Larimichthys crocea (large yellow croaker): 104940361
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Entry
104940361 CDS
T04659
Name
(RefSeq) DENN domain-containing protein 3 isoform X1
KO
K20162
DENN domain-containing protein 3
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104940361
Membrane trafficking [BR:
lco04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
104940361
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DENN
WDR55
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_LRRK2
dDENN
uDENN
Beta-prop_EML_2
WD40
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
104940361
NCBI-ProteinID:
XP_010755252
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Position
XIII:17335928..17353576
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AA seq
1275 aa
AA seq
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MADHLPPVLLEACVVVGASNDKLREISQAINNNGTPKHLLLEPEVLHVLAPPFVSKPQAE
NELVRSHGRRRRSFLRKKREQPPSVAATPSQAHHISADGRGGSVEVIVPKDIDLMALPQL
CFPGGLQVTKEEKDEQFHFLVFTDVFGNKTHGVVMQYYRPILEEVSFFQNHGSFKFSKLF
SAYSFCVISKYPYFTALKDCLSCLLIQLRTCRLSDMEERVKEFAAKLALVPIPPPGQLHL
MFTLRPLTIVLPSQEDKDHPAIDLDLHLPFFCFRPQQLLQVLSCLLQEQRVVLFSADWAR
LTLVAESLLLFLQPLSWQQPYVPVLARGMLDFLMAPTAFLMGCHLSHFEEVAAETDDLIL
INIDNGSVSTSCSEIVDLPEIPPAAADCFTQRCLSLKIHFDLYQCCHASCTDISEQRAQR
RTWQHNLNHEIQRITLELIVNIFRDVSCHLNYEHRVFNSEEFLKTREPAEQLFYKMVLET
HIFHSFLKDRLNRKMDNFARMELSTRSEMQKMKGMVEIPRRPTMQEIQARRKSSFTESRL
SKRLGTSLPNLGDDQTISFQKNTLLTGIVISDPAVRTLPKPVNVFKLPDFPASLSFHSVQ
SYYSELIQQLGKAIFSVQNENPTLLARFYYLRGFINTLCSRRLDALADFQNLYKTDTAIF
PTQLVTWLMDSLHRDERQQADRRPELKRLILKVKTENEKLLVRPDDHVKKFKLPRKHLHQ
EEFVRCVQECGIVKDVATIHRLFDALTDGQPKKVDPELFKVFYTFWKEMEIEAQDVNLPS
GVIDHLDNSECVYKLSSCVKTSYGVGKIAMTQKRLFLLTEGRPGFLDITKFRDIQEVKIA
SAPFLLLRIPSLRIQTSRRPEVFEANLKTETELWNLVVKEMWAGRKMADQHKDPQYMTQA
LTNVLLMDAVTGCLQTQRSIIAASKLAYFDKIKHEVPMMVPKTTSETLKHKINPSLDLAE
PQTVHVLLYTPGHLTYNDSGGMMNPKLWVALSGGKVVVFDAASWSMLQDCIQVGESQLNC
MLGLVQEQVWIGSQDSVIYIIDTHSMSCNKQLTEHRHEVTGLTMDTRDQHSSQQTYSCSC
DGTILQWDSASLKVKRQFYLSCDRLSSIQIHNGTLWCCCGDSIMELKKSGTPQKRIALPD
DFQSMSSSFSCFIVIPERGQLWTGCADSGELCLWHTNNHRHPSKRISLPGSSGVTCMIRV
KDQLWVGCRGRAGVGGQCDGQLRSQVMVMDPESHTVAKELQAHSDSIQTLCSAEDRYVLS
GSARRDGKIAIWKVE
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccatctgcctcctgttctgctggaagcctgtgtggtggtaggagcatctaac
gacaaactccgggagatctcccaggccattaacaataatggaactccgaagcacctcctg
ttggagccggaggtactacatgtgttggcgcctcccttcgttagcaaaccgcaagctgaa
aacgaattagtaaggtcacatgggaggaggaggcgctcctttctcaggaagaagagggaa
cagcctccttcagttgcagcaactcccagccaagcccatcatatttctgcagacggaaga
ggaggaagcgtagaagtgattgttcctaaagacatcgacctcatggctttaccacagctc
tgctttccgggtgggctccaagtaaccaaagaagagaaagatgaacagttccacttcctg
gttttcactgatgtctttggcaacaagacgcatggagtagtaatgcagtattaccgacca
atactggaagaggtatcgttcttccagaaccacgggtcctttaagttttctaaacttttc
tctgcctacagtttctgtgtcatatccaaatacccttacttcactgcactcaaagactgt
ctgtcatgtctgttaatccagctgagaacttgtcgtttatcagacatggaggagagagtg
aaggagtttgcagccaagctggcattagtgcctatcccccctcctggacagctacatttg
atgtttactttgcgtcctctgaccattgtattaccatcccaagaagacaaggaccaccca
gctatagatttagaccttcatctcccgttcttctgcttcaggccacagcaactactccag
