Larimichthys crocea (large yellow croaker): 104939348
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Entry
104939348 CDS
T04659
Symbol
hexb
Name
(RefSeq) beta-hexosaminidase subunit beta isoform X2
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco00511
Other glycan degradation
lco00513
Various types of N-glycan biosynthesis
lco00520
Amino sugar and nucleotide sugar metabolism
lco00531
Glycosaminoglycan degradation
lco00600
Sphingolipid metabolism
lco00603
Glycosphingolipid biosynthesis - globo and isoglobo series
lco00604
Glycosphingolipid biosynthesis - ganglio series
lco01100
Metabolic pathways
lco04142
Lysosome
Module
lco_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
104939348 (hexb)
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
104939348 (hexb)
00513 Various types of N-glycan biosynthesis
104939348 (hexb)
00531 Glycosaminoglycan degradation
104939348 (hexb)
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
104939348 (hexb)
00604 Glycosphingolipid biosynthesis - ganglio series
104939348 (hexb)
00511 Other glycan degradation
104939348 (hexb)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
104939348 (hexb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
lco03110
]
104939348 (hexb)
Enzymes [BR:
lco01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
104939348 (hexb)
Chaperones and folding catalysts [BR:
lco03110
]
Intramolecular chaperones
Others
104939348 (hexb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
MHV_Nsp3_DPUP
Motif
Other DBs
NCBI-GeneID:
104939348
NCBI-ProteinID:
XP_010754177
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All DBs
Position
IX:complement(4394406..4400809)
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AA seq
552 aa
AA seq
DB search
MITTTLTLLLLSLGFCKGGLQENYIDDFEETEEVEVFAQPSKYGSLWPLPQKVQISEVSF
KLSSSSFKIVDAKQSSAGASCSLLQDAYRRYFEYMFGSGKRQQLNKGRRGGPSEVTELQV
WITSPDSECDGYPSVSSDESYELTVTDQPYAVLKAPKVWGALHGLETFSQLVYEDQYGAK
SINSTSINDFPRFAHRGILLDTSRHFLPIKVILANLEVMAWNKINVFHWHIVDDPSFPYL
SRTFPQLSQKGAFQPYTHVYTPADVKMVIEFARLRGIRVVPEFDTPGHTQSWGKGQPDLL
TPCYSGSKPSGTFGPVNPILNTTYEFMTQFFKEISTVFPDAYVHLGGDEVDFSCWKSNPD
IQKFMEQQGFGQDYKKLESFYIQKLLDIVTTTKKGYMIWQEVFDNGVKLKPDTVVHVWIG
GGSNEEMSRVTDAGYTTILSAPWYLDYISYAQDWQKYYKVEPLSFNGTEAQKKLVIGGEA
CLWGEYVDATNLTPRLWPRASAVAERLWSAKDVTDINDAYNRLSAHRCRMVDRGIPAQPL
FYGFCPHEYKGI
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgatcactactacattgacactgctgttgctgagcctcggtttttgcaagggggggctg
caagaaaactacatcgatgacttcgaggagacggaggaggtcgaggtcttcgcccagcct
tcgaaatacggatccctgtggcctctgccgcagaaagtgcagatctcggaggtttcattc
aagttgagcagctccagcttcaagatagttgacgccaagcagtcatcggctggtgcgagc
tgcagcctcctgcaggatgcgtacaggaggtattttgaatacatgtttggaagtggtaaa
aggcagcagctgaacaaaggcaggcggggagggccttcagaggtgacagagcttcaggtg
tggatcacatcacctgactctgaatgtgacggttaccccagcgtgtcatctgacgagtca
tatgaactgacagtgacagatcagccgtatgctgtgctgaaagcaccgaaggtctgggga
gccctgcatggtctggaaactttcagccagttggtgtatgaagatcaatatggagctaaa
agcatcaattcaacctcaatcaatgacttccccagatttgcacacagaggcatcttactg
gacacctctagacatttcctgcctattaaagtcatcttggctaatctggaagtaatggcg
tggaacaaaattaatgttttccactggcacattgtggatgatccatccttcccctatctg
agccgaacgttcccacagctgagccagaagggagctttccagccatacacacatgtgtat
acacccgctgacgtgaagatggtgattgagttcgcacgtctcagaggcatccgtgttgtc
ccagagtttgacactccaggacacacacagtcttggggcaaaggccagcccgatctgctc
acaccctgttactccggctccaaaccctctggcacctttggaccagtgaaccctatcctg
aacaccacgtatgaattcatgacccagtttttcaaggagatcagcaccgtgttccccgat
gcctacgttcacctgggaggtgatgaggtggacttcagctgctggaagtccaacccggac
attcagaagttcatggaacagcaaggcttcggacaagactacaagaaactggaatcattc
tacatccaaaaacttttggacatcgtcaccactaccaaaaagggctacatgatctggcag
gaggtctttgacaatggtgttaagctaaagccagacacagtagtgcatgtgtggatcggc
ggtggctctaatgaggagatgagcagggtgacggacgcagggtacaccaccatcctctcc
gccccatggtacctagattacattagctacgcgcaggactggcagaagtactacaaggtt
gagccactcagcttcaacggaactgaagcacaaaagaagcttgtgattggtggagaagcc
tgtttgtggggagagtatgtggacgccaccaacctcacacccagactctggcctcgtgct
agtgctgtggcagagcggctgtggagcgctaaggatgtgacagacatcaacgatgcctac
aacagactgtctgcgcaccgctgccgtatggtggatcgtgggatcccagctcagccgctg
ttttatggcttctgtccccacgagtacaaagggatctaa
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