Larimichthys crocea (large yellow croaker): 104940363
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Entry
104940363 CDS
T04659
Symbol
itga8
Name
(RefSeq) integrin alpha-8
KO
K06584
integrin alpha 8
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04510
Focal adhesion
lco04512
ECM-receptor interaction
lco04514
Cell adhesion molecules
lco04810
Regulation of actin cytoskeleton
lco04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104940363 (itga8)
04514 Cell adhesion molecules
104940363 (itga8)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104940363 (itga8)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104940363 (itga8)
04810 Regulation of actin cytoskeleton
104940363 (itga8)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lco04515
]
104940363 (itga8)
Cell adhesion molecules [BR:
lco04515
]
Integrins
Integrin alpha subunits
104940363 (itga8)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Motif
Other DBs
NCBI-GeneID:
104940363
NCBI-ProteinID:
XP_027142064
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Position
XIII:17557287..17598870
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AA seq
1055 aa
AA seq
DB search
MERMWDCVSSAGMFILGVLSVLWPALNGVWSFNLYAEHPTVYRGPDGSYFGYSVDFYQAT
SDSNTISVLVGAPKANTSQPGVVEAGAVYYCPWPGSTDSCRQIPFDNSNNRMIKVNGTRE
PLEFKSHQWFGASVRTHKGKVVACAPLYHWRTVKLSGEKDPVGTCYVAVQNFSAYAEYSP
CRTNDPDPEGQGFCQAGFSVDFTKEGMLVVGGPGSFYWQGQVMTAGIAEILNGYSLKAVL
RRVPGEKHTRAAEETHDDSYLGYSVAVGEFTGDSEQELIAGVPRGAQNFGYVVMINSTNL
TFIQNFTGEQMASYFGYSVAVTDLNGDGTDDVLVGAPLYMEREMESKPKEVGRVYLYLQM
APLTFSIPVALTGMHTFGRFGTAIAPLGDINQDGYNDVAVGCPFGGEERGGRVLIFNGNK
DVSTRGLTMSQELKAAWTPSGSLPGYGFTLRGGQDLDNNQYPDLLLGAFGSGEVAVYRSR
AVVSVEASMILTPRILNPDDRQCHLPETDIMVTCLKVDVCAAVSGVGIPSSVDLRAELQL
DWLKGTRGGVKRVLFLDTQLPQRSGHLKLGHNRPHACLIYTIYLKEDDEFRDKLTPISLA
LNYSLAPPSHSQNLPPVLNHYSSTFLQEHAYILLDCGDDNICIPDLQLSASMDRSELVIG
DDNLVMLTITAVNRGEGAYETELHTLIPPEADYIGVKRKVESLSQLNCEYKMVNESRMVV
CDLGNPMVAGTELSVGLRFSVQRLEDAGPKISFELQIHSSNKDNSDSNPVSLNLSIAAKA
QLDLRGVSHPSQVVLPFPRWEPKEKPVKEEDVGPQVTHIYELHNSGPSSIQEAELQVGWP
SRFRDENLLYAMEIQTDGPISCKTNASLNPLSLQISSLQDTPELLGFLRNTSAPHQRHKR
AVTAAQSYSGKTLNCTNVSCLRIMCVVGRLDRGHSAVVKIRSRLWAHTFLQRRNDPYILN
STVSFMVIAMPYRIQPSILPKRTTSMGTMVLWGTPDVSFAVPLWVIILAILLGLLVLAIL
TLAMWKCGFFDRARPPADDDVSDQEQLTSDQTGDA
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atggagcgtatgtgggactgtgtttcctccgctgggatgtttattctcggggtgctgtcg
gtgctgtggccggcgctaaatggagtctggagttttaacctttacgcagagcatcctacg
gtttacaggggacccgatggaagttatttcggttattctgtggacttctaccaagctacc
agcgacagcaacacgatcagcgtgttggtgggggctccaaaggcgaacacctcccagcct
ggtgttgtggaggctggggccgtttactactgcccctggcctggaagcactgacagttgc
agacagataccttttgacaattctaataacagaatgataaaggtaaatggcaccagagag
cctctggagtttaagtcgcaccagtggtttggagcatcggtcaggacacacaaaggaaaa
gtggtggcatgtgctcctctctatcattggcggacagtgaagctgagtggggagaaggac
cccgttgggacctgctatgtagccgtccagaactttagtgcctacgcagaatactcaccc
tgcaggaccaatgatccagacccagagggacaggggttctgccaggctggcttcagtgtg
gatttcaccaaggaaggaatgctggtggtaggcggacctggaagcttttactggcaaggt
caagtaatgacagcagggatagctgagatactgaacggctactctttgaaggcagtgctg
agacgggtaccgggagagaaacacacaagagctgctgaggaaacacacgacgacagctac
cttggttactctgtggcagtgggagagtttacaggagactctgaacaagagctgatagcc
ggagtcccaagaggagcacagaactttggatatgtggtgatgatcaactccaccaacctg
accttcatccagaactttacaggggaacagatggcctcttattttggctactcagtggcg
gtcactgacctaaatggagatgggactgacgatgtgctggttggagcgcccctctacatg
gagagggagatggagagcaaacccaaagaggttggaagggtgtacctgtaccttcagatg
gccccgctcactttctccatacctgttgcccttaccggcatgcacacattcgggcgcttc
ggcacagctatagcacccctgggagacatcaaccaagatggatacaatgacgtggcggtg
ggctgtccgttcggaggtgaggagcgtggaggcagagtactgatctttaacggtaacaaa
gatgtatccacgagaggcctgacgatgagccaagagctgaaagcagcctggacccccagt
ggcagcttgcctggatatggatttactctgcgaggaggccaagacctcgacaacaatcag
tatcctgatctgttgctnggggcatttggctcaggcgaggtggcggtgtacagatctcga
gctgtagtttctgtggaagcttcaatgatcttgacccccagaatcctgaaccctgatgac
cgacagtgtcacctgcctgaaactgatattatggttacctgtctgaaggtggacgtgtgt
gcagcagtgagtggagtggggatccccagctctgtagacctaagagcagagctgcagctg
gattggttgaaaggcaccagaggcggagttaagagagttttattcctggacacccagctg
cctcagcggtcagggcatctaaagttgggtcacaaccgcccacatgcatgcctgatctac
accatttacctgaaagaggacgatgagttcagggacaaactgacccctatatcactggct
ctgaactacagcttggctccaccctctcatagtcaaaaccttccacctgtacttaaccat
tacagcagcaccttccttcaagagcatgcctacatcctcctggactgcggtgacgacaat
atttgtatccctgacctccagctctctgccagcatggaccgctcagagctggtgattgga
gacgacaatctggtcatgttgaccatcactgcggtgaaccgaggagagggggcctatgaa
acagagctccacacgctgataccaccagaggctgactatatcggagtgaagcgcaaggtg
gagtccctgtctcaactaaactgcgagtacaagatggtcaatgagtccaggatggtggtg
tgtgacctcgggaacccaatggtggctgggacagagctgtcggttggtttgaggttttct
gtccagaggctggaagatgctggaccaaagatcagctttgagctacagatccacagctcc
aacaaagataactccgacagcaacccagtcagtttgaatctgtccatcgctgccaaagct
caactcgatttacgcggggtgtctcatccctctcaggtggtgctgccattcccacgctgg
gaacccaaagagaaacctgtcaaagaggaggatgtggggccacaagtaacacacatctat
gagctccataactctggtcccagcagtattcaggaggctgagctccaggtcggctggcct
tcccgtttccgtgacgagaacctgctctatgccatggagattcaaactgacggaccaatt
agctgcaagacgaatgccagcctcaacccactcagccttcagatttcctctctccaagac
acacctgagttactgggtttcttgaggaacaccagcgctcctcatcagcgccacaaacga
gcagtgactgccgctcagagctacagcggtaaaactttgaactgcacaaatgtctcctgt
ctgaggatcatgtgcgtggttggccggttggatcgtgggcacagtgcagtggtcaagatc
cgctcgaggctgtgggcgcatactttcctgcagcggcgtaatgacccctacattctcaac
tcgactgtgtccttcatggtcatagccatgccttaccgcatccaaccctccatcctgcct
aaacgcaccacctcgatgggaaccatggtgttatgggggactccagatgtgtcatttgct
gttccactctgggtcatcatcctcgccatactgctggggctgctggtgctggctatatta
acattagccatgtggaagtgtggtttcttcgaccgggcgcggccaccagctgacgatgac
gtctctgaccaggagcagctgacttctgatcaaacaggggacgcctaa
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