Larimichthys crocea (large yellow croaker): 104939207
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Entry
104939207 CDS
T04659
Symbol
usp16
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
104939207 (usp16)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lco01002
]
104939207 (usp16)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lco04121
]
104939207 (usp16)
Enzymes [BR:
lco01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104939207 (usp16)
Peptidases and inhibitors [BR:
lco01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104939207 (usp16)
Ubiquitin system [BR:
lco04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104939207 (usp16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
CAF-1_p60_C
SAC9_C8D
Motif
Other DBs
NCBI-GeneID:
104939207
NCBI-ProteinID:
XP_027136278
LinkDB
All DBs
Position
VII:22545052..22552105
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AA seq
849 aa
AA seq
DB search
MGKKRGKDRRQEEEDIDLTGPSCRHIKKGTDQTLLKKLSGVSDWLSCQVCENEENKENIG
AAMQQDSEEEQQAVWMCLKCGHRGCGRNSENQHAIKHYETPRSDPHCLVISLDNWSVWCY
ICDDEVQYSRTGHLAQLVTSLKKQTSADPIKRPQKRVKEEDSLLEVEEKIEPVKAEENED
KKECKENKDQKKNSKKDSVGKSQKSGTSGDNGGVSVKGLSNLGNTCFFNAVIQSLSQTQL
LRQTLNKVTEEKMSLDITPVASSDLEPVVVQLDQPGSLTLSMCQLLNEIQETKKGVVTPR
ELFTQVCKKAARFKGFQQQDSQELLRYLLDGMRAEEIKRVSSGIMQTLKESRKGTDGEQL
KTLVKEYEKNGTPKNFVDHVFGGEMTSTVMCQQCKTVSVVTEMFLDLSLPVSDEAYRKKN
QKKVVQKSTSESSQDGRNSPALTNGVDDIPTVAGSKYQQKKAKKQAKKQAKQQKRQQKLE
GRVTLDSLTSPSHTESEQTDLTAEAKDGENADNEMHEEAPPSEENPAQISVSEEGHKNLD
AAEDEKEKEEDEDSVIDCDSSTTSSVSNRFNVLSEERQSKDSIIDDDKTSDVDQDGEDDT
QLVSEMEKVTLDDAFVEDPDAVGQATTSEDEPEAKEYTVVSQDPELAFHTLATRTAPEKQ
ECSVQSCLFQFTEVETLTQNNSLLCVTCTKRQPNKDKAAGSKKNVYTDALKQMLISSLPP
VLTLHLKRFQQNGYSICKVNRHVQFPLILDLAPFCGVKCKNVTEGDAQILYSLYGIVEHS
GTMRSGHYTAYVKVRPECPKPSSNGHAAEGDAGQPRGSWFHISDTSVQPVSESKVQSCQA
YLLFYERIL
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagaaaagaggcaaggacaggagacaggaggaagaggacattgacctgacaggt
ccatcgtgcagacatatcaagaagggcacagaccagactcttctgaagaaactctccggg
gtttctgattggctgagctgccaggtttgcgagaatgaagagaataaagaaaacatcggc
gccgccatgcaacaggactccgaggaagagcaacaagctgtgtggatgtgcttgaaatgt
ggccatagaggatgtggacgaaactctgagaaccagcatgccatcaaacattatgagact
ccccggtcagatccacattgcctggtgatcagtttggacaactggagtgtgtggtgttat
atatgtgacgatgaagtccagtactcaagaacaggacatttggctcagctggtgaccagc
ctaaaaaaacaaacctctgcagatcccataaagagaccacagaaaagagtgaaggaggaa
gacagcttgttggaggttgaggagaagatagagccagtaaaagcagaggaaaacgaggac
aagaaggaatgcaaagaaaacaaggaccaaaagaaaaattccaagaaagatagtgttggg
aaatcacaaaagtctggcacatctggagacaatggtggcgtgtcagtaaaggggctgagc
aacctgggaaacacatgtttctttaatgcagtcatccagagtctctctcagacacagctc
ttaagacagactctcaacaaagtgacagaagagaaaatgagtcttgacattacgcccgtc
gcctcctcagatctggagcctgttgtggtacagttggaccagccgggatctctgactttg
tctatgtgtcaactattgaatgagatccaggaaaccaagaagggtgtggtaacaccgcgg
gagttgttcacacaagtttgtaaaaaagctgcaaggttcaaaggatttcaacagcaagat
agccaggaactactgcgctatcttcttgatgggatgcgagctgaggagattaaaagagta
agctcagggatcatgcagacgttgaaagaatccagaaaaggcacagatggagagcagctg
aaaacactagttaaagagtatgagaaaaatggaactccgaaaaactttgtcgaccacgta
tttgggggagaaatgaccagcactgtaatgtgtcagcagtgtaaaacggtgtctgtagtc
acagagatgtttttggatctttctcttcctgtttctgatgaggcatatagaaagaagaac
cagaaaaaagtagttcaaaagagcaccagcgagtcaagccaggacggtagaaacagccct
gctttgaccaacggtgttgatgacattcccaccgtggctggcagcaagtaccagcagaag
aaagcgaagaagcaggcaaagaagcaagcaaagcagcaaaaaaggcagcaaaagcttgag
ggcagagtcactttagacagcctcacatctccaagccacacagaaagtgaacagacagat
cttactgcggaggcaaaggacggggaaaatgctgataatgaaatgcatgaagaagcccca
ccgagtgaagaaaatccagcacaaatcagcgtgtctgaagagggccataagaatcttgac
gcagccgaggatgagaaagaaaaagaagaggacgaggattcagtgattgactgtgactca
tcgactacgtcatcagtgagcaaccgtttcaacgtcttatcagaggagcggcagtcaaag
gacagcatcatagacgatgacaaaacatccgacgtggatcaggatggtgaagacgacaca
cagctggtgagtgaaatggagaaagtgaccctggacgatgccttcgtagaagaccctgat
gctgtgggacaagccacgacgagtgaagatgaaccggaggctaaagagtacaccgtagta
agtcaggacccagagctggccttccatacgctggcaacgaggacggcccctgagaaacag
gagtgttcagtgcagtcgtgcctctttcagttcacagaagtggaaaccctcacgcagaac
aacagcctgctttgtgtcacctgcactaaacggcagccaaacaaagacaaagctgcagga
tccaagaagaatgtctacaccgatgccttaaagcagatgctgatctcgtcgctcccacca
gtgctcactctacatttgaagagatttcagcagaatggatacagcatttgtaaggtgaac
agacatgtccagttccccctgatactggatctagctcctttctgtggggttaaatgcaag
aatgtgacggagggagatgctcagattttgtacagtttgtacggcatcgtagagcacagt
ggaacaatgaggtccggtcattacacagcctatgtgaaagtacgacccgagtgccctaaa
ccctcatccaatgggcatgcagcagaaggggacgcggggcaacccagaggatcctggttc
catatcagcgacacaagcgttcagcccgtgagcgagagcaaagtccagagttgccaagcc
tacctcctcttctacgaaagaatcctctaa
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