Larimichthys crocea (large yellow croaker): 104939315
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Entry
104939315 CDS
T04659
Symbol
trpc4ap
Name
(RefSeq) short transient receptor potential channel 4-associated protein isoform X1
KO
K11796
Trpc4-associated protein
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lco01009
]
104939315 (trpc4ap)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lco04121
]
104939315 (trpc4ap)
Protein phosphatases and associated proteins [BR:
lco01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104939315 (trpc4ap)
Ubiquitin system [BR:
lco04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
104939315 (trpc4ap)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3689
Translin
Motif
Other DBs
NCBI-GeneID:
104939315
NCBI-ProteinID:
XP_010754141
UniProt:
A0A6G0J343
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Position
VI:5331449..5340369
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AA seq
774 aa
AA seq
DB search
MATLLGSESPCTGGKRRNCTSNIVTKFTASKITGQGFSRGTQLPGGLLQERDKRAKWHGI
PTLLQKLYESSHPNSDLSHAHSFLKVLSSQLSMEAMSFVTEDRKTAQESTFPNTYTFDLF
GGVDLLVEILMRPTLTMQKKKPKMNDDLVKDCLSVLYNCCICTEGVTKSLAARDDFVLFL
FTLMTNKKTFLQTATLIEDILGVKKEMIQLEGIPNLSGLVQSFDQQQLANFCRILSVTIS
EPDVGNDDKHTLLAKNAQQKRNASPSRAEVNQVTLLNIPGFIERLCKLATRKVSEATGAN
FLQELEDWYTWLDNALVLDALMQMATEEAEQSSTESSDESSLATSPLRHRLPQSMKIVHE
IMYKVEVLYVLCVLLMGRQRNQVHKMLAEFRLIPGLNNLFDKLIWRKYTASNHVVHGQNE
NCDCSPEISFKIQFLRLLQSFSDHHENKYLLLNSQELNELSAISMKANIPEVEALVNTDR
SLVCDGKKGLLTRILTVMKREPPDSSFRFWQARAVESFLRGATSYADQMFLLKRGLLEHI
LFCIIDSGCTSRDVLQSYFDLLGELMKFNIDAFKRFNKYVNTPEKFQTFLTQINSSLVDS
NMLVRCIVLSLDRFESQTEDVKVVEVLSECCLLSYMARVENRLSFLFRLINIINVQTLTQ
ENVSCLNTSLVILMLARRKAKLPFYLNALREKEYAEKYPGCLLNNFHNLLRFWQRHYLNK
DKDSTCLENSSCIPFSYWKETVSVLLGSDRTSLCAIASYIDEPFMDLDRDLLED
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgcttttggggtccgagtccccttgtactggaggaaaacgaagaaattgcacc
agcaatatcgtcacaaagttcacggccagtaaaatcactggtcagggtttcagtcgaggg
acgcagctcccaggaggcctgctccaggagagagataaaagggccaagtggcatggcatc
cctacactgctgcagaagctctatgagagcagccatcctaacagtgacctctcccatgcc
catagctttcttaaggtattatcatcccagctctccatggaggccatgtcttttgtcaca
gaggacaggaagaccgctcaggaatccacctttcccaacacgtacacctttgacctcttt
ggtggagtcgatctgcttgtggaaatcttgatgaggcccacgttaactatgcagaagaaa
aaacctaaaatgaatgatgacttggtcaaggactgccttagtgttctctacaactgttgt
atatgtacggagggggtcacaaagagcctggcagcgagggatgactttgttctgtttctc
ttcaccctgatgacaaacaagaagaccttcctacagaccgctacacttattgaagatatt
cttggagtcaaaaaggagatgattcagttagagggcatccccaacctgtcaggcctggtc
caaagctttgaccaacaacagctagccaacttctgccgcatcctgtctgtcaccatctca
gaaccagatgttggaaatgatgataagcacaccctgttggccaaaaatgcacagcagaaa
cgcaatgctagcccctcacgggcagaggtcaaccaggtgaccctgctgaacatccctggc
ttcattgagcggttgtgtaagctggccactaggaaggtgtctgaggccacgggagctaac
ttcctgcaggagctggaggactggtacacctggctggacaatgctctcgtgctggatgcc
ctcatgcagatggccactgaggaggctgagcaaagcagcacagaatcatcagatgagagt
tcacttgccaccagccctctgagacatcgactgcctcagtctatgaagatcgtccatgag
atcatgtataaagttgaagtgctctatgtgctgtgtgtccttcttatgggccgacagagg
aaccaggtgcacaagatgctggctgagttccggctcatcccggggctcaacaacctgttt
gacaagctgatctggagaaaatacacggcttcaaatcatgtggtgcatggccagaatgag
aattgcgactgtagtccagaaatatcctttaaaatccaatttctgcggctacttcagagt
ttcagcgatcatcacgagaacaaatacctcctgctgaatagccaggagctgaatgaactg
agtgccatatccatgaaggctaacatccccgaggtggaagctttggtcaacacagataga
agcctagtgtgtgatgggaagaagggtctccttacacgcatcctcactgtcatgaagagg
gagcctccagactcgtcgttcagattctggcaggcaagggcagtggaaagttttctcaga
ggagccacctcctatgcagaccaaatgttcctcctgaagaggggactactagagcacatc
ctgttctgcatcatagacagcggctgtacatctcgcgatgtcctacagagctactttgat
ctgcttggagagctcatgaagttcaacatcgatgccttcaaaagattcaacaaatatgtt
aacactccagagaagtttcagaccttcctgacgcagatcaacagttctcttgtggactct
aacatgttggtgcgctgcatcgtcctttcattggaccgctttgagagccagactgaagac
gtcaaagtggtcgaggtactttctgagtgctgcctgttgtcttacatggccagagttgag
aacaggctgtccttcctctttcgactgatcaacatcatcaacgtacagacgctcacacag
gagaacgtgagctgtttaaacaccagtttggtgatcttgatgctggccagaagaaaggct
aaactgcccttctacctcaacgccctgcgggagaaggagtatgcagagaagtacccgggc
tgcctgctcaacaactttcacaacctactacgcttctggcagcgccactacctcaacaag
gacaaagacagcacctgtctggagaatagctcctgtatccctttcagctactggaaggag
acggtgtcagtgctgctgggctcagacaggacttctctgtgtgccatagcgagctacatt
gatgagcccttcatggatctggacagagacctgctggaagattga
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