Larimichthys crocea (large yellow croaker): 104939375
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Entry
104939375 CDS
T04659
Symbol
ttf1
Name
(RefSeq) transcription termination factor 1 isoform X2
KO
K15225
transcription termination factor 1
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lco03021
]
104939375 (ttf1)
Transcription machinery [BR:
lco03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
104939375 (ttf1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Piezo_TM1-24
Myb_DNA-bind_8
Motif
Other DBs
NCBI-GeneID:
104939375
NCBI-ProteinID:
XP_010754210
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All DBs
Position
XI:19986377..19998671
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AA seq
679 aa
AA seq
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MKPPAGSPSPQKRRRSVSPPPVDVNTPERLKKKKKKREEEELTPPSPAPAEDDGNTSSQK
KKKKKREEDTEVTIETSETETKKKKKKKREEEELTPPSPAPPAEDDGNTRSQKKKRKKKK
REEEELTPPSPAPPAEDDENTRSQKKKKREEEELTPPPADGEEVAEETSETETKKKKKNK
NRLIDEHGVAKATTDHNDRETQSVVSMETNNSRTLKYEQIEVAIETGNTETKKKKKKKNR
PSEETIATATDDNARETQSVVSMETNNRTEMGDGVMSQEGEAEEETGREEECFGQQEAEL
LEFVPDLKKKSADQIKKLLRYDLHRFKYFKKQGVCLRRGRFSQEENQVIRQNVQDFLVLT
GISSANQLLFPQRFKEQEAEIRKLRVQHNFMERIAEGIPRSCQRVLTRAKKMFDERNHMG
RFSEEEVRSLVKLQNLHGNDWRMISEKTGRSIYALQKRFTSIAAGRGQWSRDEESRLKAA
LKTCLKDLVQQSSAEPGLSRDQLCNNLPWKEISEKVQTRSWSQCRLKWFTLLKSKLSSGV
GTFNRGPEGLQAKINLINALHHMCVDDIADIDWDEVAEAVGKVTPVCVQKSFHRLKVSKV
PNWTRLSYGEVIDFLQVNVCPRLEERLQKARRKQQEEEEQQQEEQEENRYLLSDVFTTND
EEDNEEDEEDSQLTSGHST
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctcctgcagggtctccgtcccctcagaagaggaggaggtcagtcagtccgcca
cctgttgacgtcaacacacctgagagattgaagaagaagaaaaagaagagggaggaagag
gagctcactcctccttctcctgctcctgctgaggatgatggaaatacaagcagtcagaag
aagaagaagaagaagagagaggaggacacagaggtcaccatagaaaccagcgagacagaa
acaaagaagaagaagaaaaagaagagggaggaagaggagctcactcctccttctcctgct
cctcctgctgaggatgatggaaatacaaggagtcagaagaagaagaggaagaagaagaag
agggaggaagaggagctcactcctccttctcctgctcctcctgctgaggatgatgaaaat
acaaggagtcagaagaagaagaagagggaggaagaggagctcactcctcctcctgctgat
ggagaggaggttgccgaagaaaccagcgagacagaaacaaagaagaagaagaaaaacaag
aaccggctgattgacgagcatggcgtcgccaaggcaacaacagatcacaacgacagagaa
acacagtctgtggtttccatggaaaccaacaacagcaggacattgaagtacgagcaaata
gaggtcgccattgagactggcaacacagagacaaagaagaagaagaaaaaaaagaacagg
ccgagtgaggagaccattgccacggcaacagatgacaacgccagagaaacgcagtctgtg
gtttccatggaaaccaacaacaggacagagatgggagatggtgtgatgtcacaggaagga
gaggccgaggaggagacaggaagagaagaagagtgttttggtcagcaggaggcggagctt
ctggagtttgtacctgacctgaaaaagaagtcagctgaccagatcaaaaaactgctgaga
tacgacctgcaccgcttcaagtacttcaaaaaacaaggtgtgtgtctgcgtcgggggcgg
ttctctcaggaggagaaccaggtcatcagacagaacgtgcaggacttcctggttctgaca
ggaatcagctcagccaatcagctgctgtttcctcagaggttcaaagagcaggaggcggag
atcaggaagctgcgagtgcaacacaacttcatggagcggatcgctgagggcatccctcgg
tcgtgtcagcgggttctgacgagggcgaagaagatgtttgatgagaggaaccacatgggc
aggttctcagaggaagaggtccggtctctggtgaagttacagaacctccatggcaacgac
tggaggatgatctcagagaagaccggtcgcagcatctacgccttacagaaacgcttcacc
agcatcgctgcaggtcggggacagtggagtcgagacgaggagtccaggttgaaggcggct
ctgaagacttgcctgaaggatctggtccagcagagttctgcagaacctggtctaagcaga
gaccagctgtgtaacaacctgccctggaaggaaatcagcgagaaggtccagaccagatcc
tggagccagtgtcgactcaaatggttcaccctactgaagtccaaactgtcttcgggtgtc
ggcaccttcaacagaggacctgaaggacttcaggctaaaatcaacctcatcaatgcgttg
catcacatgtgcgtggacgacatcgccgacatcgactgggacgaagtcgctgaggctgtc
ggtaaagttactcccgtgtgtgttcagaagagttttcaccgactgaaagtttccaaagtt
ccaaactggaccagattatcatacggagaggtcatcgacttcctgcaggtgaacgtttgt
cctcgtctggaggagaggctgcagaaggcgaggagaaagcagcaggaggaggaggagcag
cagcaggaggagcaggaggagaacaggtacctgctgtcagacgtcttcaccaccaacgat
gaggaggacaacgaggaggacgaggaggacagtcagctgacctccggccattcaacttaa
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