcgcactgtggtgctgcagggccagctggagctg
atgcttgacatcctggtcttccactcctcccgtcaagagggtaccaacgagtgctcacat
aacaacggcaactgtgcccacctttgcctcgccacacctgctggtgcccagtgccgctgt
gcctcccactacactttgaacactgatggacgaaactgcagctctccctctagtttcctg
ctgttcagtcagaaggccagtattagtaggatggttttgggggagcagagtcctgacatc
atcctgcccatccacgtcttaaggaatgtcagagctgtcagctatgacccattggaccga
ttggtgtactggctggatggacgacagaacatacgcagggccagggatgatggagccatg
tcatccatgattgcaagcagcagtgttcagccagtggacaaccagcttcatgacctgagc
ctggacccctacagccgccatgtgtactggacctgtgagacaaccaacaccatcaacatc
cagaggatggacggacacaccgtgggcgtggtcctgaaggatgacaccgacaagccacgg
gccatcgtggtcaatgctgagaaagggtatatgtatttcaccactgtgcaggagcgctcg
gctaagatcgaaggagccagtctggacgggacagagagagagtctctgttcaccactggt
ctgatcagacctgttgctctagctctggacattaaactgggaaaactgttctgggttgac
gctgacctcaaacgcatcgagagcagtgacctgacaggagccaatcgcatcgtcctccag
gattccaacattcttcagccaatggggctgactgttctgggagatcatctgtactggatc
gaccggcagcagcagatgatagagagggtggacaaactgactggagatggacgtacacgc
atacagggacggatatcatacctgacctccatccacgcggtggaggaaatggatccacag
gagtttgaatcccacccgtgttcccgtgacaatggtggctgctctcatatctgcattgcc
aagggtgacggcacacctcgatgctcctgtcccatgcacctggtgttattgcaggacctg
ctgcactgtggagagcctcccacctgctccacagagcagttcacctgctccacgggggag
atcgactgtattcctatggcatggcgttgtgatggcttccctgaatgtgacgacagcagt
gatgaggagaactgccctgtgtgctcagccttccagttccagtgtgataaaggaggctgc
atcgatgctcagaggcgctgcaatggtgaacctgactgtgctgatcactctgatgagcag
gaatgtgaaaccatctgccctcctaaccagtttcgctgtggtgacaaccaatgcatcacc
aagaaacaacagtgtgacaattactctgactgtcctgatggatctgatgagcttgcctgt
gagtacgtgtctccaccctccagtggcatccctaatactgggcctaacaccattggccca
gtcattgcaatcatcctgcttgtgtttgtgattgggggagcttattttgtctgccagcgt
gtggtgtgtcgacgctacaagggtcctagtgggagttttcctcatgagtacatcagtggt
acgccccatgtgccccttaatttcattgcccccagcagctcacagcatggtaccttccaa
ggtatttcctgtgggaagtccatcatgagctcagtgagcctaatgggcagcagcagcagt
ggagctccgctctatgacaggaaccatgtgactggagcctcatccagcagttcatcatct
accaagggtgccttctaccctcagatcctgaaccctcctccatccccggctactgaccgc
tctctgtacaacacagaggtcttctactcctccaacagtccgtccaccaccagatcctac
agaccctaccacccagtccgtggtgcagccccacctactactccctgcagcactgatgtc
tgcgacagcgactacaccccccatcacccgccggccgggctggcatcgtcaaccccctgc
tggaaggctgtggcccatggcggccatggcaaacacaataagtactacatggaccttaac
tcagactcggacccctaccctccacccccaaccccacgctcccagtacctgtcagctgaa
gagagctgccccccatccccttccacagagcgttcctacttccacctgtgcccccctcct
ccctcgccctgcaccgactcctcgtga
DBGET
integrated database retrieval system
