Larimichthys crocea (large yellow croaker): 104939163
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Entry
104939163 CDS
T04659
Name
(RefSeq) low-density lipoprotein receptor-related protein 5
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04150
mTOR signaling pathway
lco04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
104939163
04150 mTOR signaling pathway
104939163
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104939163
Membrane trafficking [BR:
lco04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
104939163
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
DUF5050
Vgb_lyase
EGF_LRP2
SGL
cEGF
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
104939163
NCBI-ProteinID:
XP_019128832
UniProt:
A0A6G0IZS0
LinkDB
All DBs
Position
Unknown
AA seq
1648 aa
AA seq
DB search
MGLTRRGLEMGGLLVLVLLRSCLLSAVDGTPLLLFANRRDVRLVDAEGIRGESAIVVSDL
EDAAAVDFMYAEGLIFWTDVSEEAIKQTHWNQSSNSLKEALGTGQTVVVSGLDSPDGLAC
DWLGRKLYWTDSETNRIEVANLDGTSRKVLFWMDLDQPRAIALNPNQRYMYWTDWGEEPR
IERAGMDGSNRKVIVDVDIYWPNGLTIDLVEQKLYWADAKLSFIHRANLDGSARETVVEG
TLTHPFALTLSEETLYWTDWQTRSIHACNKHNGDKTREILSGIYSPMDIQVLEPYRQPYI
QTPCSDNNGGCSHLCLLSPVQPFYSCACPTGVQLKPDGKTCKPGAEQVLLLARRTDLRRI
SLDLPDFTDIVLQVDDIRHAIAIDYDPVEGYVYWTDDEVRAIRRSHIDGSNAMMLVTTEI
NHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILISENLDEPRAIVLDPVNGYMYW
TDWGEHPKIERANLNGMDRVVLLNSSLGWPNGLAIDYAAGKLYWGDAKTDKIEVINVDGS
NRQTLLEDKLPHIFGFTLLGDYIYWTDWQRRSIERVHKATAVREIIIDQLPDLMGLKATK
VTETYGTNGCAVNNGGCSHLCFWCRQAVSCACPMGMELLSDLQTCVVPEAFLLFTNRDNI
RSISLGTNSNDVAIPLTGVKEASALDFDVSERRIYWTDIQAKTISRAYMNGSSVEHVIEF
GLDYPEGMAVDWMGRNIYWADTGTNRIEVARLDGQYRQVLVCKDLDNPRSLDNPRSLALD
PANGYMYWTEWGGRPRIARAYMDGSTITTLVDKVGRANGLTIDYVDHRLYWTDLDTCMIE
STNMQGLQREIIVDDLPHPFGLTQYRDFIYWTDFNLRSIERADKRSGLNRTVVLQGQLEL
MLDILVFHSSRQEGTNECSHNNGNCAHLCLATPAGAQCRCASHYTLNTDGRNCSSPSSFL
LFSQKASISRMVLGEQSPDIILPIHVLRNVRAVSYDPLDRLVYWLDGRQNIRRARDDGAM
SSMIASSSVQPVDNQLHDLSLDPYSRHVYWTCETTNTINIQRMDGHTVGVVLKDDTDKPR
AIVVNAEKGYMYFTTVQERSAKIEGASLDGTERESLFTTGLIRPVALALDIKLGKLFWVD
ADLKRIESSDLTGANRIVLQDSNILQPMGLTVLGDHLYWIDRQQQMIERVDKLTGDGRTR
IQGRISYLTSIHAVEEMDPQEFESHPCSRDNGGCSHICIAKGDGTPRCSCPMHLVLLQDL
LHCGEPPTCSTEQFTCSTGEIDCIPMAWRCDGFPECDDSSDEENCPVCSAFQFQCDKGGC
IDAQRRCNGEPDCADHSDEQECETICPPNQFRCGDNQCITKKQQCDNYSDCPDGSDELAC
EYVSPPSSGIPNTGPNTIGPVIAIILLVFVIGGAYFVCQRVVCRRYKGPSGSFPHEYISG
TPHVPLNFIAPSSSQHGTFQGISCGKSIMSSVSLMGSSSSGAPLYDRNHVTGASSSSSSS
TKGAFYPQILNPPPSPATDRSLYNTEVFYSSNSPSTTRSYRPYHPVRGAAPPTTPCSTDV
CDSDYTPHHPPAGLASSTPCWKAVAHGGHGKHNKYYMDLNSDSDPYPPPPTPRSQYLSAE
ESCPPSPSTERSYFHLCPPPPSPCTDSS
NT seq
4947 nt
NT seq
+upstream
