Larimichthys crocea (large yellow croaker): 104940435
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Entry
104940435 CDS
T04659
Symbol
irx2
Name
(RefSeq) iroquois-class homeodomain protein IRX-2
KO
K24889
iroquois-class homeodomain protein IRX
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lco03000
]
104940435 (irx2)
Transcription factors [BR:
lco03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
104940435 (irx2)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
104940435
NCBI-ProteinID:
XP_019121884
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Position
XIII:complement(21528860..21534754)
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AA seq
516 aa
AA seq
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MSYPQGYLYQPPGSLALYSCPAYGASALAAPRNEDLARSSSGSAFSPYPGSAAFSASAGA
GFSSPLSYSTDPTTGFPSYMSSPYDAHTTGMAGALSYHPYGSPGYPYQLNDPAYRKNATR
DATATLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPR
NKSEDEDEEDGDGERKEVERSDKTLDNSEASAEDEGISLHVDTLTDHSCSAESDGEKVSC
RVGELGSDRAGDKCDEDGDDQDHDPRPQLSPKPVTSSPLTGVEAPVLSHHQHHHHHHLHQ
LHHLHSQREDLARSLVNNNNINTNKSSSCLDSRPSSGPPQNPTVKPKLWSLAEIATSDQK
QQHQQLGQPGQLNCPSSSGGLLTPSTPSTTSPTASSPSLYPTPSILGRPIYYTSPFYSNY
TNYGNFSPLQGQGILRYTNSSGVSLAAAAAAAAAAAAAANEGLSSSHQALEASTNPKHRP
DSPLVKHNPNQIVVVEQQQQQQQHFRAANLEAKKGT
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcctcagggttacctctaccagcccccgggctctctggctctttattcgtgt
ccggcttacggggcctcggctctggctgccccgcggaatgaagacttggcgaggtcgtcg
tctggctcagccttcagtccttaccctggatcggctgctttctccgcctcggctggggca
ggcttctccagtccgctgtcatactccacagatcccacgacgggattcccatcgtacatg
agctctccatatgacgcgcacacgacgggcatggccggagcattgagttaccacccatac
gggagtccagggtacccctaccaactcaacgacccggcttaccgcaaaaacgccaccagg
gacgccacggccaccctgaaggcctggctgcaggagcacaggaagaacccgtacccgaca
aaaggagagaagatcatgctggccatcattactaagatgaccctgacgcaggtctccaca
tggttcgccaacgccaggcggaggctcaagaaagagaacaagatgacctgggcgcccagg
aataagagcgaagacgaggacgaggaggacggagacggggagaggaaagaggtggagcgc
tctgacaaaaccctggataacagcgaggcttcagcggaggatgaaggtatcagcttgcac
gtcgacaccctgacggaccactcctgctctgcagagtctgacggggagaaggtcagctgt
cgtgtgggagagctgggctcagaccgggccggcgataaatgcgacgaggacggcgatgat
caggaccacgacccacggccacaactctcgcccaaacccgtcacatcgtcgcccctaacg
ggagtagaggctccagttctcagccatcaccaacatcaccaccaccaccacctccatcaa
ctccaccatctccacagccagcgcgaggatttggcccggagcctcgtcaataacaacaat
attaacaccaataaatcgtcttcatgccttgacagcagaccttcttcggggccgcctcag
aaccctacagtcaagcccaaattgtggtcgctggcggagattgctacctcggaccaaaag
cagcaacatcagcaactggggcagcctgggcaactaaattgcccctcctccagcggtggc
ctccttaccccctctacgccttccaccacctccccgactgccagttccccctccctctac
ccgaccccctccatccttggaagacctatttattacacttctcccttttatagcaattac
acaaactatggcaacttcagccccctgcagggccaagggatcctgcggtatactaattca
tccggagtgagtctggctgctgccgccgccgctgccgccgccgccgctgctgcagcaaac
gagggtctgagctcctctcaccaggctctggaggcgagcacaaaccccaaacacaggcca
gactcccccctcgttaaacataacccaaaccagattgttgttgtcgagcagcagcagcag
caacagcagcatttcagagccgcaaatttagaagcaaagaaaggtacgtaa
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