Larimichthys crocea (large yellow croaker): 104939938
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Entry
104939938 CDS
T04659
Symbol
itga7
Name
(RefSeq) integrin alpha-7 isoform X1
KO
K06583
integrin alpha 7
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04510
Focal adhesion
lco04512
ECM-receptor interaction
lco04810
Regulation of actin cytoskeleton
lco04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104939938 (itga7)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104939938 (itga7)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104939938 (itga7)
04810 Regulation of actin cytoskeleton
104939938 (itga7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lco04147
]
104939938 (itga7)
04515 Cell adhesion molecules [BR:
lco04515
]
104939938 (itga7)
Exosome [BR:
lco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104939938 (itga7)
Cell adhesion molecules [BR:
lco04515
]
Integrins
Integrin alpha subunits
104939938 (itga7)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP
FG-GAP_3
Motif
Other DBs
NCBI-GeneID:
104939938
NCBI-ProteinID:
XP_019126273
LinkDB
All DBs
Position
VI:14152313..14186315
Genome browser
AA seq
1120 aa
AA seq
DB search
MAALVGHGNTVSSCSSHPWTSLLWALLTLLSQVWGFNLDTTHTLHKLGDHGTFFGFSLAL
HQQINPEPQSWILVGAPQAAGQGLLRGSRPGALFRCPITPEEYDCERVDIDGDVSWNREN
KDNQWLGVTVKSQGIGGKVVTCAHLYELRQRVSQPSETRDPIGRCYVLSEDLTERDDLDG
GEWKFCEGRPQGHEQFGFCQQGLSVSFTPDNNFILFGAPGTYNWKGEMRVQLLNQTLLDL
GFYDDGPYEVADQKQLNAQLIPVPYHSYLGFSVDSAMGIMSLRELTFVAGAPRANHTGAV
VLLRKDNVYRLVPQHIFWGEELASSFGYSVATTDLNNDGWTDLIIGAPNFFDRKAEIGGA
VYVYLNPFGRWADQARPIRLNGTYDSMFGMTVTSVGDLDQDGYGDIAVGAPFDGDGKVFI
YRGSDSGIETKPAQVLDGRDFDVRRFGYSISGGLDIDNNQYPDIAVGSLNDSVVLFRSRP
VIHVIREISINPNSIDLAQHNCKGREGVCVEVKACFVFVAHPEHYSPHITLVVHFEADTE
RRKLGLPHRVNFLGRSSLEPEYTQTEEVQLHRQRHPACTTAVFQLHESIRDKLRPISLAI
THTIKPVPPRRHSGAKSLEKLEPVLSVSPSNTLHSEVNFLREGCGLDKICQSNLKLSYQF
GTRPLTSDLFTPLPKDEEDVQVFSLSDQRLVVLEITVTNMPSDPLRPDEDGDDAHAAQLL
ISLPNTLSYAGSRIPPQMRCQANQNGSQIECDLGNPMKRDAKLKFSINLSTSNITIETTE
LTADLSLTTISEQSDLAPVTAFAKVVIELPLSVSGLARPHQLFFSGTVKGESAMTSLEDI
GSPVDFEFVVANPGQALQTLGSAFLNIMWPYELTNEKWLLYPASLKFEGHPNTQCTPSGA
LNPLKLHSTSPGELPQVAGRTRRSHPEDEGQVMTKGSVGRTTPAVAASERRKSLKLDCLL
GSARCVLFQCPLHSFSGQAVLRIHARLWNSSFIEEFQTVSALELLVRANITVKSTIKHLV
LKDAAAQVPVMIYPEPGLADQYWIPWWIILIAVLAGILLLTLLVCILWKCGFFQRAHYKD
KLPQYHAVKIPREDRPQFQTEKSGVVHKKEWATHWSDGTS
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atggcagccctggtgggacatgggaacactgtctcatcttgttcctctcatccttggact
tccctcctttgggctcttttgacccttctaagccaagtgtggggttttaacctggatact
actcacacattacacaagttgggagaccatggtaccttttttggtttctctctagcactt
caccaacagattaacccagagccacagagctggatccttgtgggggcgccgcaggcagca
gggcagggcctgttgaggggcagtcggccaggagccttgttcaggtgtccaatcacacca
gaggaatatgactgtgagagggtggatattgatggagatgtgagttggaacagagagaac
aaagacaaccaatggctgggagttactgtgaagagtcaggggattggaggaaaggtggtg
acctgtgcgcacctgtatgagctcagacaacgtgtaagtcaaccctcagagactcgtgac
ccaattggacgctgctacgtcctgagcgaggatctgacggagcgagatgacttggacgga
ggggaatggaagttctgcgaaggccggccacaggggcacgagcagtttggcttctgtcag
cagggcctgtctgtcagttttaccccagacaacaacttcattctgtttggggctccggga
acgtacaactggaaaggtgagatgcgcgtccagctcctaaaccagactctgcttgatctc
ggtttctatgacgacggaccctacgaggtggcagatcagaaacaacttaatgcccagctc
atccctgtgccctaccacagttacctgggattttctgtggactctgcgatgggcataatg
agcctcagggagctgacctttgtggcgggtgcacctcgggccaatcacacaggggcggtg
gtgctgttgaggaaggataacgtgtaccggctggtaccacaacacattttctggggggaa
gagctggcgtcttcatttgggtactcggtggctacaacggatctgaacaatgatggttgg
acagatctgattattggagctccgaatttctttgaccgtaaggcagagattggtggagct
gtatatgtgtacctaaacccctttggtcgctgggccgatcaggctcggcctatccgtctc
aacgggacctatgactccatgtttggaatgacagtcaccagtgtaggagacctggaccag
gacgggtatggagatattgctgtgggggcaccgtttgatggagatggcaaagttttcatc
tacagaggctccgattctggaattgaaactaaacctgctcaggttcttgatggtcgtgac
tttgatgtgagacgttttggatactccatctcaggtggtcttgatattgataataaccag
tatccagatattgcagtgggctctctgaatgattcagtggttctcttcaggtctcgtcca
gtcatccatgtgatcagagaaatatctatcaatcctaactccattgatctggcgcaacac
aactgcaaaggcagagaaggagtctgtgtggaggtcaaggcctgcttcgtcttcgtagcc
cacccggaacactactcaccacacattaccctggttgtgcactttgaggctgacacagaa
cgcaggaagttgggcctcccgcaccgcgtcaacttccttggtcgcagctccctggagcca
gagtacactcagactgaagaagtgcagctgcatcgacagcgtcaccctgcgtgcacaact
gctgttttccagctccatgagagcatccgtgacaaacttcgtcccatctcgttggcgata
actcacactatcaagcctgttccaccgcgcagacactcaggtgccaagagcctggagaag
ttggagcctgtactgagtgtttccccctctaatacattgcactctgaggtgaacttcctg
cgagaaggatgcggacttgacaaaatctgccagagcaacctgaagctgagctaccagttt
ggaacacgacccctgacctccgacctcttcactcctctgccaaaagatgaggaagacgtg
caggtgttctccctgtcagaccagcgcttagtggtgctggagatcaccgtcaccaacatg
ccctctgaccccctccgacctgatgaggacggagatgacgctcatgctgctcagctgctt
atctctcttccaaacactctgtcgtatgccggctccaggatcccaccacagatgagatgc
caagcgaaccagaatggctcccagattgaatgtgacctgggaaaccctatgaaacgagat
gctaagctgaagttctccatcaacttaagcacatctaacatcacaattgagaccactgag
ctgacagcagatctctcactgacaactatcagtgagcagtctgacctggcaccggtcaca
gcttttgctaaagttgtgatagagctccctctgtctgtcagtggccttgctcgtcctcac
cagctgttcttcagcgggacagtgaagggagagagtgccatgaccagtctggaggacatt
ggcagtcctgtggactttgagtttgtggtcgccaaccccgggcaagctctgcagacgctc
ggctcggccttcctcaacatcatgtggccttacgagctgaccaatgagaaatggctcctg
tatcctgccagcttgaagtttgagggtcatccaaacacacagtgcaccccatcaggggcc
ttaaatcctctgaagctacacagcacctcacctggagagcttccacaggtggctgggcga
acacgccgctcacacccagaggacgaaggtcaagtgatgacaaaaggcagcgtgggacga
acgaccccagctgtggcagcttcagagcgacgaaagtcactcaaactggattgtctcctg
gggtcagcgcgctgtgtcctgtttcagtgtcccctccacagcttctctggtcaggctgtc
ctcaggatccacgccaggctgtggaacagcagtttcatagaggagtttcagacagtcagt
gctctggagctgctggtcagagccaacatcactgtgaagtccaccatcaaacaccttgtc
ctcaaggatgctgctgcacaggttcctgtgatgatctatcctgagcctgggcttgctgac
cagtactggatcccctggtggatcatcctcatagccgtcttggcaggcatcctgctgttg
actctactggtctgcatactgtggaagtgtggcttcttccaacgggcccactacaaagac
aaattgcctcagtaccacgcggtgaagattcctcgcgaggaccggccacagttccagact
gagaagtcgggagttgtccataaaaaggaatgggccacgcactggagcgacgggacctca
taa
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