Larimichthys crocea (large yellow croaker): 104939608
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Entry
104939608 CDS
T04659
Name
(RefSeq) vinculin isoform X7
KO
K05700
vinculin
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04510
Focal adhesion
lco04520
Adherens junction
lco04810
Regulation of actin cytoskeleton
lco04820
Cytoskeleton in muscle cells
lco05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104939608
04520 Adherens junction
104939608
09142 Cell motility
04820 Cytoskeleton in muscle cells
104939608
04810 Regulation of actin cytoskeleton
104939608
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
104939608
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lco04812
]
104939608
04147 Exosome [BR:
lco04147
]
104939608
Cytoskeleton proteins [BR:
lco04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
104939608
Exosome [BR:
lco04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104939608
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
DUF3080
Mob_Pre
Motif
Other DBs
NCBI-GeneID:
104939608
NCBI-ProteinID:
XP_010754468
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Position
III:complement(14724377..14748719)
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AA seq
1133 aa
AA seq
DB search
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTVPVAAVQAAVSNLVRVGKE
TVQTTEDQVMKRDMPPAFIKVENSSSKLVQAAQMLKADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLAVAEVVETMEDLITYTKNLGPGMTKMSKMIEERQQ
ELTHQEHRQMLINSMNTVKELLPVLISAIKIFVATKSSRGAGVEEAERNRRFTFEKMSAE
ISEIIRVLQLTTWDEDAWANKDMEALKRSLALIESKMAQAKTWLKDPHGQPGDPGEVALR
VILDEAGKVGELCAGKERKDILATAKALGQMTDQIADLRARGQGPTPGCVQRAGQCSQGL
DLLFGKVDGAARRLEALINAKQAIARRLDAAQAWLADPNGGPEGEENIRALLAEAKRIAD
LCEDPRERDDILRSISEIAGLTARLMELRRQGKGDSPEARALAKQIGAALLTLQSKTNRA
VANMRPAKPAVTLEGKMEQALRWVNNPGVDDRGVGQAAIRGMVGEGKRLAGGLLGPYRQD
MIGRCDRTEALMTSLADMASRGEAEAPHARATAAQLQDSLKDLRQHMQEVMTQEVSDVFS
DTTTPIKLLAVAATAPPDAPNRGEVFEERAGNFETHAGRLGSTAEKAAAVGTGNKSTVEG
IHAAVKHARELTPQVTSAARILLKNPGNKAAYEHFDTMKNQWIDNVEKLTGLVDEAIDTK
SLLDASEEAIKKDIDKCRVAMANVQPQMLVAGATSIARRANRVLLVAKREVENSEDPRFR
DTVKHASDILSHTISPMVMDAKAVAGNIQDKALQKAYLDSCLRILAAVGKVREAFQPQEP
DFPPPPPDLDQLHVSDEQAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVLSEPMMV
AARQLHDEARKWSSKPQPPCPTQPEDEEAVEEREVDDEDEFTDGEDDYEPELLMMPSNQP
VNQPILAAAQSLHQEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGNKRALIQCAKD
IAKASDEVTRLAKEVAKQCTDRRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISE
EESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgtttcacaccaagaccatcgagagtatcctggagccggtggcccagcagatc
tcccacctggtcatcatgcacgaggagggggaggtggacggtaaagccatcccagatctg
acggtgccggtggccgcggtgcaggcggcagtcagcaaccttgtgcgggtggggaaggag
acagttcaaaccaccgaggaccaggtgatgaagagagacatgcctcctgcgtttatcaag
gtggagaattcgagctctaagctcgtccaggcggctcagatgctaaaggcagatccatac
tctgtgcctgcacgggattacctgatcgatggatccagagggatactgtccggaacgtcg
gacctgctccttacctttgacgaggccgaggtgcgtaagataatacgtgtgtgtaaaggt
atcctagagtatctggcagtagctgaggtggtggagaccatggaggacctcatcacttac
accaagaacctgggaccagggatgaccaaaatgtcaaagatgattgaggagaggcagcag
gagctgacgcaccaagagcacagacagatgctaatcaactccatgaacactgtcaaagag
ctgctgcctgttcttatatcagctataaagatttttgtggcaaccaagagcagtcgagga
gccggcgtggaggaggcggagaggaacagaaggttcacgtttgaaaagatgagcgctgaa
atcagcgaaatcataagagtcttacagctcaccacatgggatgaagacgcctgggctaat
aaggatatggaggctttgaagagatctctggctttgattgagtcaaagatggcacaagct
aaaacctggctcaaagacccccatggacagccaggagaccccggtgaggtcgccctgcgt
gtgatactggatgaagctggtaaagttggagagctgtgtgctgggaaggagagaaaagac
atactggcaactgctaaagctctgggacaaatgactgaccagatcgcggatctacgagcc
agaggccagggcccgaccccagggtgtgtgcagcgtgcaggccagtgctcacagggctta
gacttgttatttggcaaggtggatggtgctgctcgcagactggaggctctaatcaatgcc
aagcaggccattgccagaaggctggatgctgcacaggcctggcttgctgatcctaacggc
ggtcctgagggtgaagaaaacatcagagcactactagcagaggccaaacgcatcgcagat
ctatgtgaagaccccagagagagggatgacatcctgcgctccatcagtgagatcgcaggc
ctcactgctagacttatggagctacgcagacagggtaaaggtgacagcccggaggcccgt
gcactggcaaagcagattggggcagcgctgctgaccctgcagtccaaaaccaaccgagcc
gtagccaacatgagaccagctaaacctgccgtcactctggagggcaagatggagcaggcc
ctgcgctgggtgaacaaccccggagtggacgacagaggagtaggtcaggcagcaatcaga
ggaatggttggagaggggaagaggctggcaggaggcctgttaggcccgtaccgtcaggat
atgatcggacgctgcgatcgaacggaggctctaatgacatctttggcagacatggccagc
aggggcgaggctgaggctcctcatgcacgggctacagccgcacaactgcaggacagcctc
aaggacctgaggcagcacatgcaggaggtgatgacccaagaagtatctgatgttttcagt
gacaccaccacccctatcaaactgctggctgtggctgcaactgctccccccgatgccccc
aacaggggagaggtttttgaagagcgtgcagggaacttcgagacccacgccggtcggttg
ggatcgactgcagagaaggctgctgccgtgggaacaggcaataagagcacagtagaaggc
atacacgctgctgtgaaacatgccagagagctcacgccacaggtgacctctgctgctcgg
atcttgttgaagaatcctgggaataaagcagcatatgagcattttgacacgatgaagaac
cagtggattgacaatgtggagaaactcactggcctggtggatgaggccatcgacaccaaa
tctctgttagatgcctctgaggaggctataaagaaagacattgataagtgccgtgttgcc
atggcgaatgttcagccccaaatgcttgttgccggggcaacaagcatagcaagacgagct
aatcgggtcctgttggtggctaagagagaagtggagaactctgaagatccgcgtttcaga
gacacggtgaaacacgcgtcagacatcctctcacacaccatctcacccatggtgatggat
gctaaggcggtggctgggaacatacaagataaggctttgcaaaaggcctacttggactcg
tgtctgaggatcctggctgcagtcggaaaagttagagaagccttccaaccccaagagccc
gacttccctcctccaccacctgacctggaccagctccatgttagtgatgagcaggcacca
cccaagcccccattgccagagggcgaagtgcctccaccacggccccctcctcctgaggag
aaagatgaagagttcccagagcagaaggctggagaggtgctcagtgagcccatgatggtg
gccgccaggcagctgcacgatgaggcacgcaagtggtcaagcaagccccagcccccttgc
cccacccagcctgaggatgaggaggcagtagaggagagggaggtagatgatgaagatgag
tttactgatggtgaggatgactatgagccagaactgctgatgatgccctccaaccagcct
gtcaatcaacccattctggcagctgcccagtctctccaccaggaggcgcgcaagtggtcc
agcaagggtaacgacatcattgcagcagccaagcggatggctctgctaatggcagaaatg
tctcggctggtgcgtggtggaagtgggaacaaacgagccctgattcagtgcgcaaaggac
attgccaaggcctcggatgaggtgacaagactggctaaagaagtggccaagcagtgcacc
gacagacgcatcagaactaatctgctacaggtgtgtgaacgaatccccaccatcagcact
cagctgaagatcctctctactgttaaagccaccatgctgggacggacaaacattagtgaa
gaggagtcagagcaggccacagagatgttggtccataatgcccagaatctgatgcagtca
gtgaaggagactgtcagagaggcagaagcagcctccatcaagatccgcacagatgcagga
ttcacccttcgctgggtgcgcaagaccccctggtaccaataa
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