gtgctatcttgtctcctgcaggaacagcgggtggtgttattttctgctgactgggccaga
ctcacgctggtggcagagagcttgttgctttttttgcagcctctgtcatggcagcagcca
tatgttcctgtcctggccagaggcatgctggacttcctcatggctcctactgctttcctc
atgggctgccatctgagccactttgaggaggttgctgctgaaacagatgatctgattcta
atcaacattgataacggaagtgtttccacttcttgttctgagattgttgacctaccagag
attcccccagctgctgcagactgcttcacacagaggtgtctgtcactgaagatacatttt
gacctatatcagtgctgccatgcaagctgcactgacatcagtgagcagcgagcacagaga
agaacatggcaacacaacctcaaccatgaaatccagaggatcacactggaactgattgtc
aacatattcagggatgtcagctgtcatctgaactatgaacatcgggtgtttaacagtgag
gagttcctgaaaaccagagagccagctgaacagctgttttacaagatggtgttggagaca
cacattttccattcattcctcaaggatcgtctcaacaggaaaatggacaactttgcccga
atggaacttagtactcgttctgaaatgcagaagatgaagggtatggttgaaatcccacgc
agacccaccatgcaggagattcaagcccggaggaagagctcttttacagagagcaggctg
agtaagagattggggacgagccttccaaacctcggggatgaccaaactatcagcttccaa
aaaaacacactgctgaccgggatcgtcatatctgaccccgcagtgagaactctccctaag
ccggtaaatgtgtttaagctcccagatttcccagcctctctgtccttccactctgtccaa
agttactacagcgagctgatccagcagcttggcaaggccatcttctctgtccaaaatgag
aaccccaccctgttggccagattctactacttgcgcggtttcatcaacacattgtgttca
cgacggctggacgctcttgctgactttcagaacctctacaagaccgacaccgccatcttc
ccaacacagctggtcacatggctcatggattcactgcaccgagatgagagacagcaagcg
gacaggcgacctgaactcaagagactcatcctcaaggtgaagacggagaatgagaagctg
ttggtgcggcctgatgaccacgtcaagaagtttaagctaccacgaaagcatctgcatcag
gaagagtttgtgcgttgtgtccaggagtgtgggattgttaaggatgtagccaccatacac
cgtttatttgatgctctgactgatggccagccaaaaaaggtggaccctgaactcttcaaa
gttttctacaccttctggaaggagatggagatcgaggcacaagatgtcaacttgccctct
ggggttatagaccatcttgataacagcgagtgtgtttacaagttgtcgtcatgtgtcaag
acctcatatggcgttggtaaaattgccatgacgcagaaacgtctgttcttgcttactgag
ggacgaccgggcttcctggacataacaaagttcagggacatacaggaggtgaagattgct
tcagctccctttctacttcttcgtatcccttcacttcgtatccagacgtcccgcaggcct
gaggtgtttgaggccaacctgaagacagagactgaactctggaacctcgtggtgaaagag
atgtgggctggacgcaagatggccgaccaacacaaggatcctcagtacatgactcaagct
ctgaccaacgtcctattgatggatgctgtcacgggctgcctgcagacccagaggtccatc
attgctgcctcaaagctggcctactttgacaagatcaaacatgaagtgcctatgatggtg
cctaaaactacctcagagactctaaaacacaaaatcaacccgtcactggacctggctgaa
cctcagactgtacatgtccttctatacacaccaggtcacttgacttacaatgactcaggg
ggtatgatgaacccgaagctgtgggtggctctcagtgggggcaaagtagttgtgttcgat
gcagctagctggtccatgctgcaggactgcatccaggtcggagagtcacagctgaactgc
atgctgggattggtccaggagcaggtgtggattggctctcaggactcggtaatctacatc
attgacactcacagcatgtcctgcaacaaacagctgactgaacacagacatgaagtgact
ggactcactatggacaccagagatcaacacagcagtcagcagacatattcctgcagctgc
gatgggacgattctgcagtgggactcagccagtctcaaagtaaagcgacagttctacctc
agctgtgaccgtctctcttctatacagatccataatggcacactgtggtgctgttgtggt
gacagcattatggaactaaaaaagagtgggacaccacaaaaaaggatagcgcttcctgac
gacttccagagcatgtccagtagcttcagctgcttcatagtcatcccagagcgaggtcag
ttgtggacgggctgtgcagactcaggtgagctgtgtctctggcacactaacaaccacaga
catccatccaagagaatctccctgccgggcagttcaggggtcacctgtatgattcgcgtc
aaagaccagctctgggtgggctgtcgtggccgggctggtgtcggaggtcagtgcgatggt
cagctgagaagtcaggtgatggtgatggacccagagagccacactgtggcaaaggagctg
caggcccattcggacagcatccagacgctctgctctgccgaagatcgctatgtcctgagt
ggctctgcacgccgtgatggcaagattgccatctggaaagtggagtag
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