nt +downstream
nt
atgggtctaacgcgcagaggacttgaaatgggcggtctgctggtgctcgtactgctgcgg
agctgcctgctgtcggcggttgacggcacacctctcctcctctttgccaaccggcgtgat
gtgcggctggtagacgcggagggcatacggggtgagtcggccattgttgttagtgacctg
gaggatgcagcagccgtggacttcatgtatgctgagggcctgatattttggacagatgtc
agtgaggaggccatcaaacagacacactggaatcagtcatccaactcccttaaagaggca
ctgggaactggtcagactgtggtagtatcagggctggacagtcctgacgggttggcctgt
gactggttgggtagaaagctctactggacagactcagagaccaatcggattgaagtagcc
aacctggatggcacgtccaggaaggtcctcttttggatggacctggaccagcccagggct
attgctctcaaccctaatcaacgttatatgtactggacagactggggagaggagcccagg
atagaacgtgctggtatggacggcagcaacaggaaagttatcgtggacgtggacatatac
tggcccaacggtctgacgatagacctggtggaacagaagctgtactgggcagacgccaaa
ctcagcttcattcacagagccaacctggatggatcagcacgggaaacagtggtggagggg
accttgacccatccttttgcactaacactgtctgaggagaccttatactggactgactgg
cagactcgctccatccacgcctgtaacaaacacaatggagacaaaaccagagagatcctg
agtgggatttactctcctatggacatccaggtcctggagccgtatcgacagccctacatc
cagactccctgtagtgacaataatggaggctgtagtcatctctgtctactctccccagtc
caaccattttacagctgtgcatgccccaccggagtccagctcaaaccagatggaaagaca
tgcaaaccaggagcagagcaggttttgcttctggctcgacggactgacctgaggagaatc
tcactcgacctgccagatttcactgacattgtgctccaggttgatgacattcgccatgcc
atagctatagactatgacccagttgagggttacgtatattggacagatgatgaggttcgt
gccattcggcgatcccacattgatggcagcaatgccatgatgctggttaccacagagatc
aaccacccagatggcatcgctgtggactgggtggccaggaacctgtactggactgacact
ggcactgaccgcattgaggtcacaaggctcaatggaacttctcgaaaaattttgatttcg
gagaacctggatgagcccagggccatcgtgctggacccggttaatggctacatgtactgg
actgactggggagagcatcccaaaattgagcgggccaaccttaatggaatggaccgggtg
gttctactcaacagctcactgggctggcccaatggactggctatagattacgctgcaggg
aaactatactggggagatgccaaaactgacaagatagaggtgatcaacgtggatggcagt
aacagacagactctgctggaggacaaactgcctcatatctttggctttactctgctcggt
gattacatctactggactgactggcagagacgcagcattgagagggtccacaaagccacg
gcagtacgagagatcatcattgatcagctgccagatttaatggggctgaaagccactaaa
gtgacagaaacatacggtacaaatggctgtgcggtgaataacggcggatgcagccatctg
tgtttctggtgtcgtcaggctgtcagctgtgcctgtcccatgggaatggagcttctctca
gacctgcagacttgtgtggtgccagaggccttcctgctcttcaccaacagggacaacatc
aggagtatctctctgggtaccaacagcaacgatgtggccattcctctgacaggagttaaa
gaggcctctgctctcgactttgacgtgtctgaaagaagaatttactggaccgacatacag
gccaagacaatcagcagagcgtatatgaatggcagctctgtagaacatgtcatagagttt
ggactggactacccagaaggcatggcagttgactggatgggtcgtaacatctactgggct
gatacaggcactaaccgcattgaggtggcccggctggacggccagtaccgtcaggttctg
gtctgtaaggacctcgacaacccgcgctcactggacaacccccgatctttagcactggac
cctgccaatggctacatgtactggacagagtggggtggtcgacctcgtatagctagagca
tacatggatggcagcaccattacgacccttgtggataaagtgggccgggccaacggactg
