Larimichthys crocea (large yellow croaker): 104940237
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Entry
104940237 CDS
T04659
Symbol
mbd4
Name
(RefSeq) methyl-CpG-binding domain protein 4 isoform X1
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
104940237 (mbd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lco03036
]
104940237 (mbd4)
03400 DNA repair and recombination proteins [BR:
lco03400
]
104940237 (mbd4)
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
104940237 (mbd4)
DNA repair and recombination proteins [BR:
lco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
104940237 (mbd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
104940237
NCBI-ProteinID:
XP_027133049
LinkDB
All DBs
Position
Unknown
AA seq
461 aa
AA seq
DB search
MLPTSCDVQLEANGDIINQSCKDEDDSCHTSTMPSGWIREVRVRKTGKTAGRLDVYIISP
QGLKFRSRASLHTFLLKNGDGELDINLFDFTASKGDDVITPSQVKPRVRKKKHADGQQVD
ATEILDPPPNKSKRASSTLKKKNIKLSEDAKHINTDIALEEIPHVGEIQGAPSPTVDDAT
VQKSPQRVGLLREKLLRLAPTSNQQKTLIVHKHTQADSQPSVPSLNVEPATESENEGEDE
RDRDEIQIHRKGDNEPNSEQETVEEEVLLPDITSGGCTRVRESQNKSKSMKDKRKTSPYF
SRKLTKDVLSPPRRKVFKKWTPPRSPYNLVQETLFHDPWKLLVATIFLNKTSGKMAIPLL
WQFFERYPSAQVIREADWKPMSELMMPLGLYELRAKTLIRFSDEYLTKQWRYPIELHGIG
KYGNDSYRIFCVGEWRQVTPQDHKLNKYHAWLWENHETLGI
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgctccccacaagctgtgatgtccaacttgaggccaatggagacataattaaccaaagt
tgcaaggacgaggatgattcgtgccacacttccacaatgccctctggctggatcagagag
gtgagggtgagaaaaacaggcaagactgcaggcagactggatgtctacattataagtccc
caagggctgaagttccggtcaagagcgtccctgcacactttccttctaaaaaatggagac
ggtgaattagacataaacctttttgatttcactgcatctaaaggcgatgatgtcatcact
ccctcacaagtgaaaccgagggtaagaaagaaaaaacatgcagatggacagcaggtggat
gcaacagaaatattggatccacctccaaataaatctaaaagagcctcttccaccctcaaa
aagaaaaatatcaagctctcagaggatgctaaacatattaacactgacattgcactggaa
gagatcccacatgtaggagaaatacaaggtgctccttcacccacagtggatgatgccaca
gtgcagaagagcccccagcgggtgggtctgctgagagagaagctcctcagactggctcct
accagtaaccaacaaaagactttaattgttcacaagcacacacaagcagactcgcagcct
tctgtccctagtctgaatgttgaacctgccactgagagcgagaacgagggtgaggatgaa
cgcgacagagatgagatacagattcacagaaaaggtgacaacgagcctaattctgagcag
gagactgtggaagaggaggtgttattacctgacatcactagtgggggctgcacaagagtg
agagaatcccagaataagtctaagagcatgaaagacaaacggaaaacaagcccgtatttc
agcagaaaactcaccaaagatgtcctgagcccacccaggaggaaggtcttcaagaagtgg
acaccccctcgctcaccctacaacctcgtacaggaaacccttttccacgacccctggaag
ctcctggtggccaccatttttctgaataagacaagcggtaagatggccataccactactg
tggcagttctttgagcgatatccgtctgcacaggtgatccgggaggctgactggaagccc
atgtctgagctcatgatgcccctgggcctatatgagcttagagccaaaacactcatccgc
ttctcagatgaatatctaacaaaacagtggcgttaccccatcgagctgcatggtattggg
aagtatggaaacgactcctacaggatcttctgtgtgggagagtggagacaggtgacacct
caagatcacaagttaaacaaataccatgcctggctgtgggagaaccatgaaacactcgga
atctga
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integrated database retrieval system
