Larimichthys crocea (large yellow croaker): 104939324
Help
Entry
104939324 CDS
T04659
Name
(RefSeq) neurofascin
KO
K06757
neurofascin
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
104939324
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lco04515
]
104939324
Cell adhesion molecules [BR:
lco04515
]
Immunoglobulin superfamily
L1 family
104939324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Ig_6
Pur_ac_phosph_N
Adeno_E3_CR1
BiPBP_C
Motif
Other DBs
NCBI-GeneID:
104939324
NCBI-ProteinID:
XP_019112751
LinkDB
All DBs
Position
XV:8557997..8574383
Genome browser
AA seq
1179 aa
AA seq
DB search
MGTLVEPALLLLLWQSVWALDIPLEVRQPPTIIKQSVKDHIVDPKDTMVIECEAKGNPHP
IFSWRRNGKYFNVARDSQASMRRRSGTLDIYAKNNPEQYEAEYQCIASNEYGSAYSNKIR
LRLYRAPVWPREILEPVVISAGLPLVLSCDPPPGPPKPETYWMSSCSYARPFNWPIQTAF
PTMQPVRQDRRVSMGVNGDLYFSNVLFNDSATDYCCNARFPYKNVIQQKMPVVVKVLTTR
TVAEAAPSWLSPTGSSSSILVLQGEELLLECIAAGVPTPHISWTKDGDDLVVRPRMRVKN
FNKMIQIPRASFDDAGEYVCSATNKIGYIEHTITVRVKAAPFWLEKPADLVLAPEENGRL
VCRSDGVPRPTISWFLNGEPIETATPLPNRQVSGDTLTLRSVTIENNGVYQCNASNPFGY
LLANAFVNVLHATPRILGPRNELNKVTEGTNVFLHCRFFGSPVPELRWSKYGQGNLEGNR
FKTYSNGTLEIKRIRIEDQGTYLCIVSNVAGRDESQVRIEVKEPTLIVTKPQSLKVIRGT
DVRFECGVKADVTTPVTTTWLKGKKPVTLGWRITMDESNLVITNVNRDDEGNYTCVIKSE
LDQKSASARLLVMDRPDPPTNLELSDPYERSVRLSWAPGDNNHNPISEYLVQYDDDDWLP
GKWKNLSTYAGNLNSVILHLTPFTYYEFRVIAINEIGMSRPSRPSKRFQSSGAPPDVIPK
NLKGVGTWRNNMEISWEPLTYREWNGPHLKYLVWWRRRDSREEWKNATTKWLKYYIYDAD
TFTPYEIKVQAVNDFGLGPESPVVTGYSGEDRPLSAPLNLRVSDIESTQATLHWDTVERG
SIMGELKEYKIYYWRDSSQLRWHRVNRGMKSKTFPNDDPEPSGVLTGLIPYSNYKMYIVV
ANNRYEGPPSNNIHFSTPEGVPSVPKSFRIQQRHLDSIYVDWDLPAEPNGIITGYSLKYQ
TVNATRGEELRVEEFLPNVTSFSVRRYDRYTRYRFSVAARTRIGIGEWHTEESPHYTTEI
YAQDQVDISTQGWFIGIMCAVALIVLILLIVCFIKRSRGGKYPVREKKDISLEPVDDKDQ
EGSFDYRSLERIARVSTLPYPRREEERGLQRGQPSMEAMMKRSDSDDSLVDYGEGGEIPF
NEDGSFIGQYTGTRRDVRDLDFGGSLELHSPMNTIYSLA
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atggggacactggtcgaaccagcgctgctgctacttttatggcagagtgtttgggctttg
gacatccctctggaagtcaggcagcccccaaccatcataaaacagtcagtaaaagaccat
attgttgaccccaaagacaccatggtcattgaatgtgaagccaaaggaaaccctcatccc
attttctcatggaggcgtaatgggaagtatttcaacgtggcacgtgactctcaagcatcg
atgcgcaggcgctcagggacactggacatctatgccaagaacaatccagaacaatatgag
gcagagtatcagtgcatcgcctccaatgagtatggatctgcatactccaacaagatcaga
ctacgactatacagagcgcctgtgtggccgagggagattctggagcctgtggtgatcagc
gctggcctgcctctagtcctgtcctgtgaccctccacctggcccacctaaacctgaaacc
tactggatgtccagctgctcatatgcgagaccgttcaactggcccattcagacagctttc
cccaccatgcagcctgtgcggcaggaccgcagggtatccatgggagtaaatggagatctg
tacttctctaacgtcctgttcaatgactctgcgactgactactgttgtaacgcccgtttc
ccctacaaaaatgtcatccagcagaagatgcctgtggttgttaaagtgcttacaactcgc
acagtggccgaggctgcccccagctggctgtctcccacagggtcgtccagctccatactg
gtcctgcaaggggaagaactgctcttggagtgcattgctgcaggagtgccaactcctcat
atcagctggaccaaagatggcgacgacctggtggtgaggccacgcatgagagtaaagaac
ttcaacaagatgattcaaatcccgagagcatcttttgatgacgcgggtgaatacgtctgc
agtgctaccaataaaattggatacattgagcacacgataactgtcagggtcaaagcggct
ccattctggttggagaagcctgctgatctagttttggcccctgaggaaaatggacgcttg
gtatgtcgttctgatggtgttcctcgtcccacaatcagctggttcctcaacggggaacca
attgaaactgccactccgctgcctaacagacaggtgtcaggagacacgttgactttacgc
agtgtgaccattgaaaacaatggcgtctatcagtgcaacgcttccaatccatttgggtac
ttattggccaatgcttttgtcaacgtgctgcatgcaactccacgcattctcggacccagg
aatgaacttaataaggtgacggagggcactaatgttttccttcactgccgcttctttgga
tccccagtgcctgaattgcgatggtccaaatatggacaggggaatcttgaaggaaatcgt
tttaagacctacagtaacgggactctggaaataaaacgcatacggatagaggaccaggga
acgtacctgtgcatagtcagcaacgtcgcaggaagagatgagagtcaagttcgaatagag
gtcaaagagccgactttaatcgtcacaaaaccgcaaagtttgaaagtcatccgtggaacc
gatgtgcgcttcgagtgtggcgtaaaagcagatgttacaactcctgtcacgaccacctgg
ctgaaaggcaaaaagcctgtcactcttggctggagaatcaccatggatgaatcaaatttg
gtcatcactaatgtaaacagagacgatgagggcaattatacttgtgtcatcaagagtgaa
ctggaccagaagtctgcctcagcacgcctattagtgatggaccgtcctgatcctcccact
aacttggagttgtcagatccatatgaacgtagtgtgagactcagttgggcccctggagac
aacaaccacaacccgatttcagagtacctagtgcagtatgatgatgacgactggttgcct
gggaagtggaaaaacctgtcaacgtacgcagggaacctcaactctgtcatcctgcatctt
acacctttcacctactacgagttccgggtcatcgctatcaacgaaattgggatgagtcgt
cctagtcgtccatctaaacgcttccagagcagcggtgcacccccagatgtcatcccaaag
aacttaaagggtgtgggcacatggaggaataacatggagatcagctgggagcctctaacc
tacagagagtggaacgggccccacctgaagtatttggtgtggtggaggaggagagattcc
cgagaggagtggaagaacgcaaccacaaaatggttgaaatactacatctacgatgcagat
accttcactccttatgagatcaaagtccaggctgtcaacgactttgggctgggtccagaa
tctcctgttgtcactggttactctggggaagaccgtcccttatctgcacctctgaacctg
agagtgtccgacatcgagagcacccaggcgaccttacactgggacacggtggagcgcggc
tctattatgggagaactgaaagaatacaagatttattactggagggacagcagccagctg
aggtggcatagggtcaaccgagggatgaagtctaaaacatttccaaacgatgatccagag
ccctctggggtgctcactggactcatcccctatagcaactacaagatgtatatagtggtg
gcaaacaatcgatacgaaggcccgcctagtaataatatacacttctcaacacctgaagga
gtgccatccgtgcccaaatccttcaggatccaacagcgacatctggacagtatatacgtc
gactgggacctgccagcagaacccaacggtatcattacgggatattccctcaagtatcag
acagtgaatgccaccaggggagaggagctgcgagttgaggagttccttcctaatgtaaca
agtttctcagtccgacgatacgaccgctacactcgatacagattctctgtggcggcacga
actcggatagggataggggaatggcatacggaggagtcaccccactacaccactgaaatt
tatgcccaggaccaggtggacatctccactcagggctggttcatcgggattatgtgtgct
gtggctctcatcgtgctcatcctactcatagtctgcttcatcaagaggagtcgagggggg
aaatacccagtccgggagaaaaaagacatttcattggagccggtggatgacaaagatcag
gaggggtcatttgactaccggtctcttgaaaggatagcacgagtctccactctgccttac
ccacggcgagaggaggaaagagggcttcaaagaggccaaccatctatggaggcaatgatg
aagcgatcagacagtgacgacagtctggtggactatggtgagggaggtgagataccgttc
aacgaggacggctcgttcatcggccagtacacaggaaccaggagagatgtcagggatttg
gactttggtggaagtctggagctccattctccgatgaataccatctactccctggcataa
DBGET
integrated database retrieval system
