Larimichthys crocea (large yellow croaker): 104940434
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Entry
104940434 CDS
T04659
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 16
KO
K08630
a disintegrin and metalloproteinase with thrombospondin motifs 16 [EC:3.4.24.-]
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lco01002
]
104940434
Peptidases and inhibitors [BR:
lco01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
104940434
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Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
Reprolysin
ADAMTS_spacer1
TSP_1
Pep_M12B_propep
ADAMTS_CR_2
Reprolysin_5
PLAC
TSP1_spondin
Reprolysin_2
Reprolysin_3
TSP1_CCN
ADAMTS_CR_3
Reprolysin_4
Motif
Other DBs
NCBI-GeneID:
104940434
NCBI-ProteinID:
XP_010755341
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Position
XIII:21827796..21879277
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AA seq
1313 aa
AA seq
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MAFLLICAGWRNRTRPLLLFYLFCFVTLSKSVLMNDGADSNESHQEASTLLRSLNLPQHT
EYEIVSPYEVNDQGVYISHEVAHHQRRRRRRSLTPDADSSTTESSSETVHFWLSGLGQDF
HMELREASESLIAPGFTIQVLGKNGTKSLRAYHQDDLCFYQGSLRSRVNSSVALSTCMGM
SGLIRTKDADYFLRPVSRSLAQRENFTAPSSHQPHILYKSERGTQTEPRVLQKRSTNSTH
HKSHGHFVTKRSTNSQTDSTYNTVNEDQHRGQQKEQGDIHGHPHGNDNNNSHGDQMEHHD
SSHRHDNVDYRRGEKQRQHFCGRRKKYMPKPPEGDVFILPDEYKFIPRNKRAVLTKNQGN
QKLNVEMLVVVDRKMMDNHGHENITTYVLTVLNMVSSLFKDGTIGGNINIVIVGLVLLDE
EQDGLVISHHADHTLNSFCHWQSTLGGREGRHHDHAILLTGLDICSWKNEPCDTLGFAPI
SGMCSKYRSCTINEDTGLGLAFTIAHESGHNFGMVHDGEGNVCKKSEGNIMSPTLAGHNG
VFSWSACSRQYLSRFLNSAQALCLSDEPKAVKEYRYPEKLPGELYDADTQCKWQFGEKAK
LCTLDFKKDICKALWCHRVGRKCETKFMPAAEGSACGPDMWCRRGQCVKQGDEGPRPQHG
LWSEWSSWSACSRSCESGVTYRERQCNNPRPAYGGKFCEGSSRSYKLCNTEDCPLNTTDY
RAQQCAEFNSKQFRGWYYTWRPYTRVDDQDVCKLYCFAEGYDFFFALASKVKDGTLCSQD
SSNVCIDGLCERVGCDRVLGSTAVPDACGVCKGDNSTCKIYKGLYSKQHYTNQYYGVVTI
PAGARSIRVMELNTSSSYLAVRDTQRHYYLNGHWTVDWPGRHPIAGAIFEYKRPYNRPES
LIATGPINETLVIEILLQGWNPGVRWEYTLKKADEKRHHIKHNYTWAIIRSQCSATCAGG
QMNTKSACYKDLRVQVNTSYCNPRSRPATGLMPCNTQPCPASWSVGEWGVCSRSCGGGEQ
TRQVQCVQRTSQTNVDALADSRCAQPTPTRRQACNTHSCPPVWTTGPWSQCSRKCGNGLR
KRTVHCTSTNPGAQMQTQPDSLCAGLPKPASQESCFIKRCQKQRKVQWFVSTWQECSVTC
GHGYQARFIKCAEKDTAGKYRELAAKKCHHVPKPTVELQRPCTMAECPVRTTPPVHRWNT
YHRTYPPQPLPHPPPRAEWRTSPWSQCTVTCGGGVQARTVQCLVQGKPSSGCALHLKPSM
SQACNTNFCPQPEKKDLACRDYFNWCYLVPQHGVCNHKFYGKQCCQSCSNSNL
NT seq
3942 nt
NT seq
+upstream
nt +downstream
nt
atggctttcttgctgatttgcgcagggtggagaaacaggacgcggccgttgctccttttc
tatctcttttgctttgtcacactgagcaaaagcgtgcttatgaatgatggcgctgacagc
aatgaatctcatcaagaagcatcgaccctgcttcggtctcttaatttacctcaacacaca
gaatatgagattgtatctccttatgaggtcaacgaccaaggtgtttacatctctcatgaa
gtggcccatcaccagcgcaggagacgacgcagatccctgaccccagatgcagactcatca
accactgagagcagcagcgaaactgtccatttctggttgagtggcttggggcaggacttc
cacatggagctgagggaggcctcagagagtcttattgcacctggcttcaccatccaggtc
ctgggaaagaatggcaccaaaagcctgagggcctaccaccaggacgacctctgcttttac
caggggtcactgaggtcaagggtcaactcctctgtggcactgtccacatgcatgggaatg
tcaggtttaatcagaacaaaggatgcagactacttcctgagaccagtgtcccgcagcctt
gctcagagagagaacttcacagcaccctccagtcatcagccacacatcctctacaagagc
gagaggggcacccagacagagcctcgggtacttcagaagagatccacaaattcaactcat
cacaaatcacacggacactttgttaccaagagatccacaaattcacagacagactccacc
tacaacacagttaatgaagatcaacacaggggccagcaaaaagagcaaggtgacatccat
ggtcatccccatggcaatgataacaataacagtcacggtgaccagatggagcatcatgac
agcagccatcgccatgacaatgtcgactacagacgtggcgagaagcagaggcaacatttc
tgcgggagacggaagaaatacatgcccaaacctccagaaggagatgtcttcatccttcca
gatgaatataagttcatacccaggaataaaagagctgtgttaacgaagaaccagggcaat
cagaagctcaacgtggagatgctggtggtggtggacaggaagatgatggataaccacggc
catgagaacattaccacttatgttctcactgtgcttaatatggtctccagtctcttcaaa
gacggcacgataggagggaacatcaacatagtgatagtgggcctcgtgcttctggatgaa
gagcaggatggtttggtgatcagccaccatgcagaccacacactgaacagcttttgccac
tggcagtcaaccctgggaggcagagagggccgacaccatgaccacgccatcctcctcaca
ggacttgacatctgctcttggaagaatgaaccctgtgacactcttggttttgctccaatc
agtggaatgtgcagcaagtaccggagctgtaccattaatgaggacacaggcttgggtctg
gcattcactatcgcccatgaatctggacacaattttggaatggtccatgatggtgaaggg
aacgtttgtaagaagtcagagggcaacatcatgtcacccacattggccggccacaatgga
gtcttctcctggtctgcttgcagccgccagtacctcagccgcttcctcaactccgcccag
gctctgtgcttatcagatgaacccaaagcagttaaggagtatcggtaccctgagaagctg
cctggcgagctgtacgatgccgacacacagtgtaaatggcaatttggggagaaggccaaa
ctctgcaccctcgactttaagaaggatatctgcaaggctctgtggtgccaccgtgttggg
aggaagtgtgagaccaagttcatgccagctgctgaaggctctgcctgtggccctgatatg
tggtgtcgtaggggccagtgtgtgaaacaaggtgacgagggcccgaggcctcagcatggc
ctgtggtcagagtggtcgtcctggtctgcatgctcacgaagctgtgagagtggagtcacc
tatcgagagaggcaatgcaacaaccccagacctgcatatggaggaaagttctgtgagggt
tcctccaggtcatacaaactttgtaacactgaggattgtcccctcaacaccactgactac
agagcacagcagtgtgcagagttcaacagcaaacagttcagaggatggtactacacctgg
aggccatatactcgagttgatgatcaagatgtatgtaagctgtactgctttgctgaaggc
tatgatttcttctttgccctagctagcaaagttaaggatgggactctctgctcacaggac
agttctaacgtctgtattgacggactgtgtgagagagtgggctgtgaccgtgttttgggc
tccacagctgtgcctgatgcttgtggggtgtgtaaaggagacaactccacctgcaagatc
tacaaaggattgtacagcaagcagcattatactaaccagtactatggggtggtaaccatc
ccggcaggggctcggagtatccgtgtgatggaactgaatacatccagctcctacctggct
gtcagggacacccagagacactattacctgaacggacactggacggtagactggccaggc
agacaccccatcgctggagccatttttgagtacaagagaccctacaacagaccagagagc
ctcatagcaactggccccatcaatgagacactggtcatagagatattgttgcagggctgg
aacccaggtgtacgttgggaatacactctgaagaaagctgatgagaaaaggcatcacatc
aaacacaattatacatgggccatcatacgctctcagtgttcagcaacttgtgccggaggc
cagatgaacaccaagtcagcatgctacaaagacttgagagtgcaggtgaatacatcctac
tgcaatcccagatcaagaccagctactggactgatgccctgcaacacccaaccatgtcct
gccagctggtctgtaggagagtggggggtgtgcagccggagctgtggaggaggggagcag
acgcggcaggttcagtgcgtccagagaaccagccagaccaacgtagacgccctggctgac
tctcgctgtgcccagcccaccccgaccagaaggcaagcctgcaacacacacagctgtcca
ccagtttggaccactgggccgtggtcacagtgctctcgtaagtgtggcaacggcttgagg
aagaggacagtgcattgtacaagcaccaacccaggtgcccagatgcaaacacagccagac
agtctgtgtgcgggcctgccaaaacccgccagtcaagaatcctgtttcatcaaacgctgc
cagaaacaacgcaaagtccagtggtttgtctccacatggcaagagtgttcagtaacatgt
ggccatggctaccaggcacgcttcattaagtgtgcagagaaggacactgcaggaaaatac
agagagcttgcagccaagaagtgccatcatgtccccaagcccacagtggagctccagagg
ccctgcaccatggccgagtgccctgtccgcactaccccaccagtccaccgatggaacacg
tatcatcgcacctatccacctcaacccctccctcatcctccgccccgagctgaatggcgc
acatctccttggtctcagtgcacagtgacatgtggagggggagtgcaggccaggacggtc
caatgtctggtccaagggaagccctcctctggctgtgccctccatcttaaaccttcaatg
tcccaggcctgcaacaccaacttctgtccacaacctgagaagaaagaccttgcgtgtagg
gattacttcaactggtgttacctggtaccccagcatggagtctgcaatcacaagttctat
ggcaagcagtgctgccagtcctgttcaaattcaaacctataa
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