Larimichthys crocea (large yellow croaker): 104940424
Help
Entry
104940424 CDS
T04659
Name
(RefSeq) iroquois-class homeodomain protein irx-1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lco03000
]
104940424
Transcription factors [BR:
lco03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
104940424
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
104940424
NCBI-ProteinID:
XP_027141903
LinkDB
All DBs
Position
XIII:21662364..21666110
Genome browser
AA seq
475 aa
AA seq
DB search
MSFPQLGYPQYLSASQAVYGSERPGVLTPSSRGGSTEIGGSPSATAAAVTSVLGMYANPY
AHNYSAFLPYTSADLALFSQMGSQYELKDSPGVHPASFAAHTSPAFYPYGQFQYGDPARP
KNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKV
TWGSRSKEDGEENLFGSGDEAEKNEDEEEIDLESIDIDKIDDNDGDQSNEDDDDKSTEGS
RDHRGGVGAGGELDSLERRRAFALQAHEAFDKSKSTISVHPGSKENSDGNNNNTRVLSPD
RPGSFPLPSNNKPKIWSLAETATSPDSSSQKPTSPCAPAATTHSSAPHHQIQTHPAFLPS
HGLYTCQIGKFHNWTNGAFLGQNSLLNVRSFLGVNQHHHHHHHHNHHLSAQQQQQQQQPT
SVVVSPVAAAAALSNDSKAPSETHSPKHIDHENGVRSDSPPTQTLKSSFRPIHDR
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccccagctaggctacccgcagtacttaagtgcctcccaggcggtgtacggg
agcgagagaccgggagtgcttacgccttcgtcccggggagggagcactgaaatcggggga
agtccgtccgccaccgcagctgcggtcacgtcggtgttgggcatgtacgccaacccgtac
gcacacaactacagcgctttcttaccgtataccagcgcggacttggctcttttctcacaa
atggggtcccagtatgagctgaaggacagtcctggtgtccatcctgccagcttcgcagca
cacacatctccggccttctatccatacggccagtttcagtacggggatccagccaggccc
aagaacgccacccgggagagcaccagcaccctgaaagcctggctcaatgagcacaggaag
aacccgtatccgaccaagggggagaagatcatgcttgccatcatcaccaaaatgacgctg
acgcaagtctcaacatggttcgccaacgccaggaggaggctcaagaaggagaacaaggtg
acctggggaagcaggagcaaagaggacggggaggagaacttgttcggcagtggagacgag
gccgagaaaaacgaagacgaggaggagattgatttggagagcatagatatagacaaaata
gacgacaacgacggggatcaaagcaacgaggatgatgacgataaatcaacggaggggagc
agggaccacaggggcggtgtcggtgcggggggagagttggacagcttggagagaagacgg
gccttcgccctacaggcccatgaggcctttgacaaatctaagagcacaatttcagttcac
ccagggagtaaggagaactcggacggcaacaacaacaacacaagagttttgtctccggat
agacccgggagctttcctctcccttctaacaataagcccaaaatttggtctttagcagaa
accgccactagtcctgatagttcatctcagaaacccacatccccttgtgccccagcggcc
accactcactcatcagcgccccaccaccagatccaaacccacccggctttcctccctagt
catggactgtacacatgccagattggaaagttccacaactggacaaacggggctttcttg
ggccagaactccctgctgaatgtgaggtcgtttctgggagtaaaccagcaccatcaccat
caccatcaccacaaccaccacttgtcggcccagcagcagcagcagcagcagcagccgacg
tcagtggtagtgtcgccggtagcagctgcagcagcactcagcaatgacagcaaggccccg
tcagagacccacagtcccaagcacatagaccatgaaaacggtgtaaggtctgactcccct
ccaacacagaccctgaagtcttcctttcgacccatccatgacaggtga
DBGET
integrated database retrieval system
