Larimichthys crocea (large yellow croaker): 104940287
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Entry
104940287 CDS
T04659
Symbol
rad54l
Name
(RefSeq) DNA repair and recombination protein RAD54-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104940287 (rad54l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lco03400
]
104940287 (rad54l)
DNA repair and recombination proteins [BR:
lco03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
104940287 (rad54l)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
Rad54_N
Motif
Other DBs
NCBI-GeneID:
104940287
NCBI-ProteinID:
XP_019123536
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Position
XVII:complement(25054357..25060754)
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AA seq
740 aa
AA seq
DB search
MRRSLAPSQVAKRKQAGDPCEDEDWTCRTEKRRKSDAEVRESHVSPFRKPLTQLNSRPAC
MDGDKHEAFIRSILSKPFKIPIPNYTGSLGIRALGLKRAGVRKALHDPFAEDALVLYEPP
ILSAHDLIKAEKEKLPVHVVVDPVLGKVLRPHQREGVKFLWECVTGRRISESYGCIMADE
MGLGKTLQCIALMWTLLRQSPDAKPEIDKAIVVSPSSLVRNWYNEVGKWLGGRVTPVAID
GGSKDDIDRQLVNFISQRGLRAPTPILIISYETFRLHAEVLHKGKVGLVICDEGHRLKNS
DNQTYQALNTMSAQRRVLISGTPIQNDLLEYFSLVHFVNTGILGTAQEFKKRFELPILKG
RDADASDKDRQTGEEKLKELISIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQKELY
KRFLRQAKPIETLQEGKINVSSLSSITSLKKLCNHPALIYDKCVEGEEGFEGALDLFPPG
YCTKAVEPQLSGKMLVLDYILAMTRTTTSDKVVLVSNYTQTLDLFEKLCRSRSYLYVRLD
GTMSIKKRAKIVEKFNSPSNPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAM
ARVWRDGQKKTCYIYRLLSTGTIEEKILQRQAHKKALSSCVVDEEQDVERHFSLGELREL
FTLNEETTSDTHDKFRCRRCVNGREVRPPAEDSDCTSNLSQWNHCCDKKGLRDQVLKASW
DAAVSFVFHQRSHEDQKGVV
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgagaaggagtctcgcccccagtcaggttgctaaacggaagcaagcaggagatccgtgt
gaagatgaagactggacatgcaggactgaaaaaagacgaaaaagtgacgcagaggtgcga
gagagccacgtttcccccttcagaaagcctctgacacagctgaacagccggcctgcatgc
atggatggtgacaaacatgaggcatttattcgaagcatcctctccaagccttttaaaatt
cctattccaaattacacaggctctctgggaatcagggcgcttggtctaaagcgtgcagga
gtaaggaaagcacttcacgatcccttcgcagaagatgctttggttctttatgagcccccg
attctgagcgctcatgacctgatcaaagctgaaaaagagaaactacctgtccatgttgtt
gtggatccagttttaggaaaagtactcagaccccatcagagagagggggtgaagttcctg
tgggagtgtgtgacgggcagacgcatctcggagtcatatggctgcatcatggctgatgag
atgggcctggggaagactttgcagtgtattgccctcatgtggaccctgctacgccaaagc
ccagatgctaagccggagatagacaaggccattgtggtttcaccttccagtctggtccgc
aactggtacaatgaagtaggaaagtggctgggaggacgtgtcacaccggtggccattgac
ggaggttcaaaggatgacattgacagacagctagtgaacttcatctctcagcgtggtttg
agagcaccgaccccaatcctcatcatttcatatgagacatttcgactgcacgctgaggtt
ctgcacaagggcaaagtgggccttgtgatctgtgatgagggccatcgactgaagaactct
gacaaccagacataccaggccctaaacaccatgagtgcccagaggagagtgctgatatca
gggactcccatccagaacgacctgttggaatacttcagcttggtccactttgttaacact
gggatcctcggtacagcccaggagtttaaaaaacgctttgagcttcccatcctcaagggc
cgagatgcagatgcgagtgataaagacagacagaccggagaggagaaactcaaggagctg
atcagtatcgtcaacaggtgtttgatacggagaacatctgatatcttgtctaaatatctt
cctgtgaagatcgagcaggtcgtgtgttgcaggctgactcctctgcaaaaagagctctat
aagcgcttcctaaggcaggccaagcccattgagacgctacaagagggcaaaataaacgtc
tcctcactgtcttccatcacgtcactcaagaaactgtgcaatcacccagcgctcatctat
gacaagtgtgtggagggcgaggaaggctttgagggagcgctggatctgtttccacccggc
tactgcactaaagctgtggagcctcagctctctggtaaaatgctggttcttgactacatc
ctggcaatgacaaggaccacaactagtgacaaagtggtgctcgtctccaactacactcaa
accctggacctctttgaaaagttgtgcagatccagaagctacctctatgttcgactggat
ggcacaatgtccatcaagaaaagagccaagatagtggaaaagttcaacagtccatctaac
ccggagttcatcttcatgttgagcagtaaggctggtggatgtggcctgaatctgattggt
gctaaccgcttggttatgtttgatcccgactggaacccagccaacgacgagcaggcgatg
gcacgtgtgtggagagacggccagaagaagacctgctacatctacaggctgctctctacg
gggacgatcgaggagaagatcctgcagagacaggcccataagaaagccctgagcagctgt
gtggtggatgaggagcaagacgtggagcgtcacttctctctgggagaactccgagaactt
ttcactctaaatgaggagaccaccagcgacacacacgacaagtttcgctgtcgtcgctgc
gtgaatggcagggaagtccgtccccccgcagaggactctgactgtaccagtaacctctcc
cagtggaaccactgctgcgacaaaaagggcctgagggaccaagtgctgaaagcctcctgg
gacgctgctgtctccttcgtcttccaccagcgttctcatgaggatcagaagggtgtagta
tag
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