Larimichthys crocea (large yellow croaker): 104939164
Help
Entry
104939164 CDS
T04659
Symbol
rnf31
Name
(RefSeq) E3 ubiquitin-protein ligase RNF31
KO
K11974
E3 ubiquitin-protein ligase RNF31 [EC:
2.3.2.31
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04217
Necroptosis
lco04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
104939164 (rnf31)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
104939164 (rnf31)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lco04121
]
104939164 (rnf31)
Enzymes [BR:
lco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
104939164 (rnf31)
Ubiquitin system [BR:
lco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
104939164 (rnf31)
Multi subunit Ring-finger type E3
LUBAC complex
104939164 (rnf31)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HOIP-UBA
E3_UbLigase_RBR
PUB
IBR
zf-RanBP
Motif
Other DBs
NCBI-GeneID:
104939164
NCBI-ProteinID:
XP_019110054
LinkDB
All DBs
Position
XXIII:2377528..2389169
Genome browser
AA seq
1104 aa
AA seq
DB search
MSGGPASVQMDEVRRRSLSLLSSSGNAQDVKAEVQTMAGIPLPLSEKYRQFGVEAMLREN
TAGRNRQEVLESLSRLVKALSILEKYGCNLTSPTRPRYWRSVKHNNPVFRTTVDAIKGGR
RVLYLYGYTNQQVDGLSFPDEVTEPDAEKVAAVTLEVMTLRTEVDMLIKGTHPHLEHFQD
VIPFITQQEKPVSDSADEQPVDKPEVLSPLPKPAQPLKPSTGSPVASDCNLCGGPSSLVC
PSCDNQPLCDACDDLFHRHPSRANHKRDKIHKTKPETCSICGISSVHAQCSTCVQRLCRK
CDLLFHSHPDRKGHNRTNITPAKTSSPSLSPWECSHCTTVNEMRAVLCATCERPRLATAA
SNVQESLMSVPTSPNTEWQCKSCTVVNQGSSILCEVCERPRLATRPPVAPVLSSPGSLSD
SGTKWMCQFCTYVNTKPALVCEMCNLSGKDSPTGVSLPLSLQQTPSSTKDQSQPVTRPQP
KPRLNTDLRRQKTMREDGLALIHQIREAEKCGISPEEVYAAILCSSSNNTKPCDWVTSEL
PHLLDEICAMAASVQLNYKAGDCGIQPTVVRDGEEPEQSVPGEGVKLSRAEAKLAWLAAG
GDTDRAVKQLLRDRQHKMKELHSLGFRDSSQSEEALRLSGGEVKGALSLLQRPLLEPFHQ
RIWTDQPEPPIDPKNPDKQRMCRRLLALYDLPSWGRCELVLSLLQEPDVTYSLEDVVQAA
KESHDKDFIRRLLNNECPCCFSIFPRSKMQSLTSCQCSVCHECFAMHFTVAVRDKHIRDM
VCPVCREPDINDPEQLDSYFSTLAIQLHECLEPDVYDLFHKKLTEHALMKDPKFLWCCHC
TSGFINEINENQLKVTCLSCHKSFCAQCKKPWESQHQVLSCEQFQQWKRDNDPEYQRQGL
AGYLRDNGITCPHCRFQYALTKGGCMHFSCSQCRYQFCSGCNNSYHKTACKTPPCSYTGL
HAHHPRDCLFYLRDWEPARLQELLKMKGVEFNTDPSAGTQTDSCRVMEQKDEEGLQVDSP
CGIQTKPGQAGLCEKHYREYLVSLINAHSLDPALLYDAHELTRACERYQVDTQRGENEED
DAYHARQLKKLMEVPLGEKVPRNK
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcggccctgcctccgtccagatggacgaggtcaggaggagatccctgtccctc
ctgtcctcgtcaggtaatgcccaggacgtgaaagctgaagtccagaccatggccggcatc
cctctgcctctgtcggagaagtaccgtcagtttggagtggaggccatgctgagggagaac
acggccggacgcaacagacaggaggttctggagtctttgagtagactggtcaaggccttg
agtatcctggagaagtacggctgcaacctgacgagtcccaccaggcccagatactggagg
agcgtcaagcacaacaaccccgtcttcaggacgacggtggatgccatcaagggaggccgg
agagtcctctacctgtacggttacaccaatcagcaggtcgatggcctcagtttccccgat
gaagtcaccgaaccagacgcggaaaaagttgctgcagtgacgctggaggtcatgacctta
cgcacagaggtggacatgctcatcaagggcactcatcctcacctagaacacttccaagat
gtcatcccatttatcacccagcaggagaaaccggtgagtgactctgcagacgagcagccg
gtagacaaacccgaagtcctgtctcctctacctaaacccgctcaacctctgaaaccttcg
acaggctctcctgtagcgagtgactgtaacttgtgtggcggtccctcgtccctcgtttgc
ccgtcctgcgacaatcagcctctctgtgacgcatgcgatgacctctttcaccgccacccg
tccagagccaatcacaagagagataaaatccataaaaccaaaccagaaacctgcagcatc
tgcgggatttcctccgttcacgctcagtgctccacgtgcgtccagaggttgtgtcggaaa
tgtgacctgcttttccactctcaccccgaccgcaaaggacacaacagaaccaatatcaca
ccagctaaaacatccagtccgtctctgtcgccctgggagtgctctcattgcaccacagtg
aacgagatgcgagccgtcctctgcgcgacctgcgagcggcctcgactcgctacggcagcc
tccaacgttcaagaaagcctgatgtcggttcctacgtctcccaacacggagtggcagtgt
aagagctgcacagttgtgaatcaaggcagcagcatcctctgtgaggtgtgtgagcgccct
cgtctggccactcgcccgcccgtcgctccggttctgtccagcccaggatctctgtccgac
tctgggacaaagtggatgtgtcagttctgcacctacgtaaacaccaagccggctctggtg
tgtgagatgtgcaacctgtcaggtaaagactctcccaccggagtttctctgcccctgtcc
ctccagcagactccgtccagcaccaaagatcaatcgcagccggtcacgaggccccaaccg
aagccgagactcaacacggatctgagaaggcagaagacgatgagggaagacggcctcgct
ctcatccaccagatcagagaagcagaaaagtgcggcatcagtcctgaggaggtgtatgcg
gccatcctgtgctccagcagcaacaacactaaaccgtgcgactgggtgacgtcggagctg
cctcacctgctggatgaaatctgcgccatggcggcttccgtccagctaaactacaaagcg
ggggattgtgggatacaacccacggtggtgagggacggagaggagccggagcagagcgtc
cccggtgaaggcgtgaagctgtccagagccgaggccaagctggcctggctggcagccgga
ggagacacagaccgagcggtgaaacagctgctgagagaccgacagcacaagatgaaggag
ctccactctctgggcttcagggactcgtctcagtctgaggaggccctgcggctaagcggc
ggcgaggtgaagggcgccctgtctctgctgcagcgccccctcctggagcctttccaccag
cgtatttggaccgaccagcccgagccgccgattgatcccaaaaatccagacaaacagagg
atgtgcaggcgtctgctggcgctgtacgacctgcccagctggggccgctgcgagctcgtc
ctctcgttgcttcaagaaccggacgtcacctactcgctggaggacgtcgtgcaagccgcg
aaggagtcgcacgacaaagatttcatccgccgtctcctcaacaacgagtgcccctgctgt
ttcagcatcttcccccgcagcaagatgcagtctctgacttcatgtcagtgctccgtgtgc
cacgagtgcttcgcgatgcacttcaccgtcgccgtgagagacaaacacatcagagacatg
gtgtgtcccgtctgcagagagccggacatcaacgaccccgaacaactggacagctacttt
tctacgctggccatacagctgcatgaatgcctggagccggacgtgtacgacctgtttcat
aaaaagctgacggagcacgccctgatgaaagacccgaagttcctgtggtgctgtcactgc
acgtctggattcatcaacgaaatcaatgaaaaccagctgaaggtcacctgcctgtcctgc
cacaagagtttctgcgctcagtgtaagaaaccttgggagtctcagcaccaggttctgtcc
tgtgagcagttccagcagtggaagagggacaacgaccccgagtaccagaggcaaggcctg
gccggctacctgagggacaacggcatcacctgtcctcactgcaggttccagtacgctctg
accaaaggcggctgcatgcacttcagctgctcccagtgccggtaccagttctgcagcggc
tgcaacaactcgtaccacaagacggcgtgtaagacgcctccgtgcagttacaccggtcta
catgctcatcatccacgtgactgtctcttctatctcagagactgggagccggccagactg
caggaactgctcaagatgaagggcgtggagttcaacacagatccttcggctggaactcaa
acggactcttgtcgtgtgatggagcagaaagacgaggaaggcctgcaggtcgattcgccg
tgtggcatccagacgaagccgggacaagccggactctgcgagaagcactacagggagtac
ctggtgagtctgataaacgctcactctttggacccggctctgctctacgacgcccacgag
ctgacccgggcctgcgagagataccaggtggacacgcagagaggcgagaacgaggaggac
gacgcctaccacgctcgacagctcaagaaactgatggaggttcctcttggagagaaagtt
cctcgaaacaaataa
DBGET
integrated database retrieval system