accatcgactatgtagaccatcgactctactggactgatctggacacgtgtatgatcgaa
agcactaacatgcaaggccttcagagggagataatagtggatgacctccctcaccccttt
ggtctgactcagtaccgggattttatctactggacagactttaacctgcgcagtattgaa
cgggctgacaagcgcagcgggctcaatcgcactgtggtgctgcagggccagctggagctg
atgcttgacatcctggtcttccactcctcccgtcaagagggtaccaacgagtgctcacat
aacaacggcaactgtgcccacctttgcctcgccacacctgctggtgcccagtgccgctgt
gcctcccactacactttgaacactgatggacgaaactgcagctctccctctagtttcctg
ctgttcagtcagaaggccagtattagtaggatggttttgggggagcagagtcctgacatc
atcctgcccatccacgtcttaaggaatgtcagagctgtcagctatgacccattggaccga
ttggtgtactggctggatggacgacagaacatacgcagggccagggatgatggagccatg
tcatccatgattgcaagcagcagtgttcagccagtggacaaccagcttcatgacctgagc
ctggacccctacagccgccatgtgtactggacctgtgagacaaccaacaccatcaacatc
cagaggatggacggacacaccgtgggcgtggtcctgaaggatgacaccgacaagccacgg
gccatcgtggtcaatgctgagaaagggtatatgtatttcaccactgtgcaggagcgctcg
gctaagatcgaaggagccagtctggacgggacagagagagagtctctgttcaccactggt
ctgatcagacctgttgctctagctctggacattaaactgggaaaactgttctgggttgac
gctgacctcaaacgcatcgagagcagtgacctgacaggagccaatcgcatcgtcctccag
gattccaacattcttcagccaatggggctgactgttctgggagatcatctgtactggatc
gaccggcagcagcagatgatagagagggtggacaaactgactggagatggacgtacacgc
atacagggacggatatcatacctgacctccatccacgcggtggaggaaatggatccacag
gagtttgaatcccacccgtgttcccgtgacaatggtggctgctctcatatctgcattgcc
aagggtgacggcacacctcgatgctcctgtcccatgcacctggtgttattgcaggacctg
ctgcactgtggagagcctcccacctgctccacagagcagttcacctgctccacgggggag
atcgactgtattcctatggcatggcgttgtgatggcttccctgaatgtgacgacagcagt
gatgaggagaactgccctgtgtgctcagccttccagttccagtgtgataaaggaggctgc
atcgatgctcagaggcgctgcaatggtgaacctgactgtgctgatcactctgatgagcag
gaatgtgaaaccatctgccctcctaaccagtttcgctgtggtgacaaccaatgcatcacc
aagaaacaacagtgtgacaattactctgactgtcctgatggatctgatgagcttgcctgt
gagtacgtgtctccaccctccagtggcatccctaatactgggcctaacaccattggccca
gtcattgcaatcatcctgcttgtgtttgtgattgggggagcttattttgtctgccagcgt
gtggtgtgtcgacgctacaagggtcctagtgggagttttcctcatgagtacatcagtggt
acgccccatgtgccccttaatttcattgcccccagcagctcacagcatggtaccttccaa
ggtatttcctgtgggaagtccatcatgagctcagtgagcctaatgggcagcagcagcagt
ggagctccgctctatgacaggaaccatgtgactggagcctcatccagcagttcatcatct
accaagggtgccttctaccctcagatcctgaaccctcctccatccccggctactgaccgc
tctctgtacaacacagaggtcttctactcctccaacagtccgtccaccaccagatcctac
agaccctaccacccagtccgtggtgcagccccacctactactccctgcagcactgatgtc
tgcgacagcgactacaccccccatcacccgccggccgggctggcatcgtcaaccccctgc
tggaaggctgtggcccatggcggccatggcaaacacaataagtactacatggaccttaac
tcagactcggacccctaccctccacccccaaccccacgctcccagtacctgtcagctgaa
gagagctgccccccatccccttccacagagcgttcctacttccacctgtgcccccctcct
ccctcgccctgcaccgactcctcgtga
DBGET
integrated database retrieval system
