KEGG   Larimichthys crocea (large yellow croaker): 104940217
Entry
104940217         CDS       T04659                                 
Symbol
raf1
Name
(RefSeq) RAF proto-oncogene serine/threonine-protein kinase isoform X1
  KO
K04366  RAF proto-oncogene serine/threonine-protein kinase [EC:2.7.11.1]
Organism
lco  Larimichthys crocea (large yellow croaker)
Pathway
lco04010  MAPK signaling pathway
lco04012  ErbB signaling pathway
lco04068  FoxO signaling pathway
lco04140  Autophagy - animal
lco04150  mTOR signaling pathway
lco04210  Apoptosis
lco04218  Cellular senescence
lco04270  Vascular smooth muscle contraction
lco04370  VEGF signaling pathway
lco04371  Apelin signaling pathway
lco04510  Focal adhesion
lco04540  Gap junction
lco04625  C-type lectin receptor signaling pathway
lco04810  Regulation of actin cytoskeleton
lco04910  Insulin signaling pathway
lco04912  GnRH signaling pathway
lco04914  Progesterone-mediated oocyte maturation
lco04916  Melanogenesis
lco05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:lco00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    104940217 (raf1)
   04012 ErbB signaling pathway
    104940217 (raf1)
   04370 VEGF signaling pathway
    104940217 (raf1)
   04371 Apelin signaling pathway
    104940217 (raf1)
   04068 FoxO signaling pathway
    104940217 (raf1)
   04150 mTOR signaling pathway
    104940217 (raf1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    104940217 (raf1)
  09143 Cell growth and death
   04210 Apoptosis
    104940217 (raf1)
   04218 Cellular senescence
    104940217 (raf1)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    104940217 (raf1)
   04540 Gap junction
    104940217 (raf1)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    104940217 (raf1)
 09150 Organismal Systems
  09151 Immune system
   04625 C-type lectin receptor signaling pathway
    104940217 (raf1)
  09152 Endocrine system
   04910 Insulin signaling pathway
    104940217 (raf1)
   04912 GnRH signaling pathway
    104940217 (raf1)
   04914 Progesterone-mediated oocyte maturation
    104940217 (raf1)
   04916 Melanogenesis
    104940217 (raf1)
  09153 Circulatory system
   04270 Vascular smooth muscle contraction
    104940217 (raf1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    104940217 (raf1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:lco01001]
    104940217 (raf1)
Enzymes [BR:lco01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     104940217 (raf1)
Protein kinases [BR:lco01001]
 Serine/threonine kinases: TKL group
  RAF family [OT]
   104940217 (raf1)
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr RBD C1_1 Kinase-like zf-RING-like ABC1 Pkinase_fungal C1_2
Other DBs
NCBI-GeneID: 104940217
NCBI-ProteinID: XP_027133107
LinkDB
Position
Unknown
AA seq 649 aa
MEHLQGAWKTLSNGFGMKDSAFEGPCLSPTMVQGFSCQRRSSDDSKMPDSKTSSTIRVYL
PNQQRTVVNVRSGMTLHSCLIKALKVRGLQPQCCAVFKLHPGQKSKKFRMDWNTDSTSLI
GEELLVEVLDHVPLTTHNFVRKTYLKLAFCDICQKFLLNGFRCQTCGYKFHEHCSTKVPT
MCVDWSNIRQLLLCPTPGDSGAPSLPPLTSRRMRESLTRFPSSAHRYSTPHAFNYTTPYP
PTGGGLSQRQRSTSTPNVHMVSTTLPVDSSMIEDAMRDHDSAGSSPSQSPTGWSQSKAPA
PAQRERATSFNTQEKNKIRPRDKRDSSYYWEIEASEVYLHSRIGSGSFGTVYKGKWHGDV
AVKILKVTDPTPEQFKAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKH
IHVLETNFKIIQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATV
KARWSGSHQVEQPSGSILWMAPEVIRMQDNNPYSFQSDVYSYGIVLFELMTGELPYSQTA
NRDQVSGVSLLSLTPSFQIIFMVGRGYLSPDLSKLYKNCPKAMKRLVADCIKKSKDERPL
FPQILSSIELLQHALPKINRSASEPSLHRASHTEDINACTLTSTRLPVF
NT seq 1950 nt   +upstreamnt  +downstreamnt
atggagcacctccagggagcatggaagaccctgagcaatggcttcggaatgaaggactcc
gcgtttgagggcccgtgcctttccccaaccatggtccagggcttttcctgccagcgtcgc
tcctcagatgatagcaagatgcccgactccaagactagcagcacaatccgtgtctacctc
ccaaaccagcagcgcactgtggtaaacgtgcgttcaggtatgactctgcacagttgcctg
attaaagcattgaaggtgcgaggtctgcagcctcagtgctgcgctgttttcaagctgcat
ccaggacagaagagtaaaaaattccggatggattggaatactgactccacctccctcatt
ggagaggagctactggtagaggttttagatcacgtccccttgacgacacataattttgtt
cggaaaacatatctgaaactagcattctgtgatatttgccagaagtttcttttgaatggt
ttccgttgccaaacgtgcggctacaaattccatgagcattgtagcaccaaagtgcccacg
atgtgtgtggactggagcaatatcagacaactcctgttgtgtccaacacctggtgatagc
ggtgccccgtctctgcccccgctgacatcccggcgaatgagggaatccttaacacggttt
ccaagctcagcccatcgatattccacccctcatgccttcaactacaccacgccctaccca
cccacaggcggcggtctctcccagaggcaacgctccacatccacacccaacgtccacatg
gttagcactaccctgcctgtagacagcagcatgattgaggacgcaatgcgtgatcatgac
tctgcggggagttccccaagccagagtcctacaggctggtcccagtccaaagcccctgca
cctgcccagcgagagagggccacgtccttcaacactcaggagaaaaacaaaattaggcct
cgggacaagcgggactctagttactactgggaaatcgaggccagcgaggtgtatctgcac
tcccgcatcggttcaggctcatttggaactgtatacaaagggaaatggcatggtgatgta
gcagtgaagattttaaaagtgactgatcccacaccagagcagttcaaggcattcagaaat
gaggttgcagtcctgaggaaaacgcgacatgtcaacatcctgttgttcatgggctacatg
acgaaggacaacctggccattgtgacccagtggtgtgagggcagcagcctttacaaacac
attcatgtcctggagacaaacttcaagataatccagctcatagacattgccaggcagaca
gctcagggcatggactatctgcatgcaaagaacatcattcatcgtgacatgaagtccaac
aacatcttcttgcatgaaggcctaacggtgaaaatcggggactttggtctcgctacggtg
aaggccagatggagcgggtcacatcaggtggaacagccttctggatccattctctggatg
gctcctgaggttatccggatgcaggataacaatccctatagcttccagtctgatgtctat
tcctatggaattgttctctttgagctcatgacgggagagctcccatactcccagacagca
aacagagaccaggtgtcaggagtcagtctgctgtctctgactccctcgtttcagattatc
ttcatggtgggaagaggctatttgtctccagacctcagtaagctctacaagaactgcccc
aaagccatgaagaggttggtggccgactgcatcaagaagtccaaggacgagaggccactc
ttcccgcagatcttgtcctcaattgagctcctccagcatgccctccctaagataaaccgc
agtgcctcagaaccgtccctgcacagagcctctcacactgaggatatcaatgcctgtact
ctgacctccaccagactgcctgttttttag